Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22621 Trifolium pratense HOM05D000141 ORTHO05D036973 5.7e-37 157.1 83 100.0
TPR.G27157 Trifolium pratense HOM05D000141 ORTHO05D001311 1.3e-20 102.8 66 83.3
Medtr2g069950 Medicago truncatula HOM05D000141 ORTHO05D001311 2.8e-20 101.7 69 76.8
Ca_03483_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001311 4.8e-20 100.9 69 78.3
Psat1g009760 Pisum sativum HOM05D000141 ORTHO05D001311 1.4e-19 99.4 70 72.9
Glyma.08G174300 Glycine max HOM05D000141 ORTHO05D001311 8.5e-17 90.1 66 72.7
Glyma.15G252800 Glycine max HOM05D000141 ORTHO05D001311 8.5e-17 90.1 66 72.7
arahy.Tifrunner.gnm1.ann1.RXP99Y Arachis hypogaea HOM05D000141 ORTHO05D001311 1.9e-16 89.0 66 69.7
Lj3g0018650 Lotus japonicus HOM05D000141 ORTHO05D001311 4.2e-16 87.8 66 66.7
arahy.Tifrunner.gnm1.ann1.36GBYI Arachis hypogaea HOM05D000141 ORTHO05D001311 5.5e-16 87.4 66 69.7
Lalb_Chr25g0285251 Lupinus albus HOM05D000141 ORTHO05D001311 1.2e-15 86.3 66 68.2
Phvul.005G054500 Phaseolus vulgaris HOM05D000141 ORTHO05D001311 2.1e-15 85.5 66 68.2
HanXRQChr10g0306651 Helianthus annuus HOM05D000141 ORTHO05D001311 1.4e-14 82.8 76 56.6
VMungo1080G0426 Vigna mungo HOM05D000141 ORTHO05D001311 2.3e-14 82.0 66 65.2
ECA234G2348 Erigeron canadensis HOM05D000141 ORTHO05D001311 8.8e-14 80.1 66 60.6
TWI38G2413 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 1.5e-13 79.3 69 62.3
Cpa.g.sc229.5 Carica papaya HOM05D000141 ORTHO05D001311 7.5e-13 77.0 69 58.0
FvH4_3g16110 Fragaria vesca HOM05D000141 ORTHO05D001311 9.8e-13 76.6 69 58.0
FAN11G1205 Fragaria x ananassa HOM05D000141 ORTHO05D001311 9.8e-13 76.6 69 58.0
FAN16G3344 Fragaria x ananassa HOM05D000141 ORTHO05D001311 1.3e-12 76.3 69 58.0
FAN25G3242 Fragaria x ananassa HOM05D000141 ORTHO05D001311 1.3e-12 76.3 69 58.0
Manes.15G101400 Manihot esculenta HOM05D000141 ORTHO05D001311 2.8e-12 75.1 76 52.6
Rhsim06G0183600 Rhododendron simsii HOM05D000141 ORTHO05D001311 2.8e-12 75.1 69 55.1
PGR031G0118 Punica granatum HOM05D000141 ORTHO05D001311 3.7e-12 74.7 69 59.4
Manes.03G090900 Manihot esculenta HOM05D000141 ORTHO05D001311 4.8e-12 74.3 69 56.5
Duzib213G0002 Durio zibethinus HOM05D000141 ORTHO05D001311 8.3e-12 73.6 69 53.6
Potri.001G436200 Populus trichocarpa HOM05D000141 ORTHO05D001311 8.3e-12 73.6 69 58.0
Atru.chr2.1843 Acer truncatum HOM05D000141 ORTHO05D001311 1.1e-11 73.2 76 52.6
Gohir.A01G036700 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.1e-11 73.2 69 53.6
Lalb_Chr20g0108861 Lupinus albus HOM05D000141 ORTHO05D001311 1.1e-11 73.2 67 59.7
Oeu012710.1 Olea europaea HOM05D000141 ORTHO05D036973 1.1e-11 73.2 67 58.2
Cfa019444 Carpinus fangiana HOM05D000141 ORTHO05D001311 1.4e-11 72.8 66 56.1
Actinidia12333 Actinidia chinensis HOM05D000141 ORTHO05D001311 1.8e-11 72.4 69 52.2
CiPaw.12G006000 Carya illinoinensis HOM05D000141 ORTHO05D001311 1.8e-11 72.4 69 55.1
THA.LOC104812281 Tarenaya hassleriana HOM05D000141 ORTHO05D001311 1.8e-11 72.4 69 55.1
