Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2301 Trifolium pratense HOM05D002529 ORTHO05D048888 4.6e-219 764.2 374 100.0
Medtr7g086210 Medicago truncatula HOM05D002529 ORTHO05D048888 8.8e-53 211.8 357 43.7
Medtr6g012740 Medicago truncatula HOM05D002529 ORTHO05D002664 1.7e-11 74.7 266 26.7
Lj1g0004297 Lotus japonicus HOM05D002529 ORTHO05D002664 8.3e-11 72.4 134 37.3
Aqoxy2G03402 Aquilegia oxysepala HOM05D002529 ORTHO05D002664 1.1e-10 72.0 114 36.0
Cfa007075 Carpinus fangiana HOM05D001516 ORTHO05D001357 1.1e-10 72.0 120 31.7
Ca_23953_v3 Cicer arietinum L. HOM05D002529 ORTHO05D002664 1.1e-10 72.0 125 33.6
Ca_23959_v3 Cicer arietinum L. HOM05D002529 ORTHO05D002664 1.1e-10 72.0 125 33.6
Lj4g0005583 Lotus japonicus HOM05D002529 ORTHO05D002664 1.4e-10 71.6 124 33.1
Potri.005G047901 Populus trichocarpa HOM05D002529 ORTHO05D002664 2.4e-10 70.9 127 34.6
Manes.08G120700 Manihot esculenta HOM05D002529 ORTHO05D002664 7.0e-10 69.3 115 33.0
Atru.chr2.663 Acer truncatum HOM05D002529 ORTHO05D002664 2.7e-09 67.4 114 35.1
Prupe.6G337800 Prunus persica HOM05D002529 ORTHO05D002664 2.7e-09 67.4 121 35.5
CSS0013639 Camellia sinensis var. sinensis HOM05D002529 ORTHO05D002664 3.5e-09 67.0 112 33.9
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 4.5e-09 66.6 106 38.7
Sed0014372 Sechium edule HOM05D002529 ORTHO05D002664 5.9e-09 66.2 121 32.2
Medtr7g085465 Medicago truncatula HOM05D002529 ORTHO05D048885 1.3e-08 65.1 134 32.1
QL08p059718 Quercus lobata HOM05D002529 ORTHO05D002664 1.7e-08 64.7 129 32.6
ClCG05G009860 Citrullus lanatus HOM05D002529 ORTHO05D002664 2.3e-08 64.3 123 32.5
Glyma.19G009300 Glycine max HOM05D002529 ORTHO05D002664 2.3e-08 64.3 130 33.1
vmacro19828 Vaccinium macrocarpon HOM05D002529 ORTHO05D002664 2.3e-08 64.3 107 34.6
arahy.Tifrunner.gnm1.ann1.2EE7P6 Arachis hypogaea HOM05D002529 ORTHO05D002664 3.9e-08 63.5 130 30.8
arahy.Tifrunner.gnm1.ann1.418MG4 Arachis hypogaea HOM05D002529 ORTHO05D002664 3.9e-08 63.5 130 30.8
arahy.Tifrunner.gnm1.ann1.G3F6T9 Arachis hypogaea HOM05D002529 ORTHO05D002664 3.9e-08 63.5 130 30.8
Glyma.13G169100 Glycine max HOM05D002529 ORTHO05D002664 3.9e-08 63.5 130 32.3
Psat2g156040 Pisum sativum HOM05D002529 ORTHO05D002664 3.9e-08 63.5 109 31.2
Hund06996 Selenicereus undatus HOM05D002529 ORTHO05D002664 3.9e-08 63.5 114 30.7
Nn1g02343 Nelumbo nucifera HOM05D002529 ORTHO05D002664 5.0e-08 63.2 124 30.6
VMungo1383G2706 Vigna mungo HOM05D002529 ORTHO05D002664 5.0e-08 63.2 130 32.3
Medtr7g109770 Medicago truncatula HOM05D003034 ORTHO05D048885 6.6e-08 62.8 111 38.7
Nn5g28120 Nelumbo nucifera HOM05D002529 ORTHO05D002664 6.6e-08 62.8 124 29.8
VMungo0251G2818 Vigna mungo HOM05D002529 ORTHO05D002664 6.6e-08 62.8 126 32.5
Cpa.g.sc114.63 Carica papaya HOM05D002529 ORTHO05D002664 8.6e-08 62.4 111 33.3
Eucgr.H04397 Eucalyptus grandis HOM05D002529 ORTHO05D002664 8.6e-08 62.4 109 32.1
Potri.013G035000 Populus trichocarpa HOM05D002529 ORTHO05D002664 8.6e-08 62.4 108 34.3
TPR.G33676 Trifolium pratense HOM05D002529 ORTHO05D002664 1.1e-07 62.0 126 30.2
Ciclev10002511m.g Citrus clementina HOM05D002529 ORTHO05D002664 1.5e-07 61.6 112 33.0
RcHm_v2.0_Chr1g0334081 Rosa chinensis HOM05D002529 ORTHO05D002664 1.9e-07 61.2 148 31.1
CiPaw.08G178400 Carya illinoinensis HOM05D002529 ORTHO05D002664 2.5e-07 60.8 115 33.9
