Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22535 Trifolium pratense HOM05D000158 ORTHO05D003614 1.5e-110 402.9 209 100.0
TPR.G1709 Trifolium pratense HOM05D000158 ORTHO05D003614 5.7e-102 374.4 209 92.3
TPR.G29552 Trifolium pratense HOM05D000158 ORTHO05D003614 6.3e-101 370.9 209 87.1
TPR.G16485 Trifolium pratense HOM05D000158 ORTHO05D002858 2.4e-100 369.0 209 92.3
TPR.G32580 Trifolium pratense HOM05D000158 ORTHO05D003614 9.7e-94 347.1 196 91.8
TPR.G1733 Trifolium pratense HOM05D000158 ORTHO05D003614 6.9e-39 164.9 96 91.7
TPR.G3920 Trifolium pratense HOM05D000158 ORTHO05D003614 1.7e-37 160.2 206 42.2
TPR.G15890 Trifolium pratense HOM05D000158 ORTHO05D003614 9.3e-36 154.5 203 39.9
TPR.G549 Trifolium pratense HOM05D000158 ORTHO05D003614 2.7e-35 152.9 206 40.8
TPR.G15022 Trifolium pratense HOM05D000158 ORTHO05D003614 1.3e-34 150.6 206 38.8
TPR.G25318 Trifolium pratense HOM05D000158 ORTHO05D003614 1.6e-32 143.7 206 38.3
TPR.G315 Trifolium pratense HOM05D000158 ORTHO05D002858 8.1e-32 141.4 207 37.7
TPR.G29283 Trifolium pratense HOM05D000158 ORTHO05D003614 9.0e-31 137.9 207 36.7
TPR.G950 Trifolium pratense HOM05D000158 ORTHO05D003614 2.2e-29 133.3 208 35.6
TPR.G33025 Trifolium pratense HOM05D000158 ORTHO05D003614 3.8e-29 132.5 207 35.7
TPR.G1870 Trifolium pratense HOM05D000158 ORTHO05D000197 2.3e-26 123.2 208 34.1
arahy.Tifrunner.gnm1.ann1.HZF4LC Arachis hypogaea HOM05D000158 ORTHO05D003614 6.2e-24 115.2 205 30.7
arahy.Tifrunner.gnm1.ann1.85N44V Arachis hypogaea HOM05D000158 ORTHO05D003614 1.8e-23 113.6 200 31.0
arahy.Tifrunner.gnm1.ann1.L36DBH Arachis hypogaea HOM05D000158 ORTHO05D003614 1.8e-23 113.6 205 31.7
arahy.Tifrunner.gnm1.ann1.21K3KG Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-23 112.8 205 31.2
arahy.Tifrunner.gnm1.ann1.7YB513 Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-23 112.8 205 31.2
arahy.Tifrunner.gnm1.ann1.C6YBE7 Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-23 112.8 205 31.2
arahy.Tifrunner.gnm1.ann1.I3DMP8 Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-23 112.8 205 31.2
arahy.Tifrunner.gnm1.ann1.KQR6FG Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-23 112.8 205 31.2
arahy.Tifrunner.gnm1.ann1.LX1T2E Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-23 112.8 205 31.2
arahy.Tifrunner.gnm1.ann1.M3GPWT Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-23 112.8 205 31.2
