Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22965 Trifolium pratense HOM05D002027 ORTHO05D007928 1.1e-110 403.3 202 100.0
Psat6g021720 Pisum sativum HOM05D002027 ORTHO05D007928 7.0e-73 277.7 204 70.6
Ca_13117_v3 Cicer arietinum L. HOM05D002027 ORTHO05D007928 2.9e-71 272.3 211 69.2
Medtr1g015700 Medicago truncatula HOM05D002027 ORTHO05D007928 1.2e-64 250.4 203 66.5
Lalb_Chr14g0366421 Lupinus albus HOM05D002027 ORTHO05D007928 4.0e-44 182.2 210 51.9
Lj5g0014128 Lotus japonicus HOM05D002027 ORTHO05D007928 2.2e-42 176.4 215 50.2
arahy.Tifrunner.gnm1.ann1.82L1EP Arachis hypogaea HOM05D002027 ORTHO05D007928 1.1e-38 164.1 222 46.8
arahy.Tifrunner.gnm1.ann1.AYFT4X Arachis hypogaea HOM05D002027 ORTHO05D007928 1.1e-38 164.1 222 46.8
Glyma.17G226600 Glycine max HOM05D002027 ORTHO05D007928 3.6e-37 159.1 210 48.1
VMungo0647G0809 Vigna mungo HOM05D002027 ORTHO05D007928 4.8e-37 158.7 206 48.5
Glyma.14G098100 Glycine max HOM05D002027 ORTHO05D007928 2.9e-34 149.4 210 45.7
Phvul.001G037700 Phaseolus vulgaris HOM05D002027 ORTHO05D007928 1.1e-33 147.5 211 46.9
CSS0048827 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D007928 1.4e-25 120.6 216 37.5
Cfa017863 Carpinus fangiana HOM05D000120 ORTHO05D007928 1.6e-24 117.1 216 38.9
Duzib168G1118 Durio zibethinus HOM05D002027 ORTHO05D007928 3.5e-24 115.9 220 38.2
Manes.03G054000 Manihot esculenta HOM05D002027 ORTHO05D007928 4.6e-24 115.5 217 37.3
Haze_18309 Corylus avellana HOM05D002027 ORTHO05D007928 6.0e-24 115.2 216 38.4
Potri.006G219600 Populus trichocarpa HOM05D002027 ORTHO05D007928 4.3e-22 109.0 215 36.7
Potri.018G048500 Populus trichocarpa HOM05D002027 ORTHO05D007928 4.3e-22 109.0 214 34.6
Thecc.09G064800 Theobroma cacao HOM05D002027 ORTHO05D007928 4.3e-22 109.0 217 35.9
CANSAT25G2836 Cannabis sativa HOM05D002027 ORTHO05D007928 5.6e-22 108.6 215 34.9
Actinidia25687 Actinidia chinensis HOM05D002027 ORTHO05D007928 1.3e-21 107.5 215 33.5
Gohir.D06G079600 Gossypium hirsutum HOM05D002027 ORTHO05D007928 1.6e-21 107.1 222 38.3
Gorai.010G092800 Gossypium raimondii HOM05D002027 ORTHO05D007928 1.6e-21 107.1 222 38.3
Sabra06G0169500 Salix brachista HOM05D002027 ORTHO05D007928 2.1e-21 106.7 215 34.9
Prupe.1G403200 Prunus persica HOM05D002027 ORTHO05D007928 8.1e-21 104.8 213 36.2
Gohir.A06G080100 Gossypium hirsutum HOM05D002027 ORTHO05D007928 1.8e-20 103.6 222 37.4
TAR636G2984 Trochodendron aralioides HOM05D002027 ORTHO05D007928 5.3e-20 102.1 213 36.2
