Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22869 Trifolium pratense HOM05D056069 ORTHO05D010768 0.0e+00 1271.5 628 100.0
TPR.G35324 Trifolium pratense HOM05D000047 ORTHO05D000589 2.8e-43 181.0 592 29.9
TPR.G10353 Trifolium pratense HOM05D000014 ORTHO05D000589 3.4e-41 174.1 420 34.0
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 2.9e-40 171.0 484 30.0
TPR.G22150 Trifolium pratense HOM05D000047 ORTHO05D000589 7.8e-38 162.9 117 71.8
TPR.G10789 Trifolium pratense HOM05D000047 ORTHO05D000589 1.2e-30 139.0 120 53.3
TPR.G36848 Trifolium pratense HOM05D000047 ORTHO05D000589 1.2e-30 139.0 463 28.9
TPR.G33037 Trifolium pratense HOM05D000047 ORTHO05D000589 4.6e-30 137.1 120 53.3
TPR.G31393 Trifolium pratense HOM05D000047 ORTHO05D000589 2.5e-28 131.3 80 81.2
TPR.G11466 Trifolium pratense HOM05D056069 ORTHO05D411079 2.1e-27 128.3 80 83.8
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 4.5e-25 120.6 235 32.3
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 4.5e-25 120.6 235 32.3
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 7.6e-25 119.8 254 29.1
Duzib084G1197 Durio zibethinus HOM05D000047 ORTHO05D000044 3.8e-24 117.5 224 33.5
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 7.1e-23 113.2 113 43.4
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 2.1e-22 111.7 81 55.6
TWI81G0102 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.1e-22 111.7 198 33.8
TPR.G35080 Trifolium pratense HOM05D000047 ORTHO05D000589 2.7e-22 111.3 92 48.9
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.5e-22 110.9 251 31.1
TWI15G0372 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 7.9e-22 109.8 200 34.5
Duzib268G0258 Durio zibethinus HOM05D000047 ORTHO05D000589 3.0e-21 107.8 237 29.1
TPR.G4327 Trifolium pratense HOM05D000047 ORTHO05D000589 3.9e-21 107.5 88 52.3
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 8.7e-21 106.3 504 24.6
TPR.G17648 Trifolium pratense HOM05D000047 ORTHO05D000589 1.1e-20 105.9 76 55.3
TPR.G36275 Trifolium pratense HOM05D000047 ORTHO05D010768 4.3e-20 104.0 77 54.5
Ca_01749_v3 Cicer arietinum L. HOM05D011496 ORTHO05D010768 7.4e-20 103.2 96 51.0
Medtr8g095235 Medicago truncatula HOM05D009185 ORTHO05D010768 1.6e-19 102.1 238 29.8
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.8e-19 101.3 138 40.6
TPR.G16375 Trifolium pratense HOM05D009185 ORTHO05D010768 4.8e-19 100.5 77 54.5
TPR.G13572 Trifolium pratense HOM05D000047 ORTHO05D000589 6.2e-19 100.1 77 54.5
Duzib114G0732 Durio zibethinus HOM05D000047 ORTHO05D000589 8.1e-19 99.8 236 30.1
TPR.G20886 Trifolium pratense HOM05D009185 ORTHO05D010768 1.4e-18 99.0 122 42.6
Ca_02960_v3 Cicer arietinum L. HOM05D010731 ORTHO05D000589 1.8e-18 98.6 175 33.1
Duzib268G1526 Durio zibethinus HOM05D000047 ORTHO05D000589 6.9e-18 96.7 195 29.7
TPR.G18503 Trifolium pratense HOM05D009185 ORTHO05D010768 9.0e-18 96.3 76 52.6
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.6e-17 94.7 119 43.7
Sed0016672 Sechium edule HOM05D000047 ORTHO05D000589 1.3e-16 92.4 183 29.5
Ca_13231_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 4.9e-16 90.5 287 27.9
VMungo0720G0831 Vigna mungo HOM05D000015 ORTHO05D048578 1.1e-15 89.4 150 36.7
Medtr5g057715 Medicago truncatula HOM05D009185 ORTHO05D010768 4.2e-15 87.4 282 24.8
Ca_07062_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 4.6e-14 84.0 70 50.0
Ca_22936_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 6.0e-14 83.6 76 46.1
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 6.0e-14 83.6 121 38.8
Duzib160G0848 Durio zibethinus HOM05D000047 ORTHO05D000589 7.9e-14 83.2 79 43.0
Ca_02998_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.0e-13 82.8 69 49.3