arahy.Tifrunner.gnm1.ann1.ND4IN6 Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-23 112.8 205 31.2
arahy.Tifrunner.gnm1.ann1.UB3QJP Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-23 112.8 205 31.2
arahy.Tifrunner.gnm1.ann1.39JP8F Arachis hypogaea HOM05D000158 ORTHO05D000197 4.0e-23 112.5 205 31.2
arahy.Tifrunner.gnm1.ann1.BII856 Arachis hypogaea HOM05D000158 ORTHO05D003614 4.0e-23 112.5 205 31.2
arahy.Tifrunner.gnm1.ann1.L8ZWLV Arachis hypogaea HOM05D000158 ORTHO05D003614 4.0e-23 112.5 205 31.2
arahy.Tifrunner.gnm1.ann1.PH6WQ4 Arachis hypogaea HOM05D000158 ORTHO05D003614 4.0e-23 112.5 205 31.2
arahy.Tifrunner.gnm1.ann1.KE59B5 Arachis hypogaea HOM05D000158 ORTHO05D003614 6.9e-23 111.7 205 31.2
arahy.Tifrunner.gnm1.ann1.SF4JEE Arachis hypogaea HOM05D000158 ORTHO05D003614 6.9e-23 111.7 177 32.8
arahy.Tifrunner.gnm1.ann1.8C0UK9 Arachis hypogaea HOM05D000158 ORTHO05D003614 7.6e-22 108.2 170 32.4
TPR.G35583 Trifolium pratense HOM05D000158 ORTHO05D003614 1.0e-21 107.8 168 37.5
arahy.Tifrunner.gnm1.ann1.XB9ITR Arachis hypogaea HOM05D000158 ORTHO05D003614 1.3e-21 107.5 205 30.2
arahy.Tifrunner.gnm1.ann1.CIR6XW Arachis hypogaea HOM05D000158 ORTHO05D003614 2.9e-21 106.3 157 33.8
TPR.G811 Trifolium pratense HOM05D000158 ORTHO05D002858 4.2e-20 102.4 207 32.4
arahy.Tifrunner.gnm1.ann1.PM7TCX Arachis hypogaea HOM05D000158 ORTHO05D003614 2.7e-19 99.8 131 32.8
arahy.Tifrunner.gnm1.ann1.L6BQDJ Arachis hypogaea HOM05D000158 ORTHO05D003614 6.0e-19 98.6 203 28.1
arahy.Tifrunner.gnm1.ann1.3J1G6C Arachis hypogaea HOM05D000158 ORTHO05D003614 3.0e-18 96.3 118 35.6
TPR.G31233 Trifolium pratense HOM05D000002 ORTHO05D000047 1.5e-17 94.0 156 35.9
arahy.Tifrunner.gnm1.ann1.KM4XKA Arachis hypogaea HOM05D000158 ORTHO05D003614 2.5e-17 93.2 158 32.3
arahy.Tifrunner.gnm1.ann1.B5KN1P Arachis hypogaea HOM05D000158 ORTHO05D003614 5.7e-17 92.0 118 35.6
arahy.Tifrunner.gnm1.ann1.27N94R Arachis hypogaea HOM05D000158 ORTHO05D003614 1.3e-16 90.9 189 29.6
arahy.Tifrunner.gnm1.ann1.XHW9M1 Arachis hypogaea HOM05D000158 ORTHO05D003614 1.4e-15 87.4 205 26.8
arahy.Tifrunner.gnm1.ann1.DRRI7H Arachis hypogaea HOM05D000158 ORTHO05D003614 1.0e-13 81.3 166 29.5
arahy.Tifrunner.gnm1.ann1.674B2A Arachis hypogaea HOM05D000158 ORTHO05D003614 1.3e-13 80.9 152 30.9
arahy.Tifrunner.gnm1.ann1.07MBFI Arachis hypogaea HOM05D000158 ORTHO05D003614 1.7e-13 80.5 192 28.1
arahy.Tifrunner.gnm1.ann1.3LDA7I Arachis hypogaea HOM05D000158 ORTHO05D003614 1.7e-13 80.5 166 29.5
