Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22580 Trifolium pratense HOM05D003174 ORTHO05D003439 5.9e-262 907.1 508 100.0
Medtr1g069015 Medicago truncatula HOM05D003174 ORTHO05D003439 2.0e-92 344.0 413 52.5
Medtr1g069020 Medicago truncatula HOM05D003174 ORTHO05D003439 5.1e-72 276.2 450 42.7
Psat0s2930g0040 Pisum sativum HOM05D003174 ORTHO05D003439 8.5e-67 258.8 434 41.9
Lj1g0011268 Lotus japonicus HOM05D003174 ORTHO05D003439 9.4e-58 228.8 467 36.0
Glyma.13G131100 Glycine max HOM05D003174 ORTHO05D003439 5.9e-52 209.5 402 36.6
Glyma.10G043400 Glycine max HOM05D003174 ORTHO05D003439 1.1e-42 178.7 197 49.7
TPR.G723 Trifolium pratense HOM05D003174 ORTHO05D003439 7.2e-42 176.0 304 43.4
arahy.Tifrunner.gnm1.ann1.IJS1VI Arachis hypogaea HOM05D003174 ORTHO05D003439 4.5e-36 156.8 201 44.8
arahy.Tifrunner.gnm1.ann1.Y7W1NJ Arachis hypogaea HOM05D003174 ORTHO05D003439 5.0e-35 153.3 200 43.0
arahy.Tifrunner.gnm1.ann1.FD13B1 Arachis hypogaea HOM05D003174 ORTHO05D003439 1.1e-34 152.1 201 44.3
Lalb_Chr06g0170971 Lupinus albus HOM05D003174 ORTHO05D003439 1.5e-34 151.8 221 43.4
VMungo1127G0815 Vigna mungo HOM05D003174 ORTHO05D003439 5.7e-31 139.8 247 36.0
arahy.Tifrunner.gnm1.ann1.6UZP51 Arachis hypogaea HOM05D003174 ORTHO05D003439 9.8e-31 139.0 203 42.4
arahy.Tifrunner.gnm1.ann1.4Q6X4E Arachis hypogaea HOM05D003174 ORTHO05D003439 1.7e-19 101.7 200 35.5
Phvul.007G157300 Phaseolus vulgaris HOM05D003174 ORTHO05D003439 1.6e-17 95.1 125 40.8
Sed0000072 Sechium edule HOM05D003174 ORTHO05D003439 2.8e-17 94.4 103 43.7
Manes.08G078100 Manihot esculenta HOM05D003174 ORTHO05D003439 6.2e-17 93.2 185 33.5
MELO3C003115.2 Cucumis melo HOM05D003174 ORTHO05D003439 1.8e-16 91.7 139 40.3
CsaV3_4G024810 Cucumis sativus L. HOM05D003174 ORTHO05D003439 2.3e-16 91.3 119 40.3
MD04G1124900 Malus domestica HOM05D003174 ORTHO05D003439 3.1e-16 90.9 169 34.3
CSS0007124 Camellia sinensis var. sinensis HOM05D003174 ORTHO05D003439 5.2e-16 90.1 206 32.5
GSVIVG01034205001 Vitis vinifera HOM05D003174 ORTHO05D003439 1.2e-15 89.0 167 35.9
TWI53G0288 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 2.0e-15 88.2 121 39.7
Gohir.A09G157600 Gossypium hirsutum HOM05D003174 ORTHO05D003439 3.4e-15 87.4 226 31.0
Gohir.D09G152900 Gossypium hirsutum HOM05D003174 ORTHO05D003439 3.4e-15 87.4 178 32.6
Gorai.006G174400 Gossypium raimondii HOM05D003174 ORTHO05D003439 5.8e-15 86.7 226 30.5
Carub.0006s0132 Capsella rubella HOM05D003174 ORTHO05D003439 1.3e-14 85.5 142 35.2
Cfa017411 Carpinus fangiana HOM05D003174 ORTHO05D003439 2.9e-14 84.3 206 28.6
Thecc.05G042400 Theobroma cacao HOM05D003174 ORTHO05D003439 2.9e-14 84.3 110 40.0
TPR.G29857 Trifolium pratense HOM05D003174 ORTHO05D003439 2.9e-14 84.3 91 51.6
Haze_20757 Corylus avellana HOM05D003174 ORTHO05D003439 3.7e-14 84.0 208 26.0
