Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22274 Trifolium pratense HOM05D003216 ORTHO05D004526 2.2e-114 415.6 203 100.0
TPR.G29741 Trifolium pratense HOM05D000593 ORTHO05D002268 9.3e-49 197.6 375 34.4
TPR.G3927 Trifolium pratense HOM05D003216 ORTHO05D002268 1.6e-40 170.2 89 88.8
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 5.3e-28 128.6 212 34.9
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 3.2e-25 119.4 92 56.5
TPR.G37709 Trifolium pratense HOM05D003216 ORTHO05D000562 6.1e-24 115.2 128 50.0
TPR.G19405 Trifolium pratense HOM05D003216 ORTHO05D002268 2.3e-23 113.2 75 65.3
TPR.G8671 Trifolium pratense HOM05D000593 ORTHO05D000562 3.9e-23 112.5 55 92.7
TPR.G28618 Trifolium pratense HOM05D000593 ORTHO05D000562 9.7e-22 107.8 57 86.0
TPR.G21191 Trifolium pratense HOM05D003216 ORTHO05D002268 1.4e-17 94.0 61 63.9
Ca_02614_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.4e-12 76.6 148 31.8
Medtr3g467680 Medicago truncatula HOM05D003216 ORTHO05D002268 6.9e-12 75.1 87 40.2
LjContig00564g0012597 Lotus japonicus HOM05D001013 ORTHO05D001703 9.1e-12 74.7 59 59.3
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 9.1e-12 74.7 87 43.7
CSS0010192 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.2e-11 74.3 272 25.4
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-11 73.6 87 42.5
Medtr1g012760 Medicago truncatula HOM05D000593 ORTHO05D004526 4.5e-11 72.4 203 29.6
Medtr2g061890 Medicago truncatula HOM05D003216 ORTHO05D002268 4.5e-11 72.4 87 40.2
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 1.0e-10 71.2 87 42.5
CsaV3_6G052370 Cucumis sativus L. HOM05D000169 ORTHO05D007693 1.3e-10 70.9 64 48.4
Medtr1g043440 Medicago truncatula HOM05D000593 ORTHO05D004526 1.3e-10 70.9 64 48.4
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-10 70.9 71 46.5
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-10 70.9 87 42.5
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 1.3e-10 70.9 60 53.3
Medtr1g072330 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-10 69.7 74 43.2
Medtr2g026585 Medicago truncatula HOM05D007688 ORTHO05D004526 3.8e-10 69.3 148 31.1
Medtr2g461140 Medicago truncatula HOM05D000593 ORTHO05D004526 3.8e-10 69.3 64 48.4
Medtr1g103800 Medicago truncatula HOM05D003216 ORTHO05D002268 6.5e-10 68.6 87 40.2
Medtr5g060540 Medicago truncatula HOM05D003216 ORTHO05D002268 6.5e-10 68.6 102 36.3
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 8.5e-10 68.2 277 25.3
Medtr4g120790 Medicago truncatula HOM05D000593 ORTHO05D004526 8.5e-10 68.2 64 46.9
Medtr3g077875 Medicago truncatula HOM05D007688 ORTHO05D004526 1.4e-09 67.4 64 50.0
Medtr5g046245 Medicago truncatula HOM05D007688 ORTHO05D004526 1.9e-09 67.0 64 45.3
Medtr4g100470 Medicago truncatula HOM05D000593 ORTHO05D004526 2.5e-09 66.6 64 46.9
PSO339G5708 Papaver somniferum HOM05D000593 ORTHO05D000562 2.5e-09 66.6 60 55.0
Ca_14191_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 4.2e-09 65.9 61 50.8
Medtr2g027000 Medicago truncatula HOM05D007688 ORTHO05D004526 4.2e-09 65.9 64 45.3
VMungo0331G0649 Vigna mungo HOM05D000593 ORTHO05D004526 4.2e-09 65.9 60 53.3
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 5.5e-09 65.5 60 48.3
Aqoxy4G01994 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 5.5e-09 65.5 60 46.7
Medtr2g023130 Medicago truncatula HOM05D000593 ORTHO05D000562 7.2e-09 65.1 61 49.2
TWI15G1013 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.2e-09 65.1 64 45.3
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 9.4e-09 64.7 64 43.8
Medtr1g052890 Medicago truncatula HOM05D003216 ORTHO05D004526 9.4e-09 64.7 60 45.0
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 9.4e-09 64.7 88 36.4