arahy.Tifrunner.gnm1.ann1.YM3TT0 Arachis hypogaea HOM05D000158 ORTHO05D003614 2.2e-13 80.1 166 29.5
TPR.G27444 Trifolium pratense HOM05D000158 ORTHO05D002858 2.2e-13 80.1 144 34.7
arahy.Tifrunner.gnm1.ann1.XS500A Arachis hypogaea HOM05D000158 ORTHO05D001651 2.9e-13 79.7 207 25.6
arahy.Tifrunner.gnm1.ann1.C0CXNP Arachis hypogaea HOM05D000158 ORTHO05D001651 3.8e-13 79.3 214 25.7
arahy.Tifrunner.gnm1.ann1.EB82CG Arachis hypogaea HOM05D000158 ORTHO05D001651 3.8e-13 79.3 211 27.0
Gorai.004G105300 Gossypium raimondii HOM05D000158 ORTHO05D001651 3.8e-13 79.3 198 28.8
arahy.Tifrunner.gnm1.ann1.390B12 Arachis hypogaea HOM05D000158 ORTHO05D000197 5.0e-13 79.0 214 26.2
arahy.Tifrunner.gnm1.ann1.70M392 Arachis hypogaea HOM05D000158 ORTHO05D001651 5.0e-13 79.0 214 26.2
arahy.Tifrunner.gnm1.ann1.R36SB9 Arachis hypogaea HOM05D000158 ORTHO05D003614 5.0e-13 79.0 166 28.9
arahy.Tifrunner.gnm1.ann1.TR8294 Arachis hypogaea HOM05D000158 ORTHO05D003614 5.0e-13 79.0 108 33.3
TPR.G27673 Trifolium pratense HOM05D000158 ORTHO05D003614 5.0e-13 79.0 86 43.0
TPR.G35103 Trifolium pratense HOM05D000158 ORTHO05D003614 5.0e-13 79.0 106 39.6
arahy.Tifrunner.gnm1.ann1.36PX7W Arachis hypogaea HOM05D000158 ORTHO05D001651 8.4e-13 78.2 214 25.2
arahy.Tifrunner.gnm1.ann1.3MFK89 Arachis hypogaea HOM05D000158 ORTHO05D003614 8.4e-13 78.2 141 30.5
arahy.Tifrunner.gnm1.ann1.XF3T5B Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-12 77.8 214 25.7
arahy.Tifrunner.gnm1.ann1.JQ4SFM Arachis hypogaea HOM05D000158 ORTHO05D001651 1.4e-12 77.4 211 26.1
arahy.Tifrunner.gnm1.ann1.VCIQ09 Arachis hypogaea HOM05D000158 ORTHO05D001651 1.4e-12 77.4 211 26.1
Gorai.001G115800 Gossypium raimondii HOM05D000158 ORTHO05D000197 1.9e-12 77.0 174 29.9
arahy.Tifrunner.gnm1.ann1.FX7YCE Arachis hypogaea HOM05D000158 ORTHO05D000197 2.5e-12 76.6 211 25.6
arahy.Tifrunner.gnm1.ann1.QI14Z6 Arachis hypogaea HOM05D000158 ORTHO05D001651 2.5e-12 76.6 211 25.6
arahy.Tifrunner.gnm1.ann1.580H8T Arachis hypogaea HOM05D000158 ORTHO05D001651 3.2e-12 76.3 214 26.2
arahy.Tifrunner.gnm1.ann1.7AD5C9 Arachis hypogaea HOM05D000158 ORTHO05D001651 3.2e-12 76.3 211 25.6
arahy.Tifrunner.gnm1.ann1.88FLLY Arachis hypogaea HOM05D000158 ORTHO05D003614 3.2e-12 76.3 205 25.4
arahy.Tifrunner.gnm1.ann1.A5Q8GJ Arachis hypogaea HOM05D000158 ORTHO05D003614 3.2e-12 76.3 197 26.4