RcHm_v2.0_Chr6g0311981 Rosa chinensis HOM05D002027 ORTHO05D007928 9.0e-20 101.3 216 36.1
TWI34G0836 Tripterygium wilfordii HOM05D002027 ORTHO05D007928 1.2e-19 100.9 201 38.8
Dinv22945 Davidia involucrata HOM05D002027 ORTHO05D007928 1.5e-19 100.5 207 34.8
Sabra18G0046200 Salix brachista HOM05D002027 ORTHO05D007928 3.4e-19 99.4 214 35.0
DCAR_003721 Daucus carota HOM05D002027 ORTHO05D007928 1.0e-18 97.8 211 33.6
FAN20G1907 Fragaria x ananassa HOM05D000120 ORTHO05D000068 1.7e-18 97.1 217 35.5
Rhsim06G0100500 Rhododendron simsii HOM05D002027 ORTHO05D007928 1.7e-18 97.1 217 36.4
FvH4_2g30870 Fragaria vesca HOM05D002027 ORTHO05D007928 3.8e-18 95.9 217 35.0
FAN27G2495 Fragaria x ananassa HOM05D002027 ORTHO05D007928 4.9e-18 95.5 214 35.0
Oeu024212.1 Olea europaea HOM05D002027 ORTHO05D007928 8.4e-18 94.7 201 37.3
CiPaw.16G067400 Carya illinoinensis HOM05D002027 ORTHO05D007928 1.4e-17 94.0 206 35.0
Oeu024211.1 Olea europaea HOM05D002027 ORTHO05D007928 1.9e-17 93.6 201 37.3
Atru.chr7.1835 Acer truncatum HOM05D002027 ORTHO05D007928 3.2e-17 92.8 208 31.2
TWI63G1127 Tripterygium wilfordii HOM05D002027 ORTHO05D007928 2.7e-16 89.7 220 33.6
Cpa.g.sc126.10 Carica papaya HOM05D002027 ORTHO05D007928 3.5e-16 89.4 157 37.6
Sc06g0000160 Simmondsia chinensis HOM05D002027 ORTHO05D007928 3.5e-16 89.4 198 32.8
FAN24G3017 Fragaria x ananassa HOM05D002027 ORTHO05D007928 7.9e-16 88.2 224 34.4
MBI19_g44268_MAGBIO Magnolia biondii HOM05D002027 ORTHO05D007928 7.9e-16 88.2 207 31.9
vmacro12513 Vaccinium macrocarpon HOM05D002027 ORTHO05D007928 1.3e-15 87.4 221 33.5
ClCG05G015810 Citrullus lanatus HOM05D002027 ORTHO05D007928 1.8e-15 87.0 200 34.0
MD15G1048900 Malus domestica HOM05D002027 ORTHO05D007928 1.8e-15 87.0 178 36.0
TPR.G13059 Trifolium pratense HOM05D002027 ORTHO05D007928 1.5e-14 84.0 42 92.9
MSTRG.11630 Avicennia marina HOM05D002027 ORTHO05D007928 1.9e-14 83.6 202 31.2
Ciclev10008420m.g Citrus clementina HOM05D002027 ORTHO05D007928 1.9e-14 83.6 209 29.2
Migut.A00065 Erythranthe guttata HOM05D002027 ORTHO05D007928 3.3e-14 82.8 196 32.1
Hund25572 Selenicereus undatus HOM05D002027 ORTHO05D007928 3.3e-14 82.8 214 32.7
Lj7A214T27 Lonicera japonica HOM05D002027 ORTHO05D007928 5.7e-14 82.0 214 30.8
GSVIVG01035482001 Vitis vinifera HOM05D002027 ORTHO05D007928 5.7e-14 82.0 202 33.2
MELO3C016918.2 Cucumis melo HOM05D002027 ORTHO05D007928 9.6e-14 81.3 195 33.8
CsaV3_4G036100 Cucumis sativus L. HOM05D002027 ORTHO05D007928 3.7e-13 79.3 194 32.5
