Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22948 Trifolium pratense HOM05D009148 ORTHO05D011895 5.0e-75 284.3 135 100.0
TPR.G20434 Trifolium pratense HOM05D009148 ORTHO05D011895 3.3e-42 175.3 107 74.8
Psat5g102600 Pisum sativum HOM05D009148 ORTHO05D011895 3.4e-31 138.7 136 57.4
Psat5g102520 Pisum sativum HOM05D009148 ORTHO05D011895 5.8e-31 137.9 133 57.1
Medtr3g083080 Medicago truncatula HOM05D009148 ORTHO05D011895 7.6e-31 137.5 135 55.6
Medtr3g083030 Medicago truncatula HOM05D009148 ORTHO05D011895 1.6e-28 129.8 137 52.6
Medtr3g083050 Medicago truncatula HOM05D009148 ORTHO05D011895 1.6e-28 129.8 137 52.6
Psat5g102480 Pisum sativum HOM05D009148 ORTHO05D011895 1.1e-26 123.6 133 51.1
TPR.G22949 Trifolium pratense HOM05D009148 ORTHO05D011895 3.1e-24 115.5 134 47.0
Ca_16363_v3 Cicer arietinum L. HOM05D009148 ORTHO05D011895 4.5e-23 111.7 140 45.0
Ca_16354_v3 Cicer arietinum L. HOM05D009148 ORTHO05D011895 2.1e-17 92.8 116 46.6
TPR.G30998 Trifolium pratense HOM05D009148 ORTHO05D011895 2.4e-16 89.4 134 41.8
Ca_16373_v3 Cicer arietinum L. HOM05D009148 ORTHO05D011895 3.1e-16 89.0 115 44.3
Ca_16374_v3 Cicer arietinum L. HOM05D009148 ORTHO05D011895 5.3e-16 88.2 115 44.3
Ca_16375_v3 Cicer arietinum L. HOM05D009148 ORTHO05D011895 5.3e-16 88.2 114 45.6
Medtr3g083100 Medicago truncatula HOM05D009148 ORTHO05D011895 1.2e-15 87.0 124 44.4
TPR.G10989 Trifolium pratense HOM05D009148 ORTHO05D011895 7.6e-15 84.3 112 43.8
Medtr3g083150 Medicago truncatula HOM05D009148 ORTHO05D011895 8.4e-14 80.9 136 38.2
Medtr3g082340 Medicago truncatula HOM05D009148 ORTHO05D011895 4.2e-13 78.6 118 39.0
Medtr3g082420 Medicago truncatula HOM05D009148 ORTHO05D011895 4.2e-13 78.6 118 39.0
Psat5g101360 Pisum sativum HOM05D009148 ORTHO05D011895 1.6e-09 66.6 65 47.7
Medtr4g055800 Medicago truncatula HOM05D009148 ORTHO05D263161 1.8e-08 63.2 99 39.4
CAN.G128.119 Capsicum annuum HOM05D001907 ORTHO05D015557 6.9e-08 61.2 107 36.4
CAN.G128.124 Capsicum annuum HOM05D001907 ORTHO05D015557 6.9e-08 61.2 107 36.4
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.0e-08 60.8 108 34.3
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-07 60.5 108 34.3
CAN.G128.123 Capsicum annuum HOM05D001907 ORTHO05D015557 1.5e-07 60.1 107 36.4
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-07 59.7 108 32.4
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-07 59.7 108 34.3
CAN.G3720.1 Capsicum annuum HOM05D010354 ORTHO05D015557 2.0e-07 59.7 107 36.4
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 2.6e-07 59.3 144 31.9
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 3.4e-07 58.9 120 33.3
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 1.0e-06 57.4 111 36.0
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-06 56.6 114 36.0
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.8e-06 55.5 93 36.6
VMungo0647G2419 Vigna mungo HOM05D000519 ORTHO05D001210 3.8e-06 55.5 100 31.0
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 4.9e-06 55.1 114 35.1
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 4.9e-06 55.1 94 38.3
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 4.9e-06 55.1 94 38.3
Medtr3g086030 Medicago truncatula HOM05D009148 ORTHO05D011895 8.4e-06 54.3 54 53.7
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 8.4e-06 54.3 111 36.0


User provided reference genes

Program Settings