arahy.Tifrunner.gnm1.ann1.BCFP52 Arachis hypogaea HOM05D000158 ORTHO05D000197 3.2e-12 76.3 214 25.2
arahy.Tifrunner.gnm1.ann1.Q77YYM Arachis hypogaea HOM05D000158 ORTHO05D001651 3.2e-12 76.3 214 25.2
arahy.Tifrunner.gnm1.ann1.57V53W Arachis hypogaea HOM05D000158 ORTHO05D001651 4.2e-12 75.9 214 25.2
arahy.Tifrunner.gnm1.ann1.JB5G6S Arachis hypogaea HOM05D000158 ORTHO05D000197 5.5e-12 75.5 211 25.1
Thhalv10005609m.g Eutrema salsugineum HOM05D000158 ORTHO05D003614 7.1e-12 75.1 134 30.6
Sed0021173 Sechium edule HOM05D000158 ORTHO05D003614 9.3e-12 74.7 174 32.2
arahy.Tifrunner.gnm1.ann1.3FDV0G Arachis hypogaea HOM05D000158 ORTHO05D003614 1.2e-11 74.3 197 26.9
arahy.Tifrunner.gnm1.ann1.NZ73MH Arachis hypogaea HOM05D000158 ORTHO05D000197 1.2e-11 74.3 211 25.1
arahy.Tifrunner.gnm1.ann1.RY0Z86 Arachis hypogaea HOM05D000158 ORTHO05D001651 1.2e-11 74.3 214 25.2
Gorai.003G148300 Gossypium raimondii HOM05D000158 ORTHO05D001651 1.2e-11 74.3 208 30.3
arahy.Tifrunner.gnm1.ann1.5R798I Arachis hypogaea HOM05D000158 ORTHO05D001651 2.7e-11 73.2 195 25.6
arahy.Tifrunner.gnm1.ann1.B8TUXN Arachis hypogaea HOM05D000158 ORTHO05D001651 2.7e-11 73.2 214 25.2
arahy.Tifrunner.gnm1.ann1.M8Q16P Arachis hypogaea HOM05D000158 ORTHO05D003614 2.7e-11 73.2 136 27.9
Gorai.011G206800 Gossypium raimondii HOM05D000158 ORTHO05D001651 2.7e-11 73.2 198 27.3
arahy.Tifrunner.gnm1.ann1.5GP89W Arachis hypogaea HOM05D000158 ORTHO05D003614 3.5e-11 72.8 197 25.4
arahy.Tifrunner.gnm1.ann1.IZN6QE Arachis hypogaea HOM05D000158 ORTHO05D001651 3.5e-11 72.8 199 25.1
arahy.Tifrunner.gnm1.ann1.WK2R97 Arachis hypogaea HOM05D000158 ORTHO05D003614 6.1e-11 72.0 103 33.0
arahy.Tifrunner.gnm1.ann1.UD6UQ7 Arachis hypogaea HOM05D000158 ORTHO05D001651 7.9e-11 71.6 178 25.8
arahy.Tifrunner.gnm1.ann1.0KMJ0W Arachis hypogaea HOM05D000158 ORTHO05D003614 1.0e-10 71.2 87 31.0
arahy.Tifrunner.gnm1.ann1.HJH8XH Arachis hypogaea HOM05D000158 ORTHO05D003614 1.0e-10 71.2 86 36.0
arahy.Tifrunner.gnm1.ann1.NZ0BB7 Arachis hypogaea HOM05D000158 ORTHO05D001651 1.3e-10 70.9 211 25.6
arahy.Tifrunner.gnm1.ann1.U6FK4J Arachis hypogaea HOM05D000158 ORTHO05D003614 1.3e-10 70.9 86 36.0
Gorai.008G070700 Gossypium raimondii HOM05D000158 ORTHO05D001651 1.8e-10 70.5 187 29.9
arahy.Tifrunner.gnm1.ann1.E4NK8R Arachis hypogaea HOM05D000158 ORTHO05D001651 3.0e-10 69.7 214 24.8
Gorai.003G092000 Gossypium raimondii HOM05D000158 ORTHO05D001651 3.0e-10 69.7 204 29.9