Duzib106G0893 Durio zibethinus HOM05D003174 ORTHO05D003439 3.7e-14 84.0 137 36.5
Peaxi162Scf00165g01840 Petunia axillaris HOM05D003174 ORTHO05D003439 1.1e-13 82.4 179 32.4
arahy.Tifrunner.gnm1.ann1.QHLS1J Arachis hypogaea HOM05D003174 ORTHO05D003439 1.9e-13 81.6 201 31.3
Actinidia11253 Actinidia chinensis HOM05D003174 ORTHO05D003439 3.2e-13 80.9 104 39.4
AL6G11780 Arabidopsis lyrata HOM05D003174 ORTHO05D003439 3.2e-13 80.9 151 33.8
Nn2g10415 Nelumbo nucifera HOM05D003174 ORTHO05D003439 4.1e-13 80.5 207 30.0
AT5G02520 Arabidopsis thaliana HOM05D003174 ORTHO05D003439 5.4e-13 80.1 151 32.5
Ciclev10011079m.g Citrus clementina HOM05D003174 ORTHO05D003439 7.1e-13 79.7 133 36.1
TAR623G0639 Trochodendron aralioides HOM05D003174 ORTHO05D003439 1.6e-12 78.6 149 34.9
CAN.G97.37 Capsicum annuum HOM05D003174 ORTHO05D003439 2.1e-12 78.2 128 32.0
COL.COLO4_14835 Corchorus olitorius HOM05D003174 ORTHO05D003439 2.7e-12 77.8 108 38.9
HanXRQChr08g0226171 Helianthus annuus HOM05D003174 ORTHO05D003439 7.8e-12 76.3 220 28.2
Prupe.6G252000 Prunus persica HOM05D003174 ORTHO05D003439 7.8e-12 76.3 168 32.7
Cpa.g.sc260.5 Carica papaya HOM05D003174 ORTHO05D003439 1.0e-11 75.9 120 37.5
Dinv35623 Davidia involucrata HOM05D003174 ORTHO05D003439 1.0e-11 75.9 98 38.8
MSTRG.924 Avicennia marina HOM05D003174 ORTHO05D003439 1.3e-11 75.5 127 34.6
PGSC0003DMG400008848 Solanum tuberosum HOM05D003174 ORTHO05D003439 1.7e-11 75.1 164 30.5
Sp6g39990 Schrenkiella parvula HOM05D003174 ORTHO05D003439 2.3e-11 74.7 124 34.7
Rhsim05G0189700 Rhododendron simsii HOM05D003174 ORTHO05D003439 3.0e-11 74.3 103 36.9
Eucgr.A00550 Eucalyptus grandis HOM05D003174 ORTHO05D003439 3.9e-11 73.9 107 38.3
Aa31LG1G22280 Aethionema arabicum HOM05D003174 ORTHO05D003439 8.6e-11 72.8 128 33.6
Dinv22692 Davidia involucrata HOM05D003174 ORTHO05D003439 8.6e-11 72.8 170 31.8
ECA233G2094 Erigeron canadensis HOM05D003174 ORTHO05D003439 8.6e-11 72.8 118 34.7
MBI17_g16533_MAGBIO Magnolia biondii HOM05D003174 ORTHO05D003439 8.6e-11 72.8 127 33.9
QL07p031124 Quercus lobata HOM05D003174 ORTHO05D003439 8.6e-11 72.8 136 31.6
QL07p047847 Quercus lobata HOM05D003174 ORTHO05D003439 8.6e-11 72.8 136 31.6
CANSAT21G1894 Cannabis sativa HOM05D003174 ORTHO05D003439 1.1e-10 72.4 96 36.5
SGA_v2.0_scaffold6G03139 Striga asiatica HOM05D003174 ORTHO05D003439 1.1e-10 72.4 109 35.8
Actinidia35877 Actinidia chinensis HOM05D003174 ORTHO05D003439 2.5e-10 71.2 168 30.4
Nitab4.5_0000761g0050 Nicotiana tabacum HOM05D003174 ORTHO05D003439 2.5e-10 71.2 148 29.7
TAR629G3457 Trochodendron aralioides HOM05D003174 ORTHO05D003439 2.5e-10 71.2 149 32.2
Migut.C00381 Erythranthe guttata HOM05D003174 ORTHO05D003439 4.3e-10 70.5 111 34.2
THA.LOC104816287 Tarenaya hassleriana HOM05D003174 ORTHO05D003439 4.3e-10 70.5 141 29.8