Medtr1g050415 Medicago truncatula HOM05D009185 ORTHO05D010768 1.8e-13 82.0 89 41.6
TPR.G18586 Trifolium pratense HOM05D002881 ORTHO05D000589 2.3e-13 81.6 175 33.1
Thecc.10G123500 Theobroma cacao HOM05D000047 ORTHO05D000589 5.1e-13 80.5 173 30.1
Duzib106G2061 Durio zibethinus HOM05D000047 ORTHO05D000044 6.7e-13 80.1 222 27.9
Medtr5g057040 Medicago truncatula HOM05D011496 ORTHO05D000589 1.1e-12 79.3 158 34.2
Thecc.02G289400 Theobroma cacao HOM05D000414 ORTHO05D000276 1.1e-12 79.3 131 33.6
TPR.G14983 Trifolium pratense HOM05D011496 ORTHO05D000589 1.1e-12 79.3 63 52.4
Ca_27971_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.5e-12 79.0 72 47.2
TPR.G5842 Trifolium pratense HOM05D000047 ORTHO05D000589 1.5e-12 79.0 477 25.4
Medtr3g463110 Medicago truncatula HOM05D009185 ORTHO05D010768 3.3e-12 77.8 215 25.1
Medtr8g059190 Medicago truncatula HOM05D009185 ORTHO05D010768 4.3e-12 77.4 87 40.2
Ca_23456_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 7.4e-12 76.6 154 29.2
Actinidia34913 Actinidia chinensis HOM05D000047 ORTHO05D000589 1.3e-11 75.9 144 31.9
Medtr2g076103 Medicago truncatula HOM05D011496 ORTHO05D010768 2.1e-11 75.1 94 37.2
Medtr3g020105 Medicago truncatula HOM05D011496 ORTHO05D010768 2.1e-11 75.1 163 33.1
Duzib168G2089 Durio zibethinus HOM05D000047 ORTHO05D000589 2.8e-11 74.7 229 26.6
Medtr0159s0060 Medicago truncatula HOM05D011496 ORTHO05D010768 3.7e-11 74.3 147 33.3
Medtr2g064025 Medicago truncatula HOM05D011496 ORTHO05D010768 6.2e-11 73.6 144 34.7
Medtr0001s0260 Medicago truncatula HOM05D009185 ORTHO05D010768 8.2e-11 73.2 98 35.7
Medtr3g048545 Medicago truncatula HOM05D011496 ORTHO05D010768 8.2e-11 73.2 94 36.2
Medtr7g081462 Medicago truncatula HOM05D011496 ORTHO05D010768 8.2e-11 73.2 94 36.2
Ca_04841_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.4e-10 72.4 146 28.8
Medtr0014s0410 Medicago truncatula HOM05D009185 ORTHO05D010768 2.4e-10 71.6 132 32.6
MBI05_g05358_MAGBIO Magnolia biondii HOM05D057483 ORTHO05D023234 3.1e-10 71.2 82 41.5
TWI18G1396 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 4.1e-10 70.9 89 36.0
Medtr2g037220 Medicago truncatula HOM05D011496 ORTHO05D010768 5.3e-10 70.5 94 36.2
Thecc.02G169500 Theobroma cacao HOM05D000047 ORTHO05D000589 5.3e-10 70.5 151 31.1
Medtr0155s0050 Medicago truncatula HOM05D009185 ORTHO05D010768 6.9e-10 70.1 103 35.0
PGSC0003DMG400038435 Solanum tuberosum HOM05D000047 ORTHO05D000589 9.0e-10 69.7 225 24.4
Medtr0260s0010 Medicago truncatula HOM05D011496 ORTHO05D000301 1.5e-09 68.9 176 30.7
Actinidia34833 Actinidia chinensis HOM05D064681 ORTHO05D023234 5.8e-09 67.0 82 39.0
PGR051G0001 Punica granatum HOM05D000047 ORTHO05D000589 5.8e-09 67.0 123 36.6
PGR031G3326 Punica granatum HOM05D000047 ORTHO05D000589 7.6e-09 66.6 116 36.2
Duzib264G0666 Durio zibethinus HOM05D000047 ORTHO05D000589 1.0e-08 66.2 75 40.0
Medtr6g464470 Medicago truncatula HOM05D002881 ORTHO05D002983 1.0e-08 66.2 69 43.5
PGR031G2581 Punica granatum HOM05D000047 ORTHO05D000589 1.7e-08 65.5 117 35.0
PGSC0003DMG400042281 Solanum tuberosum HOM05D000047 ORTHO05D000589 1.7e-08 65.5 233 23.2
Medtr0389s0020 Medicago truncatula HOM05D009185 ORTHO05D010768 2.9e-08 64.7 77 37.7
Medtr4g045943 Medicago truncatula HOM05D009185 ORTHO05D010768 2.9e-08 64.7 91 38.5
PGR031G0584 Punica granatum HOM05D000047 ORTHO05D007790 2.9e-08 64.7 124 36.3
Duzib248G0250 Durio zibethinus HOM05D000061 ORTHO05D000050 5.0e-08 63.9 76 36.8
Sopen10g014590 Solanum pennellii HOM05D000047 ORTHO05D000589 5.0e-08 63.9 118 31.4
VMungo0331G0129 Vigna mungo HOM05D000047 ORTHO05D000589 8.4e-08 63.2 72 37.5
AUR62036961 Chenopodium quinoa HOM05D009273 ORTHO05D000589 1.1e-07 62.8 116 36.2