Medtr7g056013 Medicago truncatula HOM05D003216 ORTHO05D002268 9.4e-09 64.7 86 36.0
CSS0048160 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.2e-08 64.3 63 49.2
Ca_04248_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.2e-08 64.3 61 47.5
Ca_19793_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 1.2e-08 64.3 60 48.3
PSO170G0662 Papaver somniferum HOM05D000593 ORTHO05D000562 1.2e-08 64.3 60 53.3
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 1.6e-08 63.9 64 45.3
CSS0017341 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.1e-08 63.5 71 43.7
Medtr5g006100 Medicago truncatula HOM05D003216 ORTHO05D004526 2.1e-08 63.5 64 46.9
TWI59G0448 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.1e-08 63.5 70 41.4
CSS0015084 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.7e-08 63.2 72 41.7
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 2.7e-08 63.2 87 36.8
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 2.7e-08 63.2 59 50.8
PSO017G5988 Papaver somniferum HOM05D000593 ORTHO05D000562 2.7e-08 63.2 60 53.3
TWI34G1957 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.7e-08 63.2 64 43.8
TWI79G0990 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.7e-08 63.2 70 41.4
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.6e-08 62.8 64 43.8
TWI36G1700 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.6e-08 62.8 70 41.4
Atru.chr7.1229 Acer truncatum HOM05D000593 ORTHO05D000562 4.7e-08 62.4 64 45.3
Ca_22767_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 4.7e-08 62.4 61 49.2
PSO423G0049 Papaver somniferum HOM05D000593 ORTHO05D000562 4.7e-08 62.4 60 51.7
PSO541G4860 Papaver somniferum HOM05D000593 ORTHO05D000562 4.7e-08 62.4 93 34.4
TPR.G54 Trifolium pratense HOM05D003216 ORTHO05D002268 4.7e-08 62.4 29 89.7
Aqoxy7G02090 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 6.1e-08 62.0 70 34.3
PSO478G4798 Papaver somniferum HOM05D000593 ORTHO05D000562 6.1e-08 62.0 60 53.3
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 6.1e-08 62.0 64 43.8
ECA234G3383 Erigeron canadensis HOM05D000593 ORTHO05D000562 7.9e-08 61.6 151 27.8
TWI63G0001 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.9e-08 61.6 70 40.0
Aqoxy7G01762 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.0e-07 61.2 63 36.5
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 1.0e-07 61.2 64 43.8
Medtr1g098990 Medicago truncatula HOM05D007688 ORTHO05D004526 1.0e-07 61.2 82 36.6
Oeu033650.1 Olea europaea HOM05D000593 ORTHO05D000562 1.0e-07 61.2 64 43.8
Atru.chr2.2322 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-07 60.8 64 45.3
Atru.chr2.2773 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-07 60.8 64 45.3
FvH4_5g13893 Fragaria vesca HOM05D000593 ORTHO05D000562 1.4e-07 60.8 61 47.5
Medtr3g044770 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-07 60.8 76 34.2
PSO339G0506 Papaver somniferum HOM05D000593 ORTHO05D000562 1.4e-07 60.8 60 51.7
PSO675G6516 Papaver somniferum HOM05D000593 ORTHO05D000562 1.4e-07 60.8 93 33.3
TWI36G0859 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.4e-07 60.8 64 45.3
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 1.8e-07 60.5 64 43.8
Medtr4g119600 Medicago truncatula HOM05D007688 ORTHO05D004526 1.8e-07 60.5 60 43.3
Medtr6g075990 Medicago truncatula HOM05D007688 ORTHO05D004526 1.8e-07 60.5 60 43.3
Medtr8g103800 Medicago truncatula HOM05D000593 ORTHO05D004526 1.8e-07 60.5 60 43.3
PSO591G0347 Papaver somniferum HOM05D000593 ORTHO05D000562 1.8e-07 60.5 93 33.3
TWI73G1073 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.8e-07 60.5 64 43.8
