Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22932 Trifolium pratense HOM05D004543 ORTHO05D037602 2.9e-42 174.9 93 100.0
TPR.G18590 Trifolium pratense HOM05D001327 ORTHO05D002270 6.6e-34 147.1 93 86.0
Ca_00911_v3 Cicer arietinum L. HOM05D004543 ORTHO05D006042 8.9e-31 136.7 92 80.4
Lj4g0012876 Lotus japonicus HOM05D004543 ORTHO05D006042 1.9e-28 129.0 92 76.1
Glyma.05G047300 Glycine max HOM05D004543 ORTHO05D006042 3.2e-28 128.3 92 75.0
Glyma.17G129100 Glycine max HOM05D004543 ORTHO05D006042 1.6e-27 125.9 92 73.9
Phvul.003G210200 Phaseolus vulgaris HOM05D004543 ORTHO05D006042 1.6e-27 125.9 92 73.9
Lalb_Chr07g0183361 Lupinus albus HOM05D004543 ORTHO05D006042 3.5e-27 124.8 92 70.7
VMungo1215G3183 Vigna mungo HOM05D004543 ORTHO05D006042 1.3e-26 122.9 92 72.8
arahy.Tifrunner.gnm1.ann1.9QW7J0 Arachis hypogaea HOM05D004543 ORTHO05D006042 6.6e-26 120.6 95 71.6
arahy.Tifrunner.gnm1.ann1.28ZGNX Arachis hypogaea HOM05D004543 ORTHO05D006042 8.6e-26 120.2 95 71.6
Medtr4g103610 Medicago truncatula HOM05D004543 ORTHO05D006042 3.3e-25 118.2 92 71.7
TWI23G0493 Tripterygium wilfordii HOM05D004543 ORTHO05D006042 6.8e-23 110.5 92 63.0
RcHm_v2.0_Chr7g0190411 Rosa chinensis HOM05D004543 ORTHO05D006042 8.9e-23 110.2 92 63.0
Haze_07231 Corylus avellana HOM05D004543 ORTHO05D006042 1.2e-22 109.8 91 64.8
Thecc.06G039500 Theobroma cacao HOM05D004543 ORTHO05D006042 1.5e-22 109.4 93 62.4
Cfa018837 Carpinus fangiana HOM05D004543 ORTHO05D006042 2.0e-22 109.0 91 63.7
COL.COLO4_26675 Corchorus olitorius HOM05D004543 ORTHO05D006042 3.4e-22 108.2 93 63.4
Duzib138G1537 Durio zibethinus HOM05D004543 ORTHO05D006042 4.4e-22 107.8 93 60.2
THA.LOC104811593 Tarenaya hassleriana HOM05D004543 ORTHO05D006042 4.4e-22 107.8 92 60.9
CiPaw.11G008900 Carya illinoinensis HOM05D004543 ORTHO05D006042 5.8e-22 107.5 91 64.8
Gohir.A11G168800 Gossypium hirsutum HOM05D004543 ORTHO05D006042 5.8e-22 107.5 93 60.2
Gohir.D11G175000 Gossypium hirsutum HOM05D004543 ORTHO05D006042 9.9e-22 106.7 93 60.2
Gorai.007G187600 Gossypium raimondii HOM05D004543 ORTHO05D006042 9.9e-22 106.7 93 60.2
QL10p004063 Quercus lobata HOM05D004543 ORTHO05D006042 9.9e-22 106.7 91 63.7
PGR083G0162 Punica granatum HOM05D004543 ORTHO05D006042 1.3e-21 106.3 93 60.2
Sed0026192 Sechium edule HOM05D004543 ORTHO05D006042 1.3e-21 106.3 93 60.2
Sc04g0000730 Simmondsia chinensis HOM05D004543 ORTHO05D006042 1.3e-21 106.3 92 64.1
vmacro19212 Vaccinium macrocarpon HOM05D004543 ORTHO05D006042 2.2e-21 105.5 93 61.3
Lj9C477T19 Lonicera japonica HOM05D004543 ORTHO05D006042 3.7e-21 104.8 95 61.1