Atru.chr12.2446 Acer truncatum HOM05D000158 ORTHO05D002858 3.9e-10 69.3 213 28.6
arahy.Tifrunner.gnm1.ann1.8778WX Arachis hypogaea HOM05D000158 ORTHO05D001651 3.9e-10 69.3 175 25.1
Manes.07G082282 Manihot esculenta HOM05D000158 ORTHO05D001651 3.9e-10 69.3 191 27.7
arahy.Tifrunner.gnm1.ann1.KN9JMY Arachis hypogaea HOM05D000158 ORTHO05D003614 8.7e-10 68.2 132 30.3
arahy.Tifrunner.gnm1.ann1.B6618T Arachis hypogaea HOM05D000158 ORTHO05D001651 1.1e-09 67.8 175 25.1
arahy.Tifrunner.gnm1.ann1.N9660C Arachis hypogaea HOM05D000158 ORTHO05D000197 1.9e-09 67.0 200 24.0
Gorai.003G115200 Gossypium raimondii HOM05D000158 ORTHO05D001651 2.5e-09 66.6 208 25.0
arahy.Tifrunner.gnm1.ann1.36QDDH Arachis hypogaea HOM05D000158 ORTHO05D003614 4.3e-09 65.9 81 37.0
Gorai.004G080800 Gossypium raimondii HOM05D000158 ORTHO05D001651 4.3e-09 65.9 202 27.7
arahy.Tifrunner.gnm1.ann1.QNS4LJ Arachis hypogaea HOM05D000158 ORTHO05D001651 5.7e-09 65.5 199 25.6
BolC9t56030H Brassica oleracea HOM05D009948 ORTHO05D003614 5.7e-09 65.5 129 29.5
Gorai.006G078300 Gossypium raimondii HOM05D000158 ORTHO05D001651 5.7e-09 65.5 208 28.4
AL3G45100 Arabidopsis lyrata HOM05D009948 ORTHO05D003614 7.4e-09 65.1 115 33.9
arahy.Tifrunner.gnm1.ann1.0K7AXS Arachis hypogaea HOM05D000158 ORTHO05D003614 7.4e-09 65.1 131 30.5
arahy.Tifrunner.gnm1.ann1.QR4X03 Arachis hypogaea HOM05D000158 ORTHO05D001651 7.4e-09 65.1 211 24.6
arahy.Tifrunner.gnm1.ann1.U9Z8G8 Arachis hypogaea HOM05D000158 ORTHO05D003614 1.3e-08 64.3 132 30.3
Gorai.002G201400 Gossypium raimondii HOM05D000158 ORTHO05D001651 1.3e-08 64.3 191 29.8
C07p10000 Brassica napus HOM05D009948 ORTHO05D001651 1.6e-08 63.9 134 28.4
BNapus_Darmor_BZH_scaffold_82p00130 Brassica napus HOM05D009948 ORTHO05D001651 2.2e-08 63.5 144 28.5
BcaC01g02199 Brassica carinata HOM05D009948 ORTHO05D001651 2.8e-08 63.2 153 27.5
arahy.Tifrunner.gnm1.ann1.4V920P Arachis hypogaea HOM05D000158 ORTHO05D003614 3.7e-08 62.8 73 38.4
CiPaw.11G094800 Carya illinoinensis HOM05D000158 ORTHO05D001651 3.7e-08 62.8 191 28.8
arahy.Tifrunner.gnm1.ann1.HK2C6P Arachis hypogaea HOM05D000158 ORTHO05D003614 4.8e-08 62.4 131 29.8
Lj4g0023678 Lotus japonicus HOM05D000158 ORTHO05D003614 4.8e-08 62.4 85 34.1
arahy.Tifrunner.gnm1.ann1.2GR0NI Arachis hypogaea HOM05D000158 ORTHO05D003614 8.2e-08 61.6 129 30.2
arahy.Tifrunner.gnm1.ann1.H67SMZ Arachis hypogaea HOM05D000158 ORTHO05D003614 8.2e-08 61.6 129 30.2
