Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 1.5e-261 905.6 438 100.0
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 1.4e-246 855.9 438 94.1
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 3.1e-235 818.1 421 93.1
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 5.9e-234 813.9 437 89.2
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 2.1e-231 805.4 449 86.2
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 4.7e-231 804.3 444 86.7
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 6.7e-230 800.4 443 86.7
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 4.1e-227 791.2 426 87.6
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 1.6e-226 789.3 426 87.3
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 1.6e-223 779.2 439 85.9
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 9.5e-216 753.4 417 82.7
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 2.8e-212 741.9 438 78.5
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 2.9e-209 731.9 434 79.5
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 4.0e-206 721.5 434 79.3
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 8.9e-206 720.3 447 76.7
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 1.2e-205 719.9 420 79.8
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 2.6e-205 718.8 420 80.2
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 2.9e-204 715.3 439 78.4
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 2.4e-203 712.2 424 77.8
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 7.0e-203 710.7 420 79.8
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 1.2e-202 709.9 417 79.4
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 6.0e-202 707.6 418 79.9
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 3.9e-201 704.9 432 77.1
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 5.0e-201 704.5 417 79.1
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 1.1e-200 703.4 426 77.2
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 1.1e-198 696.8 424 77.6
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 5.2e-198 694.5 419 76.8
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 1.7e-196 689.5 422 76.5
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 3.7e-196 688.3 426 74.6
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 1.9e-195 686.0 408 78.7
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 1.9e-195 686.0 484 69.2
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 3.2e-195 685.3 425 75.5
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 5.4e-195 684.5 421 75.3
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 5.4e-195 684.5 430 75.1
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 7.0e-195 684.1 418 77.5
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.2e-194 683.3 429 75.3
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 1.3e-193 679.9 434 74.0
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 1.3e-193 679.9 434 74.0
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 1.7e-193 679.5 363 90.6
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 2.3e-193 679.1 439 72.2
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.9e-193 678.3 433 74.8
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 3.9e-193 678.3 424 75.5
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 5.1e-193 677.9 428 74.8
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 1.1e-192 676.8 439 72.4
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 1.9e-192 676.0 440 73.4
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 1.9e-192 676.0 427 72.8
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 3.3e-192 675.2 423 74.5
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.3e-192 674.9 443 74.0
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 9.5e-192 673.7 422 74.6
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 2.1e-191 672.5 422 74.2
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 3.6e-191 671.8 422 73.7
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 3.6e-191 671.8 450 72.0
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.8e-190 669.5 420 75.5
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 4.0e-190 668.3 442 72.6
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 6.8e-190 667.5 452 72.1
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 3.4e-189 665.2 433 72.7
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 5.8e-189 664.5 433 73.0
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 7.5e-189 664.1 422 74.2
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 2.1e-186 656.0 421 74.6
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 6.8e-182 641.0 427 71.2
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 1.3e-180 636.7 363 81.0
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 4.2e-179 631.7 422 71.6
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 6.0e-178 627.9 371 79.5
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 1.0e-177 627.1 563 58.4
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.1e-176 623.6 391 76.5
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.1e-176 623.6 360 80.3
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 1.6e-175 619.8 406 72.4
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 4.7e-175 618.2 406 73.4
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.1e-174 615.5 421 71.5
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 2.6e-173 612.5 551 58.8
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 9.9e-173 610.5 434 68.0
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 6.4e-172 607.8 405 69.9
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 1.7e-169 599.7 415 67.5
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 4.3e-168 595.1 444 68.2
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 2.6e-165 585.9 378 73.3
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 1.7e-164 583.2 379 72.6
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 1.4e-158 563.5 319 81.8
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 9.3e-155 550.8 317 81.1
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 2.1e-154 549.7 363 72.7
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 1.3e-151 540.4 350 71.7
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 2.2e-148 529.6 376 66.2
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.1e-146 523.1 354 69.8
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 1.4e-139 500.4 424 61.1
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 2.0e-136 490.0 284 80.3
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 2.0e-133 479.9 365 65.2
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 3.5e-125 452.6 376 58.8
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 1.2e-117 427.6 410 52.9
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 1.7e-116 423.7 406 51.7
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 3.0e-113 412.9 314 64.0
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 1.4e-110 404.1 403 47.4
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 2.2e-108 396.7 405 49.6
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 2.6e-104 383.3 233 76.0
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 1.5e-88 330.9 202 78.2
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 1.9e-86 323.9 232 65.9
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.4e-81 307.8 230 64.8
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 4.0e-65 253.1 426 36.9
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.2e-64 251.5 146 80.1
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 5.1e-60 236.1 401 36.9
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.6e-59 231.9 126 85.7
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 2.0e-56 224.2 175 65.1
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 3.2e-46 190.3 228 46.9
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-43 181.0 177 50.3
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 2.0e-40 171.0 137 64.2
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 5.8e-40 169.5 408 28.2
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 3.8e-39 166.8 432 30.8
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 5.5e-38 162.9 88 84.1
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 5.1e-36 156.4 89 80.9
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 2.2e-31 141.0 114 60.5
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 3.7e-26 123.6 72 79.2
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 5.3e-25 119.8 124 46.8
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 3.6e-21 107.1 83 60.2
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 2.4e-17 94.4 72 59.7
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 2.4e-17 94.4 65 67.7
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 5.9e-16 89.7 56 67.9
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.7e-15 88.2 45 88.9
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 5.7e-11 73.2 42 69.0
arahy.Tifrunner.gnm1.ann1.JG4R8Z Arachis hypogaea HOM05D034686 ORTHO05D082558 5.0e-07 60.1 43 65.1
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.5e-06 58.5 48 54.2
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 7.2e-06 56.2 37 73.0
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 7.2e-06 56.2 37 73.0


User provided reference genes

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