Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22508 Trifolium pratense HOM05D004406 ORTHO05D005660 2.3e-60 235.3 118 100.0
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 5.6e-54 214.2 118 92.4
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 2.9e-50 201.8 118 89.0
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 1.2e-48 196.4 110 90.0
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 2.0e-48 195.7 118 87.3
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 1.1e-46 189.9 118 83.9
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 3.3e-46 188.3 118 83.1
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 5.6e-46 187.6 118 83.1
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 5.6e-46 187.6 102 91.2
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 7.3e-46 187.2 118 81.4
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 9.5e-46 186.8 112 83.9
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 2.3e-44 182.2 118 76.3
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 8.9e-44 180.3 107 82.2
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 1.2e-43 179.9 118 77.1
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 7.5e-43 177.2 107 80.4
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 1.3e-42 176.4 118 76.3
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 2.2e-42 175.6 119 73.9
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 2.9e-42 175.3 106 80.2
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 6.4e-42 174.1 118 74.6
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 6.4e-42 174.1 109 77.1
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 6.4e-42 174.1 117 73.5
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 1.1e-41 173.3 109 75.2
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 4.1e-41 171.4 116 72.4
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.2e-40 169.9 116 74.1
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 1.6e-40 169.5 113 72.6
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 2.1e-40 169.1 118 71.2
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 2.7e-40 168.7 118 73.7
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 4.6e-40 167.9 107 74.8
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 6.0e-40 167.5 107 75.7
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 2.3e-39 165.6 118 70.3
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 2.3e-39 165.6 113 72.6
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 2.3e-39 165.6 112 74.1
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 5.1e-39 164.5 118 71.2
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 6.6e-39 164.1 118 71.2
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 6.6e-39 164.1 107 72.9
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 6.6e-39 164.1 107 72.0
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 8.6e-39 163.7 107 75.7
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 1.1e-38 163.3 107 72.0
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 1.1e-38 163.3 106 74.5
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 3.3e-38 161.8 110 70.0
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 4.3e-38 161.4 106 73.6
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 4.3e-38 161.4 106 72.6
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 4.3e-38 161.4 106 72.6
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 4.3e-38 161.4 107 70.1
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 4.3e-38 161.4 107 72.0
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 5.6e-38 161.0 106 73.6
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 7.3e-38 160.6 112 68.8
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 1.2e-37 159.8 118 66.1
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 2.8e-37 158.7 107 73.8
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 4.7e-37 157.9 106 75.5
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 4.7e-37 157.9 110 70.0
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 6.2e-37 157.5 107 72.9
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 8.1e-37 157.1 110 71.8
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 1.1e-36 156.8 107 71.0
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.1e-36 156.8 106 70.8
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 1.8e-36 156.0 107 72.0
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 1.8e-36 156.0 107 70.1
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 1.8e-36 156.0 118 65.3
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 2.3e-36 155.6 107 71.0
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 2.3e-36 155.6 107 71.0
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 2.3e-36 155.6 118 66.1
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 2.3e-36 155.6 118 66.1
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 3.1e-36 155.2 104 71.2
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 3.1e-36 155.2 118 65.3
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 3.1e-36 155.2 118 66.1
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 1.5e-35 152.9 107 71.0
SHI18054 Sapria himalayana HOM05D004406 ORTHO05D005660 1.5e-35 152.9 106 69.8