PGSC0003DMG400024394 Solanum tuberosum HOM05D002027 ORTHO05D007928 4.8e-13 79.0 210 31.0
Lj7A212G30 Lonicera japonica HOM05D002027 ORTHO05D007928 6.2e-13 78.6 212 30.7
MD08G1072900 Malus domestica HOM05D002027 ORTHO05D007928 6.2e-13 78.6 160 35.0
TAR624G0349 Trochodendron aralioides HOM05D000120 ORTHO05D007928 1.1e-12 77.8 141 34.0
Gohir.A07G019100 Gossypium hirsutum HOM05D002027 ORTHO05D007928 1.4e-12 77.4 210 34.8
CAN.G56.2 Capsicum annuum HOM05D002027 ORTHO05D007928 1.8e-12 77.0 209 29.7
Cc08_g01050 Coffea canephora HOM05D002027 ORTHO05D007928 1.8e-12 77.0 195 32.3
Sed0020055 Sechium edule HOM05D002027 ORTHO05D007928 3.1e-12 76.3 198 33.3
Aqoxy7G01035 Aquilegia oxysepala HOM05D002027 ORTHO05D007928 1.5e-11 73.9 210 29.0
Nn8g38643 Nelumbo nucifera HOM05D002027 ORTHO05D007928 2.0e-11 73.6 215 28.8
Peaxi162Scf00486g00315 Petunia axillaris HOM05D002027 ORTHO05D007928 2.6e-11 73.2 203 31.0
COL.COLO4_21153 Corchorus olitorius HOM05D002027 ORTHO05D007928 4.5e-11 72.4 126 34.1
Gorai.001G019600 Gossypium raimondii HOM05D002027 ORTHO05D007928 4.5e-11 72.4 180 35.0
Nitab4.5_0001576g0010 Nicotiana tabacum HOM05D002027 ORTHO05D007928 4.5e-11 72.4 200 31.5
Oeu022307.1 Olea europaea HOM05D002027 ORTHO05D007928 5.8e-11 72.0 170 35.3
Nn6g35623 Nelumbo nucifera HOM05D002027 ORTHO05D007928 7.6e-11 71.6 215 29.8
Sopen08g016820 Solanum pennellii HOM05D002027 ORTHO05D007928 7.6e-11 71.6 210 30.5
SGA_v2.0_scaffold20G09151 Striga asiatica HOM05D002027 ORTHO05D007928 1.0e-10 71.2 165 33.3
THA.LOC104803709 Tarenaya hassleriana HOM05D002027 ORTHO05D007928 1.0e-10 71.2 205 29.3
Nitab4.5_0006220g0040 Nicotiana tabacum HOM05D002027 ORTHO05D007928 1.3e-10 70.9 203 30.0
Solyc08g061480.3 Solanum lycopersicum HOM05D002027 ORTHO05D007928 2.9e-10 69.7 211 29.4
Duzib150G1126 Durio zibethinus HOM05D002027 ORTHO05D007928 7.1e-09 65.1 133 38.3
SalBow4G1403 Salvia bowleyana HOM05D002027 ORTHO05D007928 1.6e-08 63.9 175 31.4
TAR383G0615 Trochodendron aralioides HOM05D002027 ORTHO05D007928 1.6e-08 63.9 65 44.6
PSO724G0582 Papaver somniferum HOM05D002027 ORTHO05D007928 7.9e-08 61.6 162 27.8
PGR004G1932 Punica granatum HOM05D002027 ORTHO05D007928 1.0e-07 61.2 197 27.4
ATR0598G318 Amborella trichopoda HOM05D002027 ORTHO05D007928 3.9e-07 59.3 145 32.4
EL10Ac2g02409 Beta vulgaris HOM05D002027 ORTHO05D007928 1.1e-06 57.8 159 28.3
Gohir.D07G018900 Gossypium hirsutum HOM05D002027 ORTHO05D007928 7.4e-06 55.1 118 32.2


User provided reference genes

Program Settings