TWI77G0084 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.8e-07 60.5 61 44.3
Atru.chr6.964 Acer truncatum HOM05D000593 ORTHO05D000562 2.3e-07 60.1 64 45.3
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 2.3e-07 60.1 70 37.1
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.3e-07 60.1 64 43.8
Hma1.2p1_0622F.1_g190870 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.3e-07 60.1 64 43.8
Medtr0156s0040 Medicago truncatula HOM05D000593 ORTHO05D004526 2.3e-07 60.1 61 45.9
Medtr1g058140 Medicago truncatula HOM05D007688 ORTHO05D004526 2.3e-07 60.1 64 42.2
Medtr8g028020 Medicago truncatula HOM05D000593 ORTHO05D004526 2.3e-07 60.1 63 46.0
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 3.0e-07 59.7 63 42.9
Aqoxy2G01165 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 3.0e-07 59.7 70 37.1
Ca_05380_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 3.0e-07 59.7 59 45.8
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-07 59.7 60 46.7
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-07 59.7 60 46.7
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-07 59.7 60 46.7
TWI79G1065 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-07 59.7 60 46.7
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 3.9e-07 59.3 64 42.2
Ca_04412_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.9e-07 59.3 61 47.5
ECA247G3427 Erigeron canadensis HOM05D000593 ORTHO05D000562 3.9e-07 59.3 114 30.7
Gorai.004G152900 Gossypium raimondii HOM05D000593 ORTHO05D000562 3.9e-07 59.3 63 42.9
TWI14G0920 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.9e-07 59.3 64 43.8
TWI31G0075 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.9e-07 59.3 97 35.1
Atru.chr2.270 Acer truncatum HOM05D000593 ORTHO05D000562 5.1e-07 58.9 64 43.8
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 5.1e-07 58.9 196 27.6
PSO063G0602 Papaver somniferum HOM05D000593 ORTHO05D000562 5.1e-07 58.9 60 50.0
PSO447G0114 Papaver somniferum HOM05D000593 ORTHO05D000562 5.1e-07 58.9 60 48.3
PSO541G2752 Papaver somniferum HOM05D000593 ORTHO05D000562 5.1e-07 58.9 104 32.7
TWI53G0239 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.1e-07 58.9 64 43.8
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 6.7e-07 58.5 64 42.2
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 6.7e-07 58.5 64 43.8
Medtr0528s0010 Medicago truncatula HOM05D000593 ORTHO05D004526 6.7e-07 58.5 63 38.1
Medtr5g072970 Medicago truncatula HOM05D000593 ORTHO05D004526 6.7e-07 58.5 63 38.1
Medtr8g020433 Medicago truncatula HOM05D000593 ORTHO05D004526 6.7e-07 58.5 60 41.7
PSO210G1163 Papaver somniferum HOM05D000593 ORTHO05D000562 6.7e-07 58.5 59 50.8
Medtr7g067030 Medicago truncatula HOM05D003216 ORTHO05D002268 8.8e-07 58.2 77 35.1
TWI75G0858 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.8e-07 58.2 63 42.9
ECA234G4363 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.1e-06 57.8 114 30.7
ECA247G3961 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.1e-06 57.8 114 30.7
Medtr4g051890 Medicago truncatula HOM05D007688 ORTHO05D004526 1.1e-06 57.8 58 46.6
Medtr7g010970 Medicago truncatula HOM05D000593 ORTHO05D004526 1.1e-06 57.8 140 30.0
PSO386G0280 Papaver somniferum HOM05D000593 ORTHO05D000562 1.1e-06 57.8 61 42.6
Medtr7g056020 Medicago truncatula HOM05D000593 ORTHO05D000562 1.5e-06 57.4 58 43.1
Medtr7g106560 Medicago truncatula HOM05D007688 ORTHO05D004526 1.5e-06 57.4 64 39.1
Oeu035640.1 Olea europaea HOM05D000593 ORTHO05D000562 1.5e-06 57.4 63 41.3
PSO675G4622 Papaver somniferum HOM05D000593 ORTHO05D000562 1.5e-06 57.4 104 31.7
TWI09G1411 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.5e-06 57.4 60 43.3
