Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 2.9e-85 318.5 163 100.0
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 2.1e-80 302.4 154 98.1
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 1.3e-74 283.1 154 90.3
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 5.1e-74 281.2 154 90.3
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 4.8e-72 274.6 154 86.4
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 3.8e-69 265.0 154 82.5
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 2.5e-68 262.3 152 82.2
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 1.5e-65 253.1 151 79.5
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 2.0e-65 252.7 164 76.2
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 2.5e-65 252.3 150 80.7
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 2.5e-65 252.3 150 78.0
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 3.3e-65 251.9 154 79.9
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 5.7e-65 251.1 154 79.9
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 9.7e-65 250.4 156 79.5
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 9.7e-65 250.4 154 77.3
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 1.7e-64 249.6 149 79.9
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 2.8e-64 248.8 152 78.9
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 3.7e-64 248.4 150 77.3
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 4.8e-64 248.1 151 76.8
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 4.8e-64 248.1 150 75.3
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 6.3e-64 247.7 149 80.5
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 8.2e-64 247.3 158 75.3
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 1.1e-63 246.9 150 79.3
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 1.1e-63 246.9 150 74.7
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 1.4e-63 246.5 160 73.8
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 1.4e-63 246.5 152 74.3
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 1.4e-63 246.5 152 77.0
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 1.8e-63 246.1 150 78.0
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 2.4e-63 245.7 152 75.7
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 4.1e-63 245.0 151 76.2
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 5.3e-63 244.6 151 75.5
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 5.3e-63 244.6 152 77.0
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 1.2e-62 243.4 150 74.0
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 2.0e-62 242.7 150 75.3
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 3.4e-62 241.9 152 74.3
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 3.4e-62 241.9 157 72.0
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 5.9e-62 241.1 158 72.8
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 7.7e-62 240.7 158 71.5
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 1.3e-61 240.0 149 74.5
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 1.7e-61 239.6 160 71.9
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 2.2e-61 239.2 149 75.2
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 2.2e-61 239.2 156 75.0
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 3.8e-61 238.4 158 72.2
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 5.0e-61 238.0 148 75.7
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 5.0e-61 238.0 149 76.5
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 5.0e-61 238.0 149 76.5
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 5.0e-61 238.0 154 72.7
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 6.5e-61 237.7 158 71.5
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 6.5e-61 237.7 150 72.0
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 8.5e-61 237.3 143 77.6
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 8.5e-61 237.3 152 73.0
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 8.5e-61 237.3 152 73.0
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 1.1e-60 236.9 152 70.4
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 1.1e-60 236.9 152 74.3
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 1.1e-60 236.9 154 72.1
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 1.4e-60 236.5 143 78.3
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 1.4e-60 236.5 150 74.7
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 1.9e-60 236.1 153 71.2
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 1.9e-60 236.1 149 73.8
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 2.5e-60 235.7 152 72.4
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 2.5e-60 235.7 157 73.2
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 4.2e-60 235.0 154 71.4
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 5.5e-60 234.6 152 73.0
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 5.5e-60 234.6 150 71.3
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 9.4e-60 233.8 154 71.4
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 1.6e-59 233.0 155 70.3
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 3.6e-59 231.9 153 69.9
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 4.7e-59 231.5 154 70.8
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 4.7e-59 231.5 147 74.1
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 6.1e-59 231.1 154 70.8
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 6.1e-59 231.1 148 71.6
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 7.9e-59 230.7 153 70.6
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 1.4e-58 229.9 163 66.9
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 3.0e-58 228.8 149 72.5
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 6.7e-58 227.6 134 79.9
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 1.5e-57 226.5 150 68.7
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 2.0e-57 226.1 143 74.1
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 2.6e-57 225.7 149 71.1
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 3.3e-57 225.3 144 73.6
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 4.4e-57 224.9 152 67.8
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 4.4e-57 224.9 152 67.8
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 3.7e-56 221.9 163 64.4
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 3.7e-56 221.9 152 69.7
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 8.2e-56 220.7 143 73.4
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 8.2e-56 220.7 150 70.0
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 1.1e-55 220.3 150 73.3
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 2.4e-55 219.2 143 72.7
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 2.4e-55 219.2 148 70.3
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 2.4e-55 219.2 155 63.9
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 4.1e-55 218.4 150 68.7
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 5.3e-55 218.0 141 72.3
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 5.3e-55 218.0 160 63.8
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 1.0e-53 213.8 143 66.4
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 5.0e-53 211.5 141 69.5
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 6.5e-53 211.1 141 69.5
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 8.5e-53 210.7 163 63.8
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 8.5e-53 210.7 148 66.9
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 8.5e-53 210.7 143 70.6
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 2.5e-52 209.1 148 65.5
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 4.2e-52 208.4 141 67.4
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 5.5e-52 208.0 141 67.4
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 7.2e-52 207.6 148 64.9
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 1.2e-51 206.8 152 63.8
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 1.6e-51 206.5 148 65.5
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 1.6e-51 206.5 148 65.5
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 3.6e-51 205.3 153 63.4
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 8.0e-51 204.1 141 66.7
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 1.8e-50 203.0 147 65.3
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 2.3e-50 202.6 148 63.5
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 3.0e-50 202.2 146 64.4
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 1.2e-46 190.3 121 74.4
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 3.5e-46 188.7 145 60.0
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 1.3e-45 186.8 141 64.5
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 1.8e-42 176.4 129 68.2
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 6.8e-42 174.5 130 66.2
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 5.7e-41 171.4 99 79.8
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 1.7e-40 169.9 131 60.3
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 2.4e-39 166.0 141 55.3
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 3.5e-38 162.2 143 56.6
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 3.5e-38 162.2 143 54.5
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 6.5e-37 157.9 137 60.6
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 8.5e-37 157.5 143 53.1
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 8.5e-37 157.5 141 51.1
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 1.2e-35 153.7 112 69.6
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 4.1e-31 138.7 100 66.0
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 9.1e-31 137.5 145 49.7
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 2.3e-29 132.9 143 49.0
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 3.8e-29 132.1 145 48.3
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 3.8e-29 132.1 97 66.0
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 2.6e-25 119.4 152 46.1
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 3.4e-25 119.0 150 44.0
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 2.0e-22 109.8 90 58.9
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 7.8e-22 107.8 85 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 6.6e-21 104.8 84 57.1


User provided reference genes

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