Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22558 Trifolium pratense HOM05D000192 ORTHO05D000123 1.6e-29 132.1 68 100.0
TPR.G22557 Trifolium pratense HOM05D000192 ORTHO05D000123 4.8e-18 94.0 57 84.2
TPR.G22549 Trifolium pratense HOM05D000192 ORTHO05D000123 1.8e-17 92.0 57 82.5
TPR.G22552 Trifolium pratense HOM05D000192 ORTHO05D000123 1.8e-17 92.0 57 82.5
TPR.G22547 Trifolium pratense HOM05D000192 ORTHO05D000123 5.3e-17 90.5 57 80.7
Lj1g0003264 Lotus japonicus HOM05D000192 ORTHO05D000123 7.0e-17 90.1 57 78.9
Lj1g0022687 Lotus japonicus HOM05D000192 ORTHO05D000123 1.6e-16 89.0 57 75.4
Glyma.11G116200 Glycine max HOM05D000192 ORTHO05D000123 2.2e-15 85.1 63 71.4
Ca_20897_v3 Cicer arietinum L. HOM05D000192 ORTHO05D000123 2.9e-15 84.7 64 71.9
Phvul.011G043700 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 2.9e-15 84.7 64 70.3
Psat7g183960 Pisum sativum HOM05D000192 ORTHO05D000123 2.9e-15 84.7 63 73.0
Medtr4g070530 Medicago truncatula HOM05D000192 ORTHO05D000123 3.8e-15 84.3 63 73.0
Psat7g184000 Pisum sativum HOM05D000192 ORTHO05D000123 3.8e-15 84.3 63 73.0
Glyma.12G042000 Glycine max HOM05D000192 ORTHO05D000123 6.5e-15 83.6 63 71.4
Ca_20898_v3 Cicer arietinum L. HOM05D000192 ORTHO05D000123 1.5e-14 82.4 63 73.0
Ca_20895_v3 Cicer arietinum L. HOM05D000192 ORTHO05D000123 1.9e-14 82.0 63 71.4
Phvul.009G022900 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 1.9e-14 82.0 63 68.3
VMungo1127G0716 Vigna mungo HOM05D000192 ORTHO05D000123 2.5e-14 81.6 64 67.2
Medtr4g070540 Medicago truncatula HOM05D000192 ORTHO05D000123 4.2e-14 80.9 64 67.2
Psat7g183720 Pisum sativum HOM05D000192 ORTHO05D000123 7.2e-14 80.1 63 69.8
Lj3g0019945 Lotus japonicus HOM05D000192 ORTHO05D000123 9.4e-14 79.7 63 68.3
VMungo1309G2635 Vigna mungo HOM05D000192 ORTHO05D000123 9.4e-14 79.7 63 65.1
VMungo1127G1666 Vigna mungo HOM05D000192 ORTHO05D000123 3.0e-12 74.7 63 65.1
Glyma.12G041500 Glycine max HOM05D000192 ORTHO05D000123 1.2e-11 72.8 63 61.9
Psat7g183760 Pisum sativum HOM05D000192 ORTHO05D000123 2.6e-11 71.6 61 67.2
Lj3g0000155 Lotus japonicus HOM05D000192 ORTHO05D000123 4.4e-11 70.9 58 62.1
Glyma.06G011400 Glycine max HOM05D000192 ORTHO05D000123 5.7e-11 70.5 63 61.9
Glyma.12G041700 Glycine max HOM05D000192 ORTHO05D000123 7.5e-11 70.1 58 63.8
arahy.Tifrunner.gnm1.ann1.79QGAF Arachis hypogaea HOM05D000192 ORTHO05D000123 2.2e-10 68.6 64 59.4
Glyma.12G041400 Glycine max HOM05D000192 ORTHO05D000123 1.4e-09 65.9 65 52.3
Ca_20893_v3 Cicer arietinum L. HOM05D000192 ORTHO05D000123 2.4e-09 65.1 58 62.1
Ca_20899_v3 Cicer arietinum L. HOM05D000192 ORTHO05D000123 2.4e-09 65.1 58 62.1
arahy.Tifrunner.gnm1.ann1.V0SS2W Arachis hypogaea HOM05D000192 ORTHO05D000123 5.4e-09 63.9 54 63.0
arahy.Tifrunner.gnm1.ann1.WMI0Y6 Arachis hypogaea HOM05D000192 ORTHO05D000123 5.4e-09 63.9 54 63.0
Glyma.11G115500 Glycine max HOM05D000192 ORTHO05D000123 1.6e-08 62.4 65 52.3
arahy.Tifrunner.gnm1.ann1.5EG7FC Arachis hypogaea HOM05D000192 ORTHO05D000123 2.7e-08 61.6 44 68.2
arahy.Tifrunner.gnm1.ann1.MK8RWT Arachis hypogaea HOM05D000192 ORTHO05D000123 3.5e-08 61.2 63 54.0
CANSAT25G0420 Cannabis sativa HOM05D000192 ORTHO05D000123 7.7e-08 60.1 46 60.9