TPR.G23103 Trifolium pratense HOM05D003174 ORTHO05D003439 4.3e-10 70.5 79 53.2
Nitab4.5_0004091g0070 Nicotiana tabacum HOM05D003174 ORTHO05D003439 7.3e-10 69.7 144 29.9
Ca_27793_v3 Cicer arietinum L. HOM05D003174 ORTHO05D003439 9.5e-10 69.3 121 37.2
Nn1g09826 Nelumbo nucifera HOM05D003174 ORTHO05D003439 1.2e-09 68.9 120 34.2
PSO339G3795 Papaver somniferum HOM05D003174 ORTHO05D003439 1.2e-09 68.9 238 26.1
vmacro08698 Vaccinium macrocarpon HOM05D003174 ORTHO05D003439 1.2e-09 68.9 96 37.5
GSVIVG01013578001 Vitis vinifera HOM05D003174 ORTHO05D003439 1.2e-09 68.9 131 32.1
BcaB05g21888 Brassica carinata HOM05D003174 ORTHO05D003439 1.6e-09 68.6 115 34.8
CARHR210840 Cardamine hirsuta HOM05D003174 ORTHO05D003439 2.1e-09 68.2 135 28.1
Thhalv10015290m.g Eutrema salsugineum HOM05D003174 ORTHO05D003439 2.1e-09 68.2 110 32.7
Gorai.004G087600 Gossypium raimondii HOM05D003174 ORTHO05D003439 2.8e-09 67.8 131 32.8
Gohir.D08G083400 Gossypium hirsutum HOM05D003174 ORTHO05D003439 3.6e-09 67.4 131 32.8
BraA02t04720Z Brassica rapa HOM05D003174 ORTHO05D003439 4.7e-09 67.0 103 35.0
Gohir.A08G074200 Gossypium hirsutum HOM05D003174 ORTHO05D003439 6.2e-09 66.6 131 32.1
Potri.004G077400 Populus trichocarpa HOM05D003174 ORTHO05D003439 6.2e-09 66.6 133 29.3
PSO384G3329 Papaver somniferum HOM05D035235 ORTHO05D003439 8.1e-09 66.2 240 26.2
arahy.Tifrunner.gnm1.ann1.QN9Q3M Arachis hypogaea HOM05D003174 ORTHO05D003439 1.1e-08 65.9 119 40.3
Sabra04G0051000 Salix brachista HOM05D003174 ORTHO05D003439 1.1e-08 65.9 130 30.0
BcaC03g13058 Brassica carinata HOM05D003174 ORTHO05D003439 1.4e-08 65.5 103 35.0
Sopen09g005270 Solanum pennellii HOM05D003174 ORTHO05D003439 1.4e-08 65.5 148 27.7
Lj3A970G57 Lonicera japonica HOM05D003174 ORTHO05D003439 1.8e-08 65.1 145 33.1
C02p00500 Brassica napus HOM05D003174 ORTHO05D003439 2.3e-08 64.7 99 35.4
Duzib093G0200 Durio zibethinus HOM05D003174 ORTHO05D003439 2.3e-08 64.7 130 30.8
Solyc09g010550.4 Solanum lycopersicum HOM05D003174 ORTHO05D003439 3.1e-08 64.3 115 33.0
Thecc.05G002600 Theobroma cacao HOM05D003174 ORTHO05D003439 3.1e-08 64.3 130 33.1
TAR362G1036 Trochodendron aralioides HOM05D003174 ORTHO05D003439 3.1e-08 64.3 138 34.1
Atru.chr3.1551 Acer truncatum HOM05D003174 ORTHO05D003439 4.0e-08 63.9 164 29.9
Hma1.2p1_0324F.1_g125650 Hydrangea macrophylla HOM05D003174 ORTHO05D003439 4.0e-08 63.9 148 33.1
Hma1.2p1_3259F.1_g334646 Hydrangea macrophylla HOM05D003174 ORTHO05D003439 4.0e-08 63.9 148 33.1
SHI12657 Sapria himalayana HOM05D003174 ORTHO05D003439 4.0e-08 63.9 139 30.9
BolC2t06049H Brassica oleracea HOM05D003174 ORTHO05D003439 5.2e-08 63.5 99 34.3
CiPaw.02G056500 Carya illinoinensis HOM05D003174 ORTHO05D003439 5.2e-08 63.5 126 32.5
PSO532G0060 Papaver somniferum HOM05D003174 ORTHO05D003439 5.2e-08 63.5 129 31.0
