Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22526 Trifolium pratense HOM05D000013 ORTHO05D030557 3.7e-24 114.0 56 100.0
TPR.G10909 Trifolium pratense HOM05D000013 ORTHO05D030557 7.0e-23 109.8 56 94.6
Medtr4g091690 Medicago truncatula HOM05D000013 ORTHO05D000011 2.9e-21 104.4 56 91.1
TPR.G15377 Trifolium pratense HOM05D000013 ORTHO05D030557 3.3e-20 100.9 56 85.7
TPR.G18353 Trifolium pratense HOM05D000013 ORTHO05D000011 9.5e-20 99.4 57 87.7
TPR.G15383 Trifolium pratense HOM05D000013 ORTHO05D006595 2.8e-19 97.8 56 85.7
Psat7g107160 Pisum sativum HOM05D000013 ORTHO05D000011 6.1e-19 96.7 56 87.5
arahy.Tifrunner.gnm1.ann1.WE5WNX Arachis hypogaea HOM05D000013 ORTHO05D000011 4.0e-18 94.0 56 78.6
TPR.G40226 Trifolium pratense HOM05D000013 ORTHO05D000011 4.4e-17 90.5 44 95.5
Medtr4g091760 Medicago truncatula HOM05D000013 ORTHO05D000011 5.8e-17 90.1 56 78.6
Medtr4g091840 Medicago truncatula HOM05D000013 ORTHO05D000011 7.5e-17 89.7 56 80.4
Medtr4g091730 Medicago truncatula HOM05D000013 ORTHO05D000011 1.3e-16 89.0 56 76.8
Glyma.07G188600 Glycine max HOM05D000013 ORTHO05D006595 4.1e-15 84.0 56 76.8
Medtr4g091680 Medicago truncatula HOM05D000013 ORTHO05D000011 7.0e-15 83.2 56 75.0
Psat7g107200 Pisum sativum HOM05D000013 ORTHO05D000011 1.2e-14 82.4 56 78.6
Medtr4g091850 Medicago truncatula HOM05D000013 ORTHO05D000011 1.6e-14 82.0 56 76.8
Lj4g0004134 Lotus japonicus HOM05D000013 ORTHO05D000011 4.6e-14 80.5 56 76.8
VMungo0251G0113 Vigna mungo HOM05D000013 ORTHO05D000011 6.0e-14 80.1 56 71.4
Phvul.002G220000 Phaseolus vulgaris HOM05D000013 ORTHO05D000011 7.8e-14 79.7 56 71.4
Glyma.08G060951 Glycine max HOM05D000013 ORTHO05D006595 1.0e-13 79.3 56 75.0
VMungo0251G0483 Vigna mungo HOM05D000013 ORTHO05D000011 1.4e-10 68.9 56 69.6
Psat7g107040 Pisum sativum HOM05D000013 ORTHO05D000011 6.8e-10 66.6 40 77.5
CSS0028244 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 2.9e-08 61.2 56 57.1
CSS0012046 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 8.3e-08 59.7 56 57.1
CSS0017397 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 8.3e-08 59.7 56 57.1
arahy.Tifrunner.gnm1.ann1.98Q0CB Arachis hypogaea HOM05D000013 ORTHO05D000011 3.2e-07 57.8 59 50.8
CSS0027991 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 3.2e-07 57.8 56 55.4
QL05p078864 Quercus lobata HOM05D000013 ORTHO05D000011 3.2e-07 57.8 55 50.9
Rhsim13G0164500 Rhododendron simsii HOM05D000013 ORTHO05D000011 9.2e-07 56.2 58 50.0
CSS0008389 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 1.2e-06 55.8 56 55.4
Rhsim07G0195700 Rhododendron simsii HOM05D000022 ORTHO05D000306 1.2e-06 55.8 58 48.3
FvH4_3g03310 Fragaria vesca HOM05D000013 ORTHO05D000011 1.6e-06 55.5 56 57.1
QL09p047636 Quercus lobata HOM05D000013 ORTHO05D000011 1.6e-06 55.5 55 49.1
Rhsim13G0164100 Rhododendron simsii HOM05D000013 ORTHO05D000011 1.6e-06 55.5 58 51.7
FAN16G3050 Fragaria x ananassa HOM05D000013 ORTHO05D000011 2.1e-06 55.1 56 57.1
Oeu058163.1 Olea europaea HOM05D000013 ORTHO05D000011 2.1e-06 55.1 57 54.4
Rhsim07G0197300 Rhododendron simsii HOM05D000022 ORTHO05D000306 2.1e-06 55.1 58 48.3
QL05p078297 Quercus lobata HOM05D000013 ORTHO05D000011 2.7e-06 54.7 52 50.0
QL09p047651 Quercus lobata HOM05D000013 ORTHO05D000011 2.7e-06 54.7 55 49.1
vmacro03749 Vaccinium macrocarpon HOM05D000013 ORTHO05D000011 2.7e-06 54.7 58 50.0
QL09p046811 Quercus lobata HOM05D000013 ORTHO05D000011 3.5e-06 54.3 55 45.5
CANSAT56G3764 Cannabis sativa HOM05D000013 ORTHO05D000011 4.6e-06 53.9 61 52.5
Medtr4g091820 Medicago truncatula HOM05D000013 ORTHO05D000011 4.6e-06 53.9 27 81.5
Prupe.4G031700 Prunus persica HOM05D000013 ORTHO05D000011 4.6e-06 53.9 56 44.6
RhsimUnG0078900 Rhododendron simsii HOM05D000022 ORTHO05D030539 4.6e-06 53.9 58 50.0
MD10G1308000 Malus domestica HOM05D000013 ORTHO05D000011 6.0e-06 53.5 56 53.6
QL06p043587 Quercus lobata HOM05D000013 ORTHO05D000011 6.0e-06 53.5 55 47.3
QL05p079109 Quercus lobata HOM05D000013 ORTHO05D000011 7.8e-06 53.1 57 52.6
RcHm_v2.0_Chr5g0005051 Rosa chinensis HOM05D000013 ORTHO05D000011 7.8e-06 53.1 56 53.6


User provided reference genes

Program Settings