MD03G1029600 Malus domestica HOM05D002529 ORTHO05D002664 2.5e-07 60.8 110 35.5
Solyc01g096760.3 Solanum lycopersicum HOM05D002529 ORTHO05D002664 2.5e-07 60.8 112 33.0
Sopen01g040470 Solanum pennellii HOM05D002529 ORTHO05D002664 2.5e-07 60.8 112 33.0
MD04G1217800 Malus domestica HOM05D002529 ORTHO05D002664 3.3e-07 60.5 110 34.5
Peaxi162Scf00220g00008 Petunia axillaris HOM05D002529 ORTHO05D002664 3.3e-07 60.5 108 32.4
Rhsim05G0150200 Rhododendron simsii HOM05D002529 ORTHO05D002664 3.3e-07 60.5 120 29.2
DCAR_018312 Daucus carota HOM05D002529 ORTHO05D002664 4.3e-07 60.1 109 35.8
Medtr8g043450 Medicago truncatula HOM05D002529 ORTHO05D002664 4.3e-07 60.1 122 30.3
Peaxi162Scf00220g00009 Petunia axillaris HOM05D002529 ORTHO05D002664 4.3e-07 60.1 112 34.8
ATR0697G145 Amborella trichopoda HOM05D002529 ORTHO05D002664 5.6e-07 59.7 114 31.6
ClCG11G014280 Citrullus lanatus HOM05D002529 ORTHO05D002664 5.6e-07 59.7 105 34.3
Prupe.6G025700 Prunus persica HOM05D002529 ORTHO05D002664 5.6e-07 59.7 110 35.5
Lalb_Chr04g0264001 Lupinus albus HOM05D002529 ORTHO05D002664 7.3e-07 59.3 118 30.5
PSO761G0286 Papaver somniferum HOM05D002529 ORTHO05D002664 7.3e-07 59.3 145 29.0
Thecc.05G290400 Theobroma cacao HOM05D002529 ORTHO05D002664 7.3e-07 59.3 113 33.6
Glyma.18G147100 Glycine max HOM05D002529 ORTHO05D002664 9.5e-07 58.9 131 32.1
Dinv05119 Davidia involucrata HOM05D002529 ORTHO05D002664 1.2e-06 58.5 113 31.9
Phvul.003G288900 Phaseolus vulgaris HOM05D002529 ORTHO05D002664 1.2e-06 58.5 130 30.0
ATR0730G133 Amborella trichopoda HOM05D002529 ORTHO05D002664 1.6e-06 58.2 113 30.1
CsaV3_3G047670 Cucumis sativus L. HOM05D002529 ORTHO05D002664 1.6e-06 58.2 111 29.7
arahy.Tifrunner.gnm1.ann1.DGU1VQ Arachis hypogaea HOM05D002529 ORTHO05D002664 2.1e-06 57.8 130 28.5
Medtr8g043410 Medicago truncatula HOM05D002529 ORTHO05D002664 2.1e-06 57.8 116 34.5
CiPaw.07G007900 Carya illinoinensis HOM05D002529 ORTHO05D002664 3.6e-06 57.0 113 31.9
Sed0025735 Sechium edule HOM05D002529 ORTHO05D002664 3.6e-06 57.0 108 32.4
Actinidia33839 Actinidia chinensis HOM05D002529 ORTHO05D002664 4.7e-06 56.6 133 30.8
arahy.Tifrunner.gnm1.ann1.2T97DK Arachis hypogaea HOM05D002529 ORTHO05D002664 4.7e-06 56.6 130 27.7
arahy.Tifrunner.gnm1.ann1.A0H8UL Arachis hypogaea HOM05D002529 ORTHO05D002664 4.7e-06 56.6 130 27.7
arahy.Tifrunner.gnm1.ann1.EKEG73 Arachis hypogaea HOM05D002529 ORTHO05D002664 4.7e-06 56.6 130 27.7
BcaNung04257 Brassica carinata HOM05D002529 ORTHO05D002664 4.7e-06 56.6 109 27.5
Medtr1g035200 Medicago truncatula HOM05D002529 ORTHO05D002664 4.7e-06 56.6 112 35.7
Nn6g34079 Nelumbo nucifera HOM05D002529 ORTHO05D002664 4.7e-06 56.6 111 29.7
TWI12G0397 Tripterygium wilfordii HOM05D002529 ORTHO05D002664 4.7e-06 56.6 109 33.9
TWI12G0415 Tripterygium wilfordii HOM05D000460 ORTHO05D000333 4.7e-06 56.6 109 33.9
BcaC04g23704 Brassica carinata HOM05D002529 ORTHO05D002664 6.1e-06 56.2 103 28.2
BraA06t26698Z Brassica rapa HOM05D002529 ORTHO05D002664 6.1e-06 56.2 109 27.5
Lsat_1_v5_gn_2_115920 Lactuca sativa HOM05D002529 ORTHO05D002664 6.1e-06 56.2 146 26.0
RcHm_v2.0_Chr5g0076411 Rosa chinensis HOM05D002529 ORTHO05D002664 6.1e-06 56.2 111 32.4
Aa31LG11G8810 Aethionema arabicum HOM05D002529 ORTHO05D002664 8.0e-06 55.8 113 28.3
Medtr8g043430 Medicago truncatula HOM05D002529 ORTHO05D002664 8.0e-06 55.8 123 29.3


User provided reference genes

Program Settings