Atru.chr3.3235 Acer truncatum HOM05D000593 ORTHO05D000562 2.0e-06 57.0 64 43.8
FvH4_6g12552 Fragaria vesca HOM05D000593 ORTHO05D000562 2.0e-06 57.0 64 39.1
Medtr3g067290 Medicago truncatula HOM05D007688 ORTHO05D004526 2.0e-06 57.0 60 40.0
Medtr3g467720 Medicago truncatula HOM05D007688 ORTHO05D004526 2.0e-06 57.0 60 40.0
PSO724G0353 Papaver somniferum HOM05D000593 ORTHO05D000562 2.0e-06 57.0 62 46.8
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 2.0e-06 57.0 61 49.2
TWI15G1107 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.0e-06 57.0 60 43.3
Gohir.D02G153950 Gossypium hirsutum HOM05D000593 ORTHO05D000562 2.6e-06 56.6 63 41.3
Gorai.005G173000 Gossypium raimondii HOM05D000593 ORTHO05D000562 2.6e-06 56.6 63 41.3
Hma1.2p1_1175F.1_g264110 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.6e-06 56.6 64 43.8
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 2.6e-06 56.6 64 42.2
TPR.G8656 Trifolium pratense HOM05D003216 ORTHO05D002268 2.6e-06 56.6 32 81.2
Atru.chr4.569 Acer truncatum HOM05D000593 ORTHO05D000562 3.3e-06 56.2 64 42.2
Medtr0116s0050 Medicago truncatula HOM05D007688 ORTHO05D004526 3.3e-06 56.2 60 40.0
Medtr3g462670 Medicago truncatula HOM05D007688 ORTHO05D004526 3.3e-06 56.2 63 39.7
Medtr8g446840 Medicago truncatula HOM05D007688 ORTHO05D004526 3.3e-06 56.2 47 53.2
PSO724G1093 Papaver somniferum HOM05D000593 ORTHO05D000562 3.3e-06 56.2 61 42.6
PSO832G0356 Papaver somniferum HOM05D000593 ORTHO05D000562 3.3e-06 56.2 60 43.3
TWI18G1400 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.3e-06 56.2 62 41.9
TWI77G0183 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.3e-06 56.2 60 41.7
Aqoxy2G01273 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 4.4e-06 55.8 70 35.7
ECA233G1851 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.4e-06 55.8 114 29.8
ECA247G4016 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.4e-06 55.8 114 29.8
Medtr2g030885 Medicago truncatula HOM05D003216 ORTHO05D002268 4.4e-06 55.8 88 37.5
Medtr7g024830 Medicago truncatula HOM05D007688 ORTHO05D004526 4.4e-06 55.8 53 43.4
TWI32G1239 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.4e-06 55.8 61 41.0
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.4e-06 55.8 70 38.6
ECA240G2752 Erigeron canadensis HOM05D000593 ORTHO05D000562 5.7e-06 55.5 91 35.2
Medtr0632s0010 Medicago truncatula HOM05D000593 ORTHO05D004526 5.7e-06 55.5 55 49.1
Medtr2g067930 Medicago truncatula HOM05D007688 ORTHO05D004526 5.7e-06 55.5 64 39.1
Medtr2g090505 Medicago truncatula HOM05D000593 ORTHO05D004526 5.7e-06 55.5 63 39.7
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 5.7e-06 55.5 82 37.8
Medtr4g057300 Medicago truncatula HOM05D000593 ORTHO05D004526 5.7e-06 55.5 64 40.6
Medtr7g034570 Medicago truncatula HOM05D007688 ORTHO05D004526 5.7e-06 55.5 61 44.3
PSO063G4888 Papaver somniferum HOM05D000593 ORTHO05D000562 5.7e-06 55.5 60 40.0
TWI31G1191 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.7e-06 55.5 64 40.6
TWI73G0171 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.7e-06 55.5 63 38.1
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.7e-06 55.5 63 41.3
PSO386G0138 Papaver somniferum HOM05D000593 ORTHO05D000562 7.4e-06 55.1 60 46.7
TWI32G0102 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.4e-06 55.1 53 45.3
Aqoxy7G02547 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 9.7e-06 54.7 70 31.4
FvH4_3g42601 Fragaria vesca HOM05D000593 ORTHO05D035479 9.7e-06 54.7 58 43.1
TWI15G0932 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.7e-06 54.7 63 41.3
TWI63G1156 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.7e-06 54.7 57 43.9


User provided reference genes

Program Settings