Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22606 Trifolium pratense HOM05D000196 ORTHO05D026204 4.2e-71 271.2 130 100.0
TPR.G31417 Trifolium pratense HOM05D000196 ORTHO05D026204 1.5e-52 209.5 112 89.3
TPR.G5592 Trifolium pratense HOM05D000196 ORTHO05D026204 3.4e-52 208.4 112 89.3
TPR.G9247 Trifolium pratense HOM05D000196 ORTHO05D026204 1.6e-41 172.9 94 88.3
TPR.G33649 Trifolium pratense HOM05D000196 ORTHO05D026204 7.8e-25 117.5 110 56.4
Medtr4g021790 Medicago truncatula HOM05D000196 ORTHO05D000279 4.4e-20 101.7 107 51.4
Medtr4g021845 Medicago truncatula HOM05D000196 ORTHO05D000279 7.6e-20 100.9 107 50.5
Medtr4g021855 Medicago truncatula HOM05D000196 ORTHO05D000279 1.9e-18 96.3 107 48.6
Medtr4g021760 Medicago truncatula HOM05D000196 ORTHO05D000279 3.0e-16 89.0 124 41.1
Medtr5g055260 Medicago truncatula HOM05D000196 ORTHO05D000279 2.5e-15 85.9 116 39.7
Psat7g006800 Pisum sativum HOM05D000196 ORTHO05D000279 1.2e-12 77.0 127 37.8
TPR.G19267 Trifolium pratense HOM05D000196 ORTHO05D000279 3.4e-12 75.5 107 38.3
TPR.G27427 Trifolium pratense HOM05D000196 ORTHO05D000279 5.8e-12 74.7 99 41.4
TPR.G34996 Trifolium pratense HOM05D000196 ORTHO05D000279 2.2e-11 72.8 99 40.4
Lj4g0014533 Lotus japonicus HOM05D000196 ORTHO05D000279 2.9e-11 72.4 126 36.5
Medtr8g105600 Medicago truncatula HOM05D000196 ORTHO05D000279 3.8e-11 72.0 121 33.1
Ca_26822_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 4.9e-11 71.6 95 45.3
TPR.G40088 Trifolium pratense HOM05D000196 ORTHO05D000279 4.9e-11 71.6 100 39.0
TPR.G613 Trifolium pratense HOM05D000196 ORTHO05D012687 6.4e-11 71.2 68 51.5
TPR.G17477 Trifolium pratense HOM05D000196 ORTHO05D000279 8.4e-11 70.9 100 39.0
TPR.G28021 Trifolium pratense HOM05D000196 ORTHO05D000279 8.4e-11 70.9 99 40.4
Medtr6g016850 Medicago truncatula HOM05D000196 ORTHO05D012687 1.1e-10 70.5 122 33.6
TPR.G1051 Trifolium pratense HOM05D000196 ORTHO05D000279 2.4e-10 69.3 99 40.4
TPR.G19266 Trifolium pratense HOM05D000196 ORTHO05D000279 1.2e-09 67.0 99 38.4
VMungo1127G0927 Vigna mungo HOM05D000196 ORTHO05D012687 4.6e-09 65.1 114 35.1
Ca_27355_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 6.0e-09 64.7 107 36.4
Glyma.08G046700 Glycine max HOM05D000196 ORTHO05D000279 6.0e-09 64.7 115 34.8
MBI06_g17104_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 6.0e-09 64.7 116 35.3
ATR0706G279 Amborella trichopoda HOM05D000196 ORTHO05D000279 1.0e-08 63.9 101 38.6
Medtr8g093040 Medicago truncatula HOM05D000196 ORTHO05D000279 1.7e-08 63.2 115 33.9
Psat4g173920 Pisum sativum HOM05D000196 ORTHO05D026062 1.7e-08 63.2 107 38.3
Aqoxy3G01383 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 3.0e-08 62.4 102 37.3
TPR.G19795 Trifolium pratense HOM05D000196 ORTHO05D000279 3.0e-08 62.4 100 39.0
FvH4_4g24870 Fragaria vesca HOM05D000196 ORTHO05D000279 3.9e-08 62.0 123 34.1
FAN12G1578 Fragaria x ananassa HOM05D000196 ORTHO05D000279 3.9e-08 62.0 123 34.1
FAN17G0435 Fragaria x ananassa HOM05D000196 ORTHO05D000279 3.9e-08 62.0 123 34.1
FAN22G0298 Fragaria x ananassa HOM05D000196 ORTHO05D000279 3.9e-08 62.0 123 34.1
CiPaw.05G175000 Carya illinoinensis HOM05D000196 ORTHO05D000279 5.1e-08 61.6 120 34.2
PSO017G0209 Papaver somniferum HOM05D000196 ORTHO05D000279 5.1e-08 61.6 106 35.8
PSO478G3674 Papaver somniferum HOM05D000196 ORTHO05D000279 5.1e-08 61.6 106 35.8
VMungo1127G2042 Vigna mungo HOM05D000196 ORTHO05D012687 5.1e-08 61.6 109 35.8