arahy.Tifrunner.gnm1.ann1.J82SP9 Arachis hypogaea HOM05D000158 ORTHO05D003614 8.2e-08 61.6 169 27.2
arahy.Tifrunner.gnm1.ann1.ELD0WK Arachis hypogaea HOM05D000158 ORTHO05D003614 1.1e-07 61.2 131 29.8
BolC3t20475H Brassica oleracea HOM05D009948 ORTHO05D001651 1.4e-07 60.8 134 27.6
CiPaw.12G002500 Carya illinoinensis HOM05D000158 ORTHO05D001651 1.4e-07 60.8 190 27.9
arahy.Tifrunner.gnm1.ann1.6R7QKP Arachis hypogaea HOM05D000158 ORTHO05D003614 1.8e-07 60.5 131 29.0
Lj2g0005800 Lotus japonicus HOM05D000158 ORTHO05D003614 1.8e-07 60.5 82 34.1
arahy.Tifrunner.gnm1.ann1.5VKS5W Arachis hypogaea HOM05D000158 ORTHO05D003614 2.4e-07 60.1 78 34.6
arahy.Tifrunner.gnm1.ann1.KW0KAK Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-07 59.7 115 30.4
arahy.Tifrunner.gnm1.ann1.R9SFHJ Arachis hypogaea HOM05D000158 ORTHO05D001651 3.1e-07 59.7 209 23.4
arahy.Tifrunner.gnm1.ann1.ZJ41UK Arachis hypogaea HOM05D000158 ORTHO05D003614 3.1e-07 59.7 154 27.3
CiPaw.04G053800 Carya illinoinensis HOM05D000158 ORTHO05D000197 3.1e-07 59.7 191 28.3
arahy.Tifrunner.gnm1.ann1.8I9LCZ Arachis hypogaea HOM05D000158 ORTHO05D003614 4.1e-07 59.3 129 29.5
arahy.Tifrunner.gnm1.ann1.C857HD Arachis hypogaea HOM05D000158 ORTHO05D001651 4.1e-07 59.3 155 27.1
CiPaw.11G040600 Carya illinoinensis HOM05D000158 ORTHO05D001651 4.1e-07 59.3 191 28.3
arahy.Tifrunner.gnm1.ann1.4I6NT8 Arachis hypogaea HOM05D000158 ORTHO05D003614 5.3e-07 58.9 102 31.4
arahy.Tifrunner.gnm1.ann1.IHP7J9 Arachis hypogaea HOM05D000158 ORTHO05D003614 5.3e-07 58.9 86 31.4
Gorai.010G126200 Gossypium raimondii HOM05D000158 ORTHO05D001651 5.3e-07 58.9 185 28.1
arahy.Tifrunner.gnm1.ann1.YC718Y Arachis hypogaea HOM05D000158 ORTHO05D003614 6.9e-07 58.5 63 38.1
CiPaw.01G068100 Carya illinoinensis HOM05D000158 ORTHO05D001651 1.2e-06 57.8 191 27.7
arahy.Tifrunner.gnm1.ann1.1L1P0P Arachis hypogaea HOM05D000158 ORTHO05D003614 2.6e-06 56.6 129 30.2
Manes.02G199850 Manihot esculenta HOM05D000158 ORTHO05D001651 2.6e-06 56.6 181 27.1
arahy.Tifrunner.gnm1.ann1.EZ37SE Arachis hypogaea HOM05D000158 ORTHO05D003614 5.9e-06 55.5 61 39.3
arahy.Tifrunner.gnm1.ann1.F4E2J3 Arachis hypogaea HOM05D000158 ORTHO05D003614 7.7e-06 55.1 82 35.4
Thhalv10012301m.g Eutrema salsugineum HOM05D009948 ORTHO05D001651 7.7e-06 55.1 143 25.9
arahy.Tifrunner.gnm1.ann1.5LCN4U Arachis hypogaea HOM05D000158 ORTHO05D003614 1.0e-05 54.7 78 30.8


User provided reference genes

Program Settings