Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 2.3e-41 171.8 86 100.0
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 1.5e-19 99.4 54 92.6
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 7.2e-19 97.1 54 88.9
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 2.7e-18 95.1 54 85.2
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 2.7e-18 95.1 54 85.2
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 2.7e-18 95.1 54 85.2
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 4.7e-18 94.4 62 75.8
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 6.1e-18 94.0 54 85.2
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 1.0e-17 93.2 54 83.3
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 1.0e-17 93.2 54 85.2
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 1.4e-17 92.8 54 81.5
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 2.3e-17 92.0 54 83.3
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 2.3e-17 92.0 54 81.5
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 2.3e-17 92.0 53 86.8
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 3.0e-17 91.7 53 84.9
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 4.0e-17 91.3 54 79.6
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 5.2e-17 90.9 62 75.8
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 5.2e-17 90.9 54 75.9
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 5.2e-17 90.9 54 79.6
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 6.8e-17 90.5 54 75.9
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 6.8e-17 90.5 54 81.5
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 1.2e-16 89.7 54 81.5
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 1.5e-16 89.4 54 81.5
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 1.5e-16 89.4 54 77.8
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 1.5e-16 89.4 54 79.6
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 2.0e-16 89.0 54 81.5
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 2.0e-16 89.0 66 68.2
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 2.6e-16 88.6 57 77.2
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 2.6e-16 88.6 53 75.5
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 2.6e-16 88.6 53 75.5
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 3.4e-16 88.2 54 79.6
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 3.4e-16 88.2 54 79.6
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 3.4e-16 88.2 54 79.6
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 4.4e-16 87.8 68 61.8
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 5.7e-16 87.4 54 77.8
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 5.7e-16 87.4 54 77.8
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 5.7e-16 87.4 54 75.9
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 7.5e-16 87.0 53 77.4
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 9.8e-16 86.7 61 67.2
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 9.8e-16 86.7 54 79.6
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 9.8e-16 86.7 54 77.8
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 1.7e-15 85.9 68 64.7
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 1.7e-15 85.9 54 75.9
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 1.7e-15 85.9 54 75.9
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 1.7e-15 85.9 54 72.2
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 2.2e-15 85.5 53 77.4
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 2.2e-15 85.5 53 77.4
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 2.2e-15 85.5 54 81.5
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 2.8e-15 85.1 54 75.9
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 2.8e-15 85.1 70 61.4
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 2.8e-15 85.1 53 77.4
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 3.7e-15 84.7 68 66.2
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 3.7e-15 84.7 56 71.4
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 3.7e-15 84.7 54 74.1
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 3.7e-15 84.7 63 69.8
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 4.8e-15 84.3 53 73.6
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 8.3e-15 83.6 53 71.7
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 8.3e-15 83.6 54 75.9
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 1.1e-14 83.2 54 72.2
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 1.1e-14 83.2 56 69.6
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 1.1e-14 83.2 54 75.9
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 1.4e-14 82.8 54 72.2
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 1.4e-14 82.8 54 72.2
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 1.8e-14 82.4 53 75.5
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 1.8e-14 82.4 54 75.9
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 1.8e-14 82.4 54 74.1
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 1.8e-14 82.4 54 70.4
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 1.8e-14 82.4 53 75.5
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 1.8e-14 82.4 54 74.1
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 2.4e-14 82.0 57 73.7
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 3.1e-14 81.6 54 70.4
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 4.1e-14 81.3 54 70.4
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 4.1e-14 81.3 54 70.4
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 4.1e-14 81.3 54 70.4
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 4.1e-14 81.3 54 70.4
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 4.1e-14 81.3 54 70.4
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 4.1e-14 81.3 53 75.5
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 7.0e-14 80.5 53 71.7
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 7.0e-14 80.5 54 74.1
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 7.0e-14 80.5 53 73.6
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 9.1e-14 80.1 54 68.5
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 9.1e-14 80.1 53 71.7
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 9.1e-14 80.1 53 71.7
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 9.1e-14 80.1 54 70.4
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 1.2e-13 79.7 54 74.1
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 1.2e-13 79.7 53 69.8
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 1.6e-13 79.3 54 72.2
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 1.6e-13 79.3 53 71.7
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 2.0e-13 79.0 54 68.5
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 2.7e-13 78.6 54 66.7
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 2.7e-13 78.6 53 69.8
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 2.7e-13 78.6 53 71.7
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 2.7e-13 78.6 54 66.7
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 3.5e-13 78.2 53 71.7
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 3.5e-13 78.2 54 66.7
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 4.5e-13 77.8 54 66.7
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 1.0e-12 76.6 53 69.8
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 1.3e-12 76.3 54 64.8
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 1.3e-12 76.3 52 69.2
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 3.8e-12 74.7 52 67.3
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 3.8e-12 74.7 53 69.8
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 6.6e-12 73.9 54 61.1
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 1.1e-11 73.2 52 67.3
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 3.3e-11 71.6 45 77.8
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 4.2e-11 71.2 53 64.2
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 1.6e-10 69.3 52 61.5
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 3.0e-09 65.1 65 46.2
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 1.5e-08 62.8 52 55.8
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 2.0e-08 62.4 69 44.9


User provided reference genes

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