Cfa015779 Carpinus fangiana HOM05D003174 ORTHO05D003439 6.8e-08 63.2 126 31.7
Migut.H00512 Erythranthe guttata HOM05D003174 ORTHO05D003439 6.8e-08 63.2 137 32.8
Ciclev10021601m.g Citrus clementina HOM05D003174 ORTHO05D003439 1.2e-07 62.4 121 33.1
TWI15G0304 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 1.2e-07 62.4 133 32.3
TWI15G0472 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 1.2e-07 62.4 133 32.3
Eucgr.I00627 Eucalyptus grandis HOM05D003174 ORTHO05D003439 2.0e-07 61.6 113 32.7
PSO675G7155 Papaver somniferum HOM05D003174 ORTHO05D003439 2.0e-07 61.6 121 32.2
Aqoxy2G01410 Aquilegia oxysepala HOM05D003174 ORTHO05D003439 2.6e-07 61.2 105 31.4
Aqoxy4G02974 Aquilegia oxysepala HOM05D003051 ORTHO05D003932 2.6e-07 61.2 105 31.4
CDE07G1712 Ceratophyllum demersum HOM05D003174 ORTHO05D003439 2.6e-07 61.2 155 30.3
Lj3g0014619 Lotus japonicus HOM05D003174 ORTHO05D003439 4.4e-07 60.5 126 30.2
PGR004G2807 Punica granatum HOM05D003174 ORTHO05D003439 5.8e-07 60.1 107 34.6
BcaB04g20191 Brassica carinata HOM05D003174 ORTHO05D003439 7.6e-07 59.7 120 33.3
PSO541G3184 Papaver somniferum HOM05D003174 ORTHO05D003439 7.6e-07 59.7 120 31.7
Sp2g05410 Schrenkiella parvula HOM05D001877 ORTHO05D001886 7.6e-07 59.7 125 31.2
Sopen04g007790 Solanum pennellii HOM05D003174 ORTHO05D003439 7.6e-07 59.7 121 31.4
TPR.G21831 Trifolium pratense HOM05D000319 ORTHO05D003439 7.6e-07 59.7 201 26.4
QL10p045460 Quercus lobata HOM05D003174 ORTHO05D003439 9.9e-07 59.3 120 33.3
Sed0019898 Sechium edule HOM05D003174 ORTHO05D003439 9.9e-07 59.3 118 33.1
CAN.G74.6 Capsicum annuum HOM05D003174 ORTHO05D003439 1.3e-06 58.9 142 31.0
MELO3C017697.2 Cucumis melo HOM05D003174 ORTHO05D003439 1.7e-06 58.5 118 34.7
Solyc04g015710.3 Solanum lycopersicum HOM05D003174 ORTHO05D003439 1.7e-06 58.5 121 31.4
BcaC09g49501 Brassica carinata HOM05D003174 ORTHO05D003439 2.2e-06 58.2 127 30.7
BolC1t03544H Brassica oleracea HOM05D003174 ORTHO05D003439 2.2e-06 58.2 127 30.7
Thhalv10023956m.g Eutrema salsugineum HOM05D001877 ORTHO05D001886 2.2e-06 58.2 115 31.3
Aqoxy4G02973 Aquilegia oxysepala HOM05D003174 ORTHO05D003439 2.9e-06 57.8 99 35.4
Peaxi162Scf00066g01134 Petunia axillaris HOM05D003174 ORTHO05D003439 2.9e-06 57.8 96 31.2
FAN09G4813 Fragaria x ananassa HOM05D003174 ORTHO05D003439 4.9e-06 57.0 105 29.5
TPR.G37089 Trifolium pratense HOM05D003174 ORTHO05D003439 4.9e-06 57.0 201 25.9
unitig_736.g22251 Utricularia gibba HOM05D003174 ORTHO05D003439 4.9e-06 57.0 128 33.6
PGSC0003DMG400027274 Solanum tuberosum HOM05D003174 ORTHO05D003439 6.4e-06 56.6 93 36.6
FAN02G1934 Fragaria x ananassa HOM05D003174 ORTHO05D003439 8.4e-06 56.2 168 28.6
SGA_v2.0_scaffold204G41637 Striga asiatica HOM05D003174 ORTHO05D003439 8.4e-06 56.2 140 30.0


User provided reference genes

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