Cpa.g.sc13.138 Carica papaya HOM05D004543 ORTHO05D006042 4.9e-21 104.4 92 60.9
Ciclev10018979m.g Citrus clementina HOM05D004543 ORTHO05D006042 4.9e-21 104.4 93 60.2
CSS0037462 Camellia sinensis var. sinensis HOM05D004543 ORTHO05D006042 6.4e-21 104.0 92 60.9
Rhsim08G0188800 Rhododendron simsii HOM05D004543 ORTHO05D006042 6.4e-21 104.0 93 60.2
Eucgr.B00121 Eucalyptus grandis HOM05D004543 ORTHO05D006042 1.4e-20 102.8 93 58.1
Nn3g16500 Nelumbo nucifera HOM05D004543 ORTHO05D006042 1.4e-20 102.8 93 58.1
MD14G1158600 Malus domestica HOM05D004543 ORTHO05D006042 1.9e-20 102.4 92 58.7
Sed0023388 Sechium edule HOM05D004543 ORTHO05D006042 1.9e-20 102.4 91 58.2
Actinidia25587 Actinidia chinensis HOM05D004543 ORTHO05D006042 3.2e-20 101.7 92 59.8
SGA_v2.0_scaffold161G37784 Striga asiatica HOM05D004543 ORTHO05D006042 3.2e-20 101.7 92 58.7
Actinidia15838 Actinidia chinensis HOM05D004543 ORTHO05D006042 4.1e-20 101.3 92 58.7
CANSAT80G2145 Cannabis sativa HOM05D004543 ORTHO05D006042 4.1e-20 101.3 92 60.9
Dinv04875 Davidia involucrata HOM05D004543 ORTHO05D006042 4.1e-20 101.3 92 59.8
Hma1.2p1_0140F.1_g063450 Hydrangea macrophylla HOM05D004543 ORTHO05D006042 4.1e-20 101.3 92 58.7
ClCG11G005570 Citrullus lanatus HOM05D004543 ORTHO05D006042 5.4e-20 100.9 91 58.2
Manes.06G118300 Manihot esculenta HOM05D004543 ORTHO05D006042 5.4e-20 100.9 92 58.7
AL7G28340 Arabidopsis lyrata HOM05D004543 ORTHO05D006042 9.2e-20 100.1 92 57.6
Hund02429 Selenicereus undatus HOM05D004543 ORTHO05D006042 9.2e-20 100.1 92 59.8
CARHR232260 Cardamine hirsuta HOM05D004543 ORTHO05D006042 1.6e-19 99.4 92 56.5
CsaV3_6G002430 Cucumis sativus L. HOM05D004543 ORTHO05D006042 2.1e-19 99.0 91 57.1
Carub.0007s1621 Capsella rubella HOM05D004543 ORTHO05D006042 2.7e-19 98.6 92 56.5
MELO3C025044.2 Cucumis melo HOM05D004543 ORTHO05D006042 3.5e-19 98.2 91 57.1
Oeu056011.1 Olea europaea HOM05D004543 ORTHO05D006042 3.5e-19 98.2 92 56.5
Aa31LG7G11000 Aethionema arabicum HOM05D004543 ORTHO05D006042 4.6e-19 97.8 93 57.0
FvH4_5g08050 Fragaria vesca HOM05D004543 ORTHO05D006042 4.6e-19 97.8 92 59.8
FAN13G0766 Fragaria x ananassa HOM05D004543 ORTHO05D006042 4.6e-19 97.8 92 59.8
GSVIVG01008523001 Vitis vinifera HOM05D004543 ORTHO05D006042 6.0e-19 97.4 92 58.7
AT4G24840 Arabidopsis thaliana HOM05D004543 ORTHO05D006042 7.8e-19 97.1 92 55.4
FAN04G2916 Fragaria x ananassa HOM05D004543 ORTHO05D006042 7.8e-19 97.1 92 59.8
FAN08G2446 Fragaria x ananassa HOM05D004543 ORTHO05D006042 7.8e-19 97.1 92 59.8
MD06G1143400 Malus domestica HOM05D004543 ORTHO05D006042 7.8e-19 97.1 92 56.5
Prupe.5G152600 Prunus persica HOM05D004543 ORTHO05D006042 7.8e-19 97.1 92 54.3
