Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22797 Trifolium pratense HOM05D000208 ORTHO05D411605 1.1e-30 136.3 86 100.0
Ca_23347_v3 Cicer arietinum L. HOM05D000208 ORTHO05D000130 1.0e-25 119.8 86 84.9
Medtr8g018690 Medicago truncatula HOM05D000208 ORTHO05D000130 4.4e-24 114.4 87 78.2
Medtr8g018550 Medicago truncatula HOM05D000208 ORTHO05D000130 7.0e-22 107.1 86 67.4
arahy.Tifrunner.gnm1.ann1.NDAY03 Arachis hypogaea HOM05D000208 ORTHO05D000130 9.1e-22 106.7 86 77.9
Medtr8g020990 Medicago truncatula HOM05D000208 ORTHO05D000130 9.1e-22 106.7 86 67.4
arahy.Tifrunner.gnm1.ann1.V9UCIZ Arachis hypogaea HOM05D000208 ORTHO05D000130 1.6e-21 105.9 86 77.9
Phvul.010G135900 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 2.0e-21 105.5 86 67.4
VMungo0331G1916 Vigna mungo HOM05D000208 ORTHO05D000130 2.2e-20 102.1 83 74.7
Glyma.08G189800 Glycine max HOM05D000208 ORTHO05D000130 2.9e-20 101.7 86 72.1
Ca_23344_v3 Cicer arietinum L. HOM05D000208 ORTHO05D000130 5.0e-20 100.9 86 66.3
Ca_23346_v3 Cicer arietinum L. HOM05D000208 ORTHO05D000130 5.0e-20 100.9 86 66.3
Glyma.08G189600 Glycine max HOM05D000208 ORTHO05D000130 5.5e-19 97.4 86 64.0
Lj3g0022873 Lotus japonicus HOM05D000208 ORTHO05D000130 2.1e-18 95.5 86 62.8
Psat0s1211g0080 Pisum sativum HOM05D000208 ORTHO05D000130 4.7e-18 94.4 79 67.1
Lalb_Chr25g0280951 Lupinus albus HOM05D000208 ORTHO05D000130 6.1e-18 94.0 95 55.8
TPR.G7891 Trifolium pratense HOM05D000208 ORTHO05D000130 8.0e-18 93.6 85 64.7
Lalb_Chr24g0396551 Lupinus albus HOM05D000208 ORTHO05D000130 1.4e-17 92.8 86 59.3
Medtr8g018520 Medicago truncatula HOM05D000208 ORTHO05D000130 5.2e-17 90.9 86 58.1
Psat0s4366g0040 Pisum sativum HOM05D000208 ORTHO05D000130 2.6e-16 88.6 86 58.1
Lj3g0023163 Lotus japonicus HOM05D000208 ORTHO05D000130 3.4e-16 88.2 86 57.0
Lj3g0000700 Lotus japonicus HOM05D000208 ORTHO05D000130 1.3e-15 86.3 86 54.7
Ca_01223_v3 Cicer arietinum L. HOM05D000208 ORTHO05D000130 1.7e-15 85.9 86 54.7
Phvul.005G157000 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 2.2e-15 85.5 86 54.7
Medtr2g099570 Medicago truncatula HOM05D000208 ORTHO05D000130 3.7e-15 84.7 86 54.7
VMungo0331G1661 Vigna mungo HOM05D000208 ORTHO05D000130 3.7e-15 84.7 86 54.7
Psat5g289880 Pisum sativum HOM05D000208 ORTHO05D000130 4.8e-15 84.3 86 54.7
Lalb_Chr04g0263291 Lupinus albus HOM05D000208 ORTHO05D000130 6.3e-15 84.0 77 59.7
Medtr8g018510 Medicago truncatula HOM05D000208 ORTHO05D000130 1.1e-14 83.2 86 50.0
arahy.Tifrunner.gnm1.ann1.0B3TGP Arachis hypogaea HOM05D000208 ORTHO05D000130 1.4e-14 82.8 86 54.7
Lalb_Chr22g0351931 Lupinus albus HOM05D000208 ORTHO05D000130 1.4e-14 82.8 85 54.1
TPR.G7902 Trifolium pratense HOM05D000208 ORTHO05D000130 2.4e-14 82.0 86 55.8
Glyma.08G189200 Glycine max HOM05D000208 ORTHO05D000130 3.1e-14 81.6 85 55.3
Psat0s978g0080 Pisum sativum HOM05D000208 ORTHO05D000130 4.1e-14 81.3 86 54.7