MBI19_g41132_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 6.6e-08 61.2 100 39.0
Rhsim12G0107500 Rhododendron simsii HOM05D000196 ORTHO05D000279 6.6e-08 61.2 117 35.0
VMungo0251G1946 Vigna mungo HOM05D000196 ORTHO05D012687 6.6e-08 61.2 107 37.4
Manes.03G201000 Manihot esculenta HOM05D000196 ORTHO05D000279 1.1e-07 60.5 100 38.0
SalBow2G1838 Salvia bowleyana HOM05D000196 ORTHO05D000279 1.1e-07 60.5 116 35.3
Psat7g235520 Pisum sativum HOM05D000196 ORTHO05D026062 1.9e-07 59.7 107 37.4
Prupe.1G238200 Prunus persica HOM05D000196 ORTHO05D000279 1.9e-07 59.7 122 33.6
Aqoxy5G03591 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 2.5e-07 59.3 104 34.6
Potri.008G181000 Populus trichocarpa HOM05D000196 ORTHO05D000279 3.3e-07 58.9 122 33.6
Phvul.011G008200 Phaseolus vulgaris HOM05D000196 ORTHO05D000279 4.3e-07 58.5 97 35.1
Lj1g0014074 Lotus japonicus HOM05D000196 ORTHO05D000279 5.6e-07 58.2 99 35.4
Psat7g235640 Pisum sativum HOM05D000196 ORTHO05D026062 5.6e-07 58.2 99 38.4
FAN07G0840 Fragaria x ananassa HOM05D000196 ORTHO05D000279 7.3e-07 57.8 123 33.3
QL03p036146 Quercus lobata HOM05D000196 ORTHO05D000279 7.3e-07 57.8 100 39.0
TPR.G7536 Trifolium pratense HOM05D000196 ORTHO05D000279 7.3e-07 57.8 91 39.6
CAN.G49.15 Capsicum annuum HOM05D000196 ORTHO05D000279 9.6e-07 57.4 124 33.1
RcHm_v2.0_Chr4g0431941 Rosa chinensis HOM05D000196 ORTHO05D000279 9.6e-07 57.4 123 33.3
Cc11_g07720 Coffea canephora HOM05D000196 ORTHO05D000279 1.3e-06 57.0 100 41.0
Manes.06G064200 Manihot esculenta HOM05D000196 ORTHO05D000279 1.3e-06 57.0 100 33.0
Medtr1g032570 Medicago truncatula HOM05D000196 ORTHO05D000279 1.3e-06 57.0 122 32.0
QL08p050689 Quercus lobata HOM05D000196 ORTHO05D000279 1.3e-06 57.0 107 31.8
CANSAT01G1507 Cannabis sativa HOM05D000196 ORTHO05D000279 1.6e-06 56.6 106 34.0
Lj2g0001554 Lotus japonicus HOM05D000196 ORTHO05D000279 1.6e-06 56.6 120 32.5
Lj2g0013191 Lotus japonicus HOM05D000196 ORTHO05D000279 1.6e-06 56.6 120 32.5
Lj2g0025525 Lotus japonicus HOM05D000196 ORTHO05D000279 1.6e-06 56.6 120 32.5
MD00G1165700 Malus domestica HOM05D000196 ORTHO05D000279 2.1e-06 56.2 123 33.3
MD13G1108300 Malus domestica HOM05D000196 ORTHO05D000279 2.1e-06 56.2 123 33.3
Ca_12530_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 2.8e-06 55.8 115 33.0
MD16G1108400 Malus domestica HOM05D000196 ORTHO05D000279 2.8e-06 55.8 122 32.0
Phvul.002G322300 Phaseolus vulgaris HOM05D000196 ORTHO05D012687 2.8e-06 55.8 112 33.9
TPR.G36946 Trifolium pratense HOM05D000196 ORTHO05D000279 2.8e-06 55.8 122 32.0
Zm00001eb144290 Zea mays HOM05D000196 ORTHO05D000279 2.8e-06 55.8 129 31.8
Atru.chr11.2213 Acer truncatum HOM05D000196 ORTHO05D000279 3.6e-06 55.5 122 32.0
Ca_19988_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 3.6e-06 55.5 108 36.1
Ca_19990_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 3.6e-06 55.5 108 36.1
Glyma.19G047900 Glycine max HOM05D000196 ORTHO05D000279 3.6e-06 55.5 117 32.5
Gohir.D01G023514 Gossypium hirsutum HOM05D000196 ORTHO05D000279 4.8e-06 55.1 99 35.4
Gorai.002G029300 Gossypium raimondii HOM05D000196 ORTHO05D000279 4.8e-06 55.1 99 35.4
Migut.E00489 Erythranthe guttata HOM05D000196 ORTHO05D000279 6.2e-06 54.7 100 37.0
CARHR182340 Cardamine hirsuta HOM05D000196 ORTHO05D000279 8.1e-06 54.3 116 30.2
Glyma.05G239800 Glycine max HOM05D000196 ORTHO05D000279 8.1e-06 54.3 107 32.7


User provided reference genes

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