unitig_8.g3033 Utricularia gibba HOM05D004543 ORTHO05D006042 1.0e-18 96.7 92 57.6
BcaC06g32853 Brassica carinata HOM05D004543 ORTHO05D006042 1.7e-18 95.9 92 54.3
A03p55600 Brassica napus HOM05D004543 ORTHO05D006042 1.7e-18 95.9 92 54.3
C07p53840 Brassica napus HOM05D004543 ORTHO05D006042 1.7e-18 95.9 92 54.3
BolC7t45874H Brassica oleracea HOM05D004543 ORTHO05D006042 1.7e-18 95.9 92 54.3
BraA03t14627Z Brassica rapa HOM05D004543 ORTHO05D006042 1.7e-18 95.9 92 54.3
Carub.0003s0428 Capsella rubella HOM05D004543 ORTHO05D006042 1.7e-18 95.9 92 55.4
Migut.I00508 Erythranthe guttata HOM05D004543 ORTHO05D006042 1.7e-18 95.9 92 57.6
Hma1.2p1_1271F.1_g271760 Hydrangea macrophylla HOM05D004543 ORTHO05D006042 2.3e-18 95.5 89 57.3
FAN18G3295 Fragaria x ananassa HOM05D004543 ORTHO05D006042 3.0e-18 95.1 92 58.7
CDE05G1945 Ceratophyllum demersum HOM05D004543 ORTHO05D006042 6.6e-18 94.0 92 57.6
Cc07_g18860 Coffea canephora HOM05D004543 ORTHO05D006042 6.6e-18 94.0 93 55.9
Aqoxy5G03415 Aquilegia oxysepala HOM05D004543 ORTHO05D006042 8.6e-18 93.6 92 52.2
Dinv11159 Davidia involucrata HOM05D004543 ORTHO05D006042 8.6e-18 93.6 92 55.4
Sopen08g002610 Solanum pennellii HOM05D004543 ORTHO05D006042 8.6e-18 93.6 92 54.3
Migut.I00509 Erythranthe guttata HOM05D004543 ORTHO05D006042 1.1e-17 93.2 92 55.4
Manes.14G052401 Manihot esculenta HOM05D004543 ORTHO05D006042 1.5e-17 92.8 92 53.3
Sp7g22830 Schrenkiella parvula HOM05D004543 ORTHO05D006042 1.5e-17 92.8 92 52.2
PSO063G5574 Papaver somniferum HOM05D004543 ORTHO05D006042 1.9e-17 92.4 92 52.2
Nitab4.5_0001187g0130 Nicotiana tabacum HOM05D004543 ORTHO05D006042 2.5e-17 92.0 92 55.4
PSO782G5417 Papaver somniferum HOM05D004543 ORTHO05D006042 3.3e-17 91.7 92 52.2
Peaxi162Scf00045g00192 Petunia axillaris HOM05D004543 ORTHO05D006042 4.3e-17 91.3 92 56.5
PGSC0003DMG400026304 Solanum tuberosum HOM05D004543 ORTHO05D006042 4.3e-17 91.3 92 54.3
vmacro20276 Vaccinium macrocarpon HOM05D004543 ORTHO05D037602 4.3e-17 91.3 87 58.6
ECA232G1394 Erigeron canadensis HOM05D004543 ORTHO05D006042 7.3e-17 90.5 92 52.2
Thhalv10024490m.g Eutrema salsugineum HOM05D004543 ORTHO05D006042 7.3e-17 90.5 92 51.1
ATR0561G088 Amborella trichopoda HOM05D004543 ORTHO05D006042 9.6e-17 90.1 92 54.3
AL3G15410 Arabidopsis lyrata HOM05D004543 ORTHO05D006042 9.6e-17 90.1 92 53.3
A01p16150 Brassica napus HOM05D004543 ORTHO05D006042 1.2e-16 89.7 92 51.1
C01p20140 Brassica napus HOM05D004543 ORTHO05D006042 1.2e-16 89.7 92 51.1
BolC1t01943H Brassica oleracea HOM05D004543 ORTHO05D006042 1.2e-16 89.7 92 51.1
BraA01t01551Z Brassica rapa HOM05D004543 ORTHO05D006042 1.2e-16 89.7 92 51.1