VMungo1080G1666 Vigna mungo HOM05D000208 ORTHO05D000130 5.4e-14 80.9 86 50.0
arahy.Tifrunner.gnm1.ann1.9LG0C7 Arachis hypogaea HOM05D000208 ORTHO05D000130 7.0e-14 80.5 86 51.2
arahy.Tifrunner.gnm1.ann1.RA2WWK Arachis hypogaea HOM05D000208 ORTHO05D000130 9.1e-14 80.1 86 51.2
Phvul.010G135800 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 1.2e-13 79.7 83 53.0
Lalb_Chr24g0396561 Lupinus albus HOM05D000208 ORTHO05D000130 2.7e-13 78.6 86 50.0
Medtr8g018570 Medicago truncatula HOM05D000208 ORTHO05D000130 3.5e-13 78.2 87 56.3
TPR.G6605 Trifolium pratense HOM05D000208 ORTHO05D000130 3.5e-13 78.2 86 48.8
Ca_27317_v3 Cicer arietinum L. HOM05D000208 ORTHO05D000130 5.9e-13 77.4 80 51.2
Medtr2g099560 Medicago truncatula HOM05D000208 ORTHO05D000130 1.0e-12 76.6 86 48.8
Glyma.15G026300 Glycine max HOM05D000208 ORTHO05D000130 1.3e-12 76.3 82 50.0
arahy.Tifrunner.gnm1.ann1.FRJ2WS Arachis hypogaea HOM05D000208 ORTHO05D000130 2.3e-12 75.5 84 50.0
Glyma.07G006750 Glycine max HOM05D000208 ORTHO05D000130 2.3e-12 75.5 81 49.4
Medtr8g018730 Medicago truncatula HOM05D000208 ORTHO05D000130 3.8e-12 74.7 80 50.0
Medtr8g018735 Medicago truncatula HOM05D000208 ORTHO05D000130 3.8e-12 74.7 77 51.9
Lj3g0012212 Lotus japonicus HOM05D000208 ORTHO05D000130 5.0e-12 74.3 75 56.0
Phvul.010G135500 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 5.0e-12 74.3 80 50.0
Psat5g291280 Pisum sativum HOM05D000208 ORTHO05D000130 5.0e-12 74.3 86 45.3
TPR.G7898 Trifolium pratense HOM05D000208 ORTHO05D000130 8.6e-12 73.6 80 50.0
arahy.Tifrunner.gnm1.ann1.PG0L05 Arachis hypogaea HOM05D000208 ORTHO05D000130 1.9e-11 72.4 80 62.5
VMungo0331G1918 Vigna mungo HOM05D000208 ORTHO05D000130 2.5e-11 72.0 81 50.6
Glyma.08G189500 Glycine max HOM05D000208 ORTHO05D000130 4.2e-11 71.2 81 46.9
Phvul.010G134800 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 7.2e-11 70.5 81 50.6
Psat4g184760 Pisum sativum HOM05D000208 ORTHO05D000130 7.2e-11 70.5 82 50.0
Phvul.005G156700 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 9.5e-11 70.1 87 47.1
TPR.G6544 Trifolium pratense HOM05D000208 ORTHO05D000130 9.5e-11 70.1 82 50.0
Ca_01224_v3 Cicer arietinum L. HOM05D000208 ORTHO05D000130 1.2e-10 69.7 80 46.2
Glyma.13G347500 Glycine max HOM05D000208 ORTHO05D000130 1.2e-10 69.7 90 48.9
Lj3g0026711 Lotus japonicus HOM05D000208 ORTHO05D000130 1.2e-10 69.7 84 47.6
Lalb_Chr25g0281001 Lupinus albus HOM05D000208 ORTHO05D000130 1.2e-10 69.7 73 54.8
VMungo0331G0830 Vigna mungo HOM05D000208 ORTHO05D000130 1.6e-10 69.3 83 45.8
TPR.G8395 Trifolium pratense HOM05D000208 ORTHO05D000130 2.8e-10 68.6 73 50.7
arahy.Tifrunner.gnm1.ann1.7U017G Arachis hypogaea HOM05D000208 ORTHO05D000130 3.6e-10 68.2 75 53.3
Phvul.010G134900 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 6.1e-10 67.4 87 46.0