Actinidia20594 Actinidia chinensis HOM05D000141 ORTHO05D001311 2.4e-11 72.0 69 52.2
Ciclev10018793m.g Citrus clementina HOM05D000141 ORTHO05D001311 2.4e-11 72.0 76 51.3
Haze_08513 Corylus avellana HOM05D000141 ORTHO05D001311 2.4e-11 72.0 69 52.2
Prupe.4G144400 Prunus persica HOM05D000141 ORTHO05D001311 2.4e-11 72.0 69 53.6
Aa31LG4G2630 Aethionema arabicum HOM05D000141 ORTHO05D001311 3.1e-11 71.6 76 50.0
RcHm_v2.0_Chr5g0027091 Rosa chinensis HOM05D000141 ORTHO05D001311 3.1e-11 71.6 69 55.1
Lsat_1_v5_gn_5_121381 Lactuca sativa HOM05D000141 ORTHO05D001311 4.1e-11 71.2 60 58.3
Dinv26638 Davidia involucrata HOM05D000141 ORTHO05D001311 5.4e-11 70.9 69 53.6
Sabra11G0126100 Salix brachista HOM05D000141 ORTHO05D001311 5.4e-11 70.9 69 55.1
GSVIVG01020503001 Vitis vinifera HOM05D000141 ORTHO05D001311 5.4e-11 70.9 67 53.7
MD05G1213600 Malus domestica HOM05D000141 ORTHO05D001311 7.0e-11 70.5 69 53.6
Potri.011G140000 Populus trichocarpa HOM05D000141 ORTHO05D001311 7.0e-11 70.5 69 55.1
Gohir.D01G024000 Gossypium hirsutum HOM05D000141 ORTHO05D001311 9.1e-11 70.1 69 52.2
Gorai.002G032500 Gossypium raimondii HOM05D000141 ORTHO05D001311 9.1e-11 70.1 69 52.2
vmacro12029 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 2.0e-10 68.9 69 52.2
Thecc.07G157900 Theobroma cacao HOM05D000141 ORTHO05D001311 3.5e-10 68.2 69 50.7
CANSAT56G4238 Cannabis sativa HOM05D000141 ORTHO05D001311 4.5e-10 67.8 69 52.2
Lj1C805T5 Lonicera japonica HOM05D000141 ORTHO05D001311 4.5e-10 67.8 69 50.7
BcaB05g24734 Brassica carinata HOM05D000141 ORTHO05D001311 5.9e-10 67.4 69 50.7
Migut.M00669 Erythranthe guttata HOM05D000141 ORTHO05D001311 5.9e-10 67.4 69 50.7
MD10G1197400 Malus domestica HOM05D000141 ORTHO05D001311 5.9e-10 67.4 69 52.2
AL2G31920 Arabidopsis lyrata HOM05D000141 ORTHO05D001311 7.7e-10 67.0 76 47.4
MSTRG.14999 Avicennia marina HOM05D000141 ORTHO05D001311 7.7e-10 67.0 69 47.8
QL04p072968 Quercus lobata HOM05D000141 ORTHO05D001311 7.7e-10 67.0 66 54.5
BcaC03g15359 Brassica carinata HOM05D000141 ORTHO05D001311 1.0e-09 66.6 71 49.3
C02p29670 Brassica napus HOM05D000141 ORTHO05D001311 1.0e-09 66.6 71 49.3
COL.COLO4_07051 Corchorus olitorius HOM05D000141 ORTHO05D001311 1.3e-09 66.2 69 49.3
DCAR_019643 Daucus carota HOM05D000141 ORTHO05D001311 1.3e-09 66.2 76 47.4
Sp5g27340 Schrenkiella parvula HOM05D000141 ORTHO05D001311 1.3e-09 66.2 69 50.7
A02p17850 Brassica napus HOM05D000141 ORTHO05D001311 1.7e-09 65.9 69 50.7
BolC2t09016H Brassica oleracea HOM05D000141 ORTHO05D001311 1.7e-09 65.9 69 50.7
BraA02t06835Z Brassica rapa HOM05D000141 ORTHO05D001311 1.7e-09 65.9 69 50.7
AT1G72250 Arabidopsis thaliana HOM05D000141 ORTHO05D001311 2.2e-09 65.5 76 46.1
Thhalv10018049m.g Eutrema salsugineum HOM05D000141 ORTHO05D001311 2.2e-09 65.5 76 47.4
Solyc12g011290.2 Solanum lycopersicum HOM05D000141 ORTHO05D001311 2.2e-09 65.5 70 50.0