AUR62029871 Chenopodium quinoa HOM05D004543 ORTHO05D006042 1.6e-16 89.4 92 53.3
Nitab4.5_0002497g0060 Nicotiana tabacum HOM05D004543 ORTHO05D006042 1.6e-16 89.4 92 53.3
SHI28598 Sapria himalayana HOM05D004543 ORTHO05D006042 2.8e-16 88.6 93 49.5
Atru.chr9.1076 Acer truncatum HOM05D004543 ORTHO05D006042 3.6e-16 88.2 93 48.4
EL10As4g23416 Beta vulgaris HOM05D004543 ORTHO05D006042 3.6e-16 88.2 92 56.5
AUR62025843 Chenopodium quinoa HOM05D004543 ORTHO05D006042 3.6e-16 88.2 93 50.5
CAN.G906.5 Capsicum annuum HOM05D004543 ORTHO05D006042 4.7e-16 87.8 92 52.2
HPP92_007000 Vanilla planifolia HOM05D004543 ORTHO05D006042 8.1e-16 87.0 93 52.7
Lsat_1_v5_gn_4_76761 Lactuca sativa HOM05D004543 ORTHO05D006042 1.1e-15 86.7 92 48.9
HanXRQChr09g0273071 Helianthus annuus HOM05D004543 ORTHO05D006042 1.4e-15 86.3 95 50.5
Potri.012G096100 Populus trichocarpa HOM05D004543 ORTHO05D006042 3.1e-15 85.1 92 50.0
BcaNung04937 Brassica carinata HOM05D004543 ORTHO05D006042 5.2e-15 84.3 95 48.4
Potri.015G094000 Populus trichocarpa HOM05D004543 ORTHO05D006042 2.0e-14 82.4 92 47.8
SEGI_01008 Sequoiadendron giganteum HOM05D004543 ORTHO05D037602 2.0e-14 82.4 93 51.6
SEGI_19802 Sequoiadendron giganteum HOM05D004543 ORTHO05D006042 2.0e-14 82.4 93 51.6
A03p08790 Brassica napus HOM05D004543 ORTHO05D006042 4.4e-14 81.3 96 51.0
C03p10280 Brassica napus HOM05D004543 ORTHO05D006042 2.2e-13 79.0 96 50.0
BraA03t10204Z Brassica rapa HOM05D004543 ORTHO05D006042 2.2e-13 79.0 96 50.0
Sabra15G0115500 Salix brachista HOM05D004543 ORTHO05D006042 2.2e-13 79.0 92 45.7
Sp6g25960 Schrenkiella parvula HOM05D004543 ORTHO05D006042 3.8e-13 78.2 96 49.0
BcaB01g05188 Brassica carinata HOM05D004543 ORTHO05D006042 1.1e-12 76.6 96 49.0
BolC3t13508H Brassica oleracea HOM05D004543 ORTHO05D006042 1.4e-12 76.3 93 47.3
Zm00001eb210790 Zea mays HOM05D004543 ORTHO05D006042 1.4e-12 76.3 92 45.7
Os03g0849600 Oryza sativa ssp. japonica HOM05D004543 ORTHO05D006042 1.6e-11 72.8 92 42.4
BcaNung06004 Brassica carinata HOM05D004543 ORTHO05D006042 3.9e-10 68.2 76 47.4
Mapoly0003s0046 Marchantia polymorpha HOM05D004543 ORTHO05D006042 1.5e-09 66.2 92 39.1
Medtr3g105000 Medicago truncatula HOM05D004543 ORTHO05D006042 3.3e-09 65.1 67 62.7
DCAR_026221 Daucus carota HOM05D004543 ORTHO05D006042 1.1e-07 60.1 83 43.4
TAR622G0482 Trochodendron aralioides HOM05D004543 ORTHO05D006042 3.1e-07 58.5 49 59.2
AagrBONN_evm.TU.Sc2ySwM_344.2190 Anthoceros agrestis HOM05D004543 ORTHO05D006042 6.9e-07 57.4 97 34.0


User provided reference genes

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