Lalb_Chr01g0013531 Lupinus albus HOM05D000208 ORTHO05D000130 8.0e-10 67.0 90 44.4
Medtr5g024020 Medicago truncatula HOM05D000208 ORTHO05D000130 1.8e-09 65.9 77 48.1
Glyma.07G034800 Glycine max HOM05D000208 ORTHO05D000130 2.3e-09 65.5 87 54.0
arahy.Tifrunner.gnm1.ann1.AIGQ5R Arachis hypogaea HOM05D000208 ORTHO05D000130 3.0e-09 65.1 80 43.8
Psat2g149200 Pisum sativum HOM05D000208 ORTHO05D000130 4.0e-09 64.7 74 48.6
Ca_24974_v3 Cicer arietinum L. HOM05D000208 ORTHO05D000130 5.2e-09 64.3 77 53.2
arahy.Tifrunner.gnm1.ann1.VZ3VQN Arachis hypogaea HOM05D000208 ORTHO05D000130 6.8e-09 63.9 75 50.7
Glyma.07G006900 Glycine max HOM05D000208 ORTHO05D000130 6.8e-09 63.9 82 47.6
VMungo0331G1461 Vigna mungo HOM05D000208 ORTHO05D000130 8.9e-09 63.5 87 49.4
arahy.Tifrunner.gnm1.ann1.0UNU52 Arachis hypogaea HOM05D000208 ORTHO05D000130 1.2e-08 63.2 80 42.5
Glyma.15G026400 Glycine max HOM05D000208 ORTHO05D000130 1.2e-08 63.2 89 44.9
Lj3g0014870 Lotus japonicus HOM05D000208 ORTHO05D000130 1.2e-08 63.2 81 42.0
VMungo1080G0076 Vigna mungo HOM05D000208 ORTHO05D000130 1.2e-08 63.2 86 46.5
VMungo0331G0563 Vigna mungo HOM05D000208 ORTHO05D000130 1.5e-08 62.8 81 54.3
VMungo1080G0273 Vigna mungo HOM05D000208 ORTHO05D000130 2.0e-08 62.4 84 46.4
arahy.Tifrunner.gnm1.ann1.VPDB1U Arachis hypogaea HOM05D000208 ORTHO05D000130 2.6e-08 62.0 80 60.0
arahy.Tifrunner.gnm1.ann1.XSVY15 Arachis hypogaea HOM05D000208 ORTHO05D000130 3.4e-08 61.6 75 50.7
Lj3g0000478 Lotus japonicus HOM05D000208 ORTHO05D000130 4.4e-08 61.2 78 42.3
Medtr8g018430 Medicago truncatula HOM05D000208 ORTHO05D000130 4.4e-08 61.2 77 49.4
Phvul.005G156900 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 4.4e-08 61.2 89 43.8
VMungo0331G0490 Vigna mungo HOM05D000208 ORTHO05D000130 4.4e-08 61.2 89 41.6
Glyma.07G034900 Glycine max HOM05D000208 ORTHO05D000130 5.7e-08 60.8 84 39.3
Medtr8g018420 Medicago truncatula HOM05D000208 ORTHO05D000130 5.7e-08 60.8 73 52.1
Psat4g185080 Pisum sativum HOM05D000208 ORTHO05D000130 5.7e-08 60.8 75 52.0
Glyma.08G189400 Glycine max HOM05D000208 ORTHO05D000130 7.5e-08 60.5 78 46.2
Glyma.15G026500 Glycine max HOM05D000208 ORTHO05D000130 1.7e-07 59.3 77 49.4
Medtr8g018450 Medicago truncatula HOM05D000208 ORTHO05D000130 3.7e-07 58.2 77 46.8
VMungo0331G0529 Vigna mungo HOM05D000208 ORTHO05D000130 3.7e-07 58.2 88 56.8
arahy.Tifrunner.gnm1.ann1.GU7FRK Arachis hypogaea HOM05D000208 ORTHO05D000130 8.3e-07 57.0 75 49.3
Glyma.07G007000 Glycine max HOM05D000208 ORTHO05D000130 1.4e-06 56.2 98 39.8
Glyma.13G347700 Glycine max HOM05D000208 ORTHO05D000130 3.1e-06 55.1 76 46.1
Medtr3g081130 Medicago truncatula HOM05D000208 ORTHO05D000130 4.1e-06 54.7 78 42.3
Phvul.005G156800 Phaseolus vulgaris HOM05D000208 ORTHO05D000130 5.4e-06 54.3 86 39.5
Glyma.13G347800 Glycine max HOM05D000208 ORTHO05D000130 9.2e-06 53.5 83 42.2


User provided reference genes

Program Settings