CANSAT25G1944 Cannabis sativa HOM05D000192 ORTHO05D000123 7.7e-08 60.1 46 60.9
Glyma.06G011600 Glycine max HOM05D000192 ORTHO05D000123 7.7e-08 60.1 64 54.7
Glyma.04G011300 Glycine max HOM05D000192 ORTHO05D000123 1.3e-07 59.3 55 52.7
Glyma.11G115700 Glycine max HOM05D000192 ORTHO05D000123 1.7e-07 58.9 59 55.9
arahy.Tifrunner.gnm1.ann1.R39A5A Arachis hypogaea HOM05D000192 ORTHO05D000123 3.8e-07 57.8 43 58.1
CANSAT25G1437 Cannabis sativa HOM05D000192 ORTHO05D000123 3.8e-07 57.8 47 57.4
Potri.004G182700 Populus trichocarpa HOM05D000192 ORTHO05D000123 6.6e-07 57.0 61 52.5
arahy.Tifrunner.gnm1.ann1.EL9BSJ Arachis hypogaea HOM05D000192 ORTHO05D000123 8.6e-07 56.6 44 56.8
CANSAT25G0224 Cannabis sativa HOM05D000192 ORTHO05D000123 8.6e-07 56.6 46 58.7
CANSAT25G3635 Cannabis sativa HOM05D000192 ORTHO05D000123 8.6e-07 56.6 46 58.7
Glyma.11G115800 Glycine max HOM05D000192 ORTHO05D000123 1.1e-06 56.2 58 55.2
Cpa.g.sc20.175 Carica papaya HOM05D000192 ORTHO05D000123 1.5e-06 55.8 64 46.9
Potri.004G182250 Populus trichocarpa HOM05D000192 ORTHO05D000123 1.5e-06 55.8 66 47.0
CANSAT25G2898 Cannabis sativa HOM05D000192 ORTHO05D000123 1.9e-06 55.5 46 56.5
Glyma.06G011300 Glycine max HOM05D000192 ORTHO05D000123 1.9e-06 55.5 60 50.0
Phvul.009G023000 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 1.9e-06 55.5 61 49.2
RcHm_v2.0_Chr6g0279901 Rosa chinensis HOM05D000192 ORTHO05D000123 1.9e-06 55.5 53 54.7
VMungo1127G0731 Vigna mungo HOM05D000192 ORTHO05D000123 1.9e-06 55.5 58 53.4
FAN15G2798 Fragaria x ananassa HOM05D000192 ORTHO05D000123 2.5e-06 55.1 53 52.8
Potri.009G142600 Populus trichocarpa HOM05D000192 ORTHO05D000123 2.5e-06 55.1 47 53.2
RcHm_v2.0_Chr6g0280071 Rosa chinensis HOM05D000192 ORTHO05D000123 2.5e-06 55.1 53 54.7
Cpa.g.sc320.4 Carica papaya HOM05D000192 ORTHO05D000123 3.3e-06 54.7 46 56.5
Potri.009G142400 Populus trichocarpa HOM05D000192 ORTHO05D000123 3.3e-06 54.7 47 53.2
Cpa.g.c29774.2 Carica papaya HOM05D000192 ORTHO05D000123 4.2e-06 54.3 64 45.3
Cpa.g.sc320.3 Carica papaya HOM05D000192 ORTHO05D000123 4.2e-06 54.3 64 46.9
FvH4_2g16202 Fragaria vesca HOM05D000192 ORTHO05D000123 4.2e-06 54.3 53 54.7
FvH4_2g16205 Fragaria vesca HOM05D000192 ORTHO05D000123 4.2e-06 54.3 53 54.7
FAN24G1194 Fragaria x ananassa HOM05D000192 ORTHO05D000123 4.2e-06 54.3 53 54.7
FAN24G2327 Fragaria x ananassa HOM05D000192 ORTHO05D000123 4.2e-06 54.3 53 54.7
Phvul.009G022800 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 4.2e-06 54.3 60 48.3
Prupe.8G175500 Prunus persica HOM05D000192 ORTHO05D000123 4.2e-06 54.3 39 61.5
VMungo1309G0927 Vigna mungo HOM05D000192 ORTHO05D000123 4.2e-06 54.3 66 47.0
Cpa.g.sc20.172 Carica papaya HOM05D000192 ORTHO05D000123 5.5e-06 53.9 50 50.0
FvH4_2g16203 Fragaria vesca HOM05D000192 ORTHO05D000123 7.2e-06 53.5 53 54.7
Lj3g0024156 Lotus japonicus HOM05D000192 ORTHO05D000123 7.2e-06 53.5 63 49.2
Prupe.8G175000 Prunus persica HOM05D000192 ORTHO05D000123 7.2e-06 53.5 47 57.4
FAN24G0361 Fragaria x ananassa HOM05D000192 ORTHO05D000123 9.5e-06 53.1 52 53.8
MD10G1134300 Malus domestica HOM05D000192 ORTHO05D000123 9.5e-06 53.1 58 50.0


User provided reference genes

Program Settings