Medtr6g471190 Medicago truncatula HOM05D009185 ORTHO05D010768 1.1e-07 62.8 77 39.0
Medtr7g034030 Medicago truncatula HOM05D009185 ORTHO05D010768 1.1e-07 62.8 132 31.1
Lalb_Chr03g0038251 Lupinus albus HOM05D000047 ORTHO05D000589 1.4e-07 62.4 81 33.3
PGR083G0665 Punica granatum HOM05D000047 ORTHO05D000589 1.4e-07 62.4 145 32.4
Medtr0002s0070 Medicago truncatula HOM05D009185 ORTHO05D010768 1.9e-07 62.0 75 44.0
Sopen08g008700 Solanum pennellii HOM05D000047 ORTHO05D000044 1.9e-07 62.0 108 32.4
AUR62042972 Chenopodium quinoa HOM05D009273 ORTHO05D011122 2.5e-07 61.6 116 36.2
PGSC0003DMG400033678 Solanum tuberosum HOM05D000047 ORTHO05D000589 2.5e-07 61.6 118 30.5
Sopen00g013170 Solanum pennellii HOM05D000047 ORTHO05D000589 3.2e-07 61.2 119 31.9
TPR.G35809 Trifolium pratense HOM05D000047 ORTHO05D000589 3.2e-07 61.2 135 34.1
AUR62037095 Chenopodium quinoa HOM05D009273 ORTHO05D011122 4.2e-07 60.8 91 35.2
Duzib213G0125 Durio zibethinus HOM05D000047 ORTHO05D000044 4.2e-07 60.8 79 38.0
Sopen12g018030 Solanum pennellii HOM05D000047 ORTHO05D000589 4.2e-07 60.8 108 31.5
AUR62026412 Chenopodium quinoa HOM05D009273 ORTHO05D011122 7.2e-07 60.1 113 32.7
AUR62042427 Chenopodium quinoa HOM05D009273 ORTHO05D011122 9.3e-07 59.7 116 35.3
PGR031G1099 Punica granatum HOM05D000047 ORTHO05D000589 9.3e-07 59.7 130 33.1
Sopen11g020130 Solanum pennellii HOM05D000047 ORTHO05D000044 9.3e-07 59.7 103 32.0
Sopen12g021880 Solanum pennellii HOM05D000047 ORTHO05D000044 9.3e-07 59.7 116 29.3
Medtr7g010878 Medicago truncatula HOM05D011496 ORTHO05D010768 1.2e-06 59.3 83 33.7
Sopen03g019340 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-06 59.3 103 32.0
Sopen10g015870 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-06 59.3 103 32.0
PGSC0003DMG400040372 Solanum tuberosum HOM05D000047 ORTHO05D014688 1.2e-06 59.3 224 23.2
TWI34G1550 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 1.2e-06 59.3 98 32.7
Medtr4g045717 Medicago truncatula HOM05D009185 ORTHO05D010768 1.6e-06 58.9 107 34.6
PGR042G3501 Punica granatum HOM05D000047 ORTHO05D007790 2.1e-06 58.5 146 29.5
Sopen06g006470 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-06 58.5 88 34.1
Sopen12g009930 Solanum pennellii HOM05D000047 ORTHO05D000589 2.1e-06 58.5 109 29.4
AUR62038327 Chenopodium quinoa HOM05D009273 ORTHO05D011122 2.7e-06 58.2 115 33.9
Dinv10876 Davidia involucrata HOM05D000047 ORTHO05D008628 2.7e-06 58.2 97 32.0
Sopen11g009430 Solanum pennellii HOM05D000047 ORTHO05D000589 2.7e-06 58.2 136 28.7
Sopen12g010430 Solanum pennellii HOM05D000047 ORTHO05D000589 2.7e-06 58.2 84 36.9
TWI15G0628 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.7e-06 58.2 199 25.6
MBI13_g19838_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 3.5e-06 57.8 123 28.5
Medtr3g090210 Medicago truncatula HOM05D009185 ORTHO05D010768 3.5e-06 57.8 78 41.0
Nn3g20114 Nelumbo nucifera HOM05D057888 ORTHO05D008628 3.5e-06 57.8 69 36.2
Sopen00g007930 Solanum pennellii HOM05D000047 ORTHO05D000044 3.5e-06 57.8 88 34.1
Sopen01g012890 Solanum pennellii HOM05D000047 ORTHO05D000044 3.5e-06 57.8 66 37.9
Sopen06g013310 Solanum pennellii HOM05D000047 ORTHO05D000589 3.5e-06 57.8 87 34.5
AUR62036760 Chenopodium quinoa HOM05D000030 ORTHO05D011122 4.6e-06 57.4 111 36.0
Medtr3g040760 Medicago truncatula HOM05D009185 ORTHO05D010768 6.1e-06 57.0 79 31.6
AUR62025784 Chenopodium quinoa HOM05D010410 ORTHO05D011122 7.9e-06 56.6 96 32.3
Sopen01g009320 Solanum pennellii HOM05D000047 ORTHO05D000589 7.9e-06 56.6 118 29.7
Sopen04g020160 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-06 56.6 66 37.9


User provided reference genes

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