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 3.4e-35 151.8 107 69.2
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 9.9e-35 150.2 107 72.9
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 2.2e-34 149.1 107 72.0
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 2.2e-34 149.1 112 65.2
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 2.9e-34 148.7 107 71.0
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 3.8e-34 148.3 107 72.0
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 8.4e-34 147.1 107 71.0
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 8.4e-34 147.1 107 71.0
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 8.4e-34 147.1 108 70.4
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 8.4e-34 147.1 107 71.0
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.1e-33 146.7 113 62.8
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 1.1e-33 146.7 108 69.4
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 1.1e-33 146.7 108 69.4
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 1.4e-33 146.4 107 69.2
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 1.9e-33 146.0 108 70.4
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 1.9e-33 146.0 107 71.0
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 1.9e-33 146.0 102 71.6
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 2.4e-33 145.6 107 70.1
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 4.1e-33 144.8 107 71.0
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 4.1e-33 144.8 108 66.7
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 5.4e-33 144.4 113 66.4
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 7.1e-33 144.1 113 66.4
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 9.2e-33 143.7 117 64.1
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 2.1e-32 142.5 110 66.4
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 2.1e-32 142.5 107 68.2
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 6.0e-32 141.0 106 68.9
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 7.8e-32 140.6 106 69.8
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 1.0e-31 140.2 108 66.7
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 3.9e-31 138.3 107 67.3
Lj3g0015683 Lotus japonicus HOM05D004406 ORTHO05D036510 6.6e-31 137.5 78 85.9
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 8.6e-31 137.1 127 58.3
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 3.3e-30 135.2 105 65.7
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 1.2e-29 133.3 106 64.2
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 3.6e-29 131.7 110 64.5
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 4.7e-29 131.3 88 70.5
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 3.1e-28 128.6 106 61.3
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 1.5e-27 126.3 106 60.4
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 2.0e-27 125.9 105 64.8
Oeu044427.1 Olea europaea HOM05D004406 ORTHO05D005660 4.4e-27 124.8 180 42.8
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 1.4e-25 119.8 106 60.4
vmacro15158 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 9.3e-25 117.1 78 70.5
vmacro12019 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 1.2e-24 116.7 83 67.5
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 3.5e-24 115.2 103 58.3
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 7.8e-24 114.0 107 58.9
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 1.9e-22 109.4 105 57.1
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 1.6e-21 106.3 98 55.1
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 9.0e-20 100.5 107 51.4
SalBow5G0012 Salvia bowleyana HOM05D004406 ORTHO05D005660 2.9e-18 95.5 163 42.3
Dinv13306 Davidia involucrata HOM05D004406 ORTHO05D005660 4.9e-18 94.7 66 69.7
SMO353G0172 Selaginella moellendorffii HOM05D004406 ORTHO05D005660 1.9e-17 92.8 108 49.1
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 5.4e-17 91.3 78 64.1
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 9.6e-14 80.5 64 70.3
C02p50710 Brassica napus HOM05D004406 ORTHO05D005660 6.2e-13 77.8 62 61.3
SGA_v2.0_scaffold181G39778 Striga asiatica HOM05D004406 ORTHO05D005660 1.1e-12 77.0 97 49.5
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 1.5e-11 73.2 108 44.4
Aqoxy113s002 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 3.4e-11 72.0 48 68.8
Glyma.08G170200 Glycine max HOM05D004406 ORTHO05D005660 3.4e-11 72.0 48 79.2
PSO017G0585 Papaver somniferum HOM05D004406 ORTHO05D005660 4.5e-11 71.6 66 57.6
SEGI_01378 Sequoiadendron giganteum HOM05D000678 ORTHO05D001709 1.4e-09 66.6 45 75.6
SEGI_33737 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 7.1e-09 64.3 66 48.5
arahy.Tifrunner.gnm1.ann1.FEA8VP Arachis hypogaea HOM05D004603 ORTHO05D005244 9.3e-09 63.9 38 76.3
DCAR_010031 Daucus carota HOM05D000781 ORTHO05D012367 4.6e-08 61.6 47 68.1
Haze_26719 Corylus avellana HOM05D004406 ORTHO05D005660 1.0e-07 60.5 102 38.2
vmacro12020 Vaccinium macrocarpon HOM05D004406 ORTHO05D036510 1.0e-07 60.5 49 63.3
vmacro15157 Vaccinium macrocarpon HOM05D004406 ORTHO05D036510 2.3e-07 59.3 44 65.9
PRCOL_00002569 Prasinoderma coloniale HOM05D004406 ORTHO05D005660 8.7e-07 57.4 37 64.9


User provided reference genes

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