CARHR065110 Cardamine hirsuta HOM05D000141 ORTHO05D001311 3.8e-09 64.7 76 44.7
Cc05_g10030 Coffea canephora HOM05D000141 ORTHO05D001311 3.8e-09 64.7 69 50.7
Sopen12g006620 Solanum pennellii HOM05D000141 ORTHO05D001311 3.8e-09 64.7 70 50.0
SGA_v2.0_scaffold181G39773 Striga asiatica HOM05D000141 ORTHO05D001311 3.8e-09 64.7 77 44.2
Aqoxy4G00059 Aquilegia oxysepala HOM05D000141 ORTHO05D001311 5.0e-09 64.3 69 47.8
BcaB03g14969 Brassica carinata HOM05D000141 ORTHO05D001311 5.0e-09 64.3 69 49.3
BcaC08g46672 Brassica carinata HOM05D000141 ORTHO05D001311 6.5e-09 63.9 69 50.7
A07p38380 Brassica napus HOM05D000141 ORTHO05D001311 6.5e-09 63.9 69 50.7
C06p46420 Brassica napus HOM05D000141 ORTHO05D001311 6.5e-09 63.9 69 50.7
BolC6t39689H Brassica oleracea HOM05D000141 ORTHO05D001311 6.5e-09 63.9 69 50.7
BraA07t31399Z Brassica rapa HOM05D000141 ORTHO05D001311 6.5e-09 63.9 69 50.7
Carub.0002s1906 Capsella rubella HOM05D000141 ORTHO05D001311 6.5e-09 63.9 76 44.7
Eucgr.F03192 Eucalyptus grandis HOM05D000141 ORTHO05D001311 6.5e-09 63.9 77 44.2
CANSAT56G1181 Cannabis sativa HOM05D000141 ORTHO05D001311 8.5e-09 63.5 69 49.3
Nitab4.5_0000639g0260 Nicotiana tabacum HOM05D000141 ORTHO05D001311 1.1e-08 63.2 70 50.0
SalBow8G4088 Salvia bowleyana HOM05D000141 ORTHO05D001311 1.1e-08 63.2 69 47.8
Thecc.07G158700 Theobroma cacao HOM05D000141 ORTHO05D001311 1.5e-08 62.8 69 47.8
CAN.G164.4 Capsicum annuum HOM05D000141 ORTHO05D001311 3.2e-08 61.6 70 45.7
Nn3g20438 Nelumbo nucifera HOM05D000141 ORTHO05D001311 4.2e-08 61.2 69 44.9
PSO541G4054 Papaver somniferum HOM05D000141 ORTHO05D001311 4.2e-08 61.2 69 47.8
Sabra14G0097900 Salix brachista HOM05D000141 ORTHO05D036973 7.2e-08 60.5 58 55.2
ClCG07G010630 Citrullus lanatus HOM05D000141 ORTHO05D001311 1.6e-07 59.3 69 46.4
Sed0022606 Sechium edule HOM05D000141 ORTHO05D001311 2.1e-07 58.9 69 44.9
EL10Ac4g08530 Beta vulgaris HOM05D000141 ORTHO05D001311 2.7e-07 58.5 68 44.1
Peaxi162Scf00000g00587 Petunia axillaris HOM05D000141 ORTHO05D001311 3.6e-07 58.2 69 44.9
TAR624G0806 Trochodendron aralioides HOM05D000141 ORTHO05D001311 3.6e-07 58.2 69 43.5
AUR62042369 Chenopodium quinoa HOM05D000141 ORTHO05D001311 4.7e-07 57.8 68 42.6
MELO3C016173.2 Cucumis melo HOM05D000141 ORTHO05D001311 4.7e-07 57.8 69 44.9
MBI02_g29871_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D001311 4.7e-07 57.8 69 42.0
CsaV3_4G007670 Cucumis sativus L. HOM05D000141 ORTHO05D001311 8.0e-07 57.0 69 43.5
Sed0016222 Sechium edule HOM05D000141 ORTHO05D001311 8.0e-07 57.0 76 39.5
HPP92_001888 Vanilla planifolia HOM05D000141 ORTHO05D001311 1.0e-06 56.6 74 44.6
AUR62037929 Chenopodium quinoa HOM05D000141 ORTHO05D001311 2.3e-06 55.5 77 39.0
TAR512G0002 Trochodendron aralioides HOM05D000141 ORTHO05D001311 2.3e-06 55.5 69 40.6
PSO675G5927 Papaver somniferum HOM05D000141 ORTHO05D001311 3.0e-06 55.1 65 49.2


User provided reference genes

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