Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22262 Trifolium pratense HOM05D000361 ORTHO05D023782 2.5e-68 261.9 127 100.0
Ca_17753_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008294 9.0e-34 147.1 203 45.8
TPR.G6256 Trifolium pratense HOM05D000361 ORTHO05D008294 9.0e-34 147.1 203 45.8
Medtr8g090000 Medicago truncatula HOM05D000361 ORTHO05D008294 7.6e-33 144.1 203 45.3
Glyma.09G047300 Glycine max HOM05D000361 ORTHO05D008294 9.9e-33 143.7 212 43.4
Phvul.009G245600 Phaseolus vulgaris HOM05D000361 ORTHO05D008294 1.7e-32 142.9 212 43.9
Medtr2g437540 Medicago truncatula HOM05D000361 ORTHO05D008294 2.9e-32 142.1 203 45.3
Psat7g056760 Pisum sativum HOM05D000361 ORTHO05D008294 3.8e-32 141.7 203 44.8
VMungo1309G2334 Vigna mungo HOM05D000361 ORTHO05D008294 1.1e-31 140.2 212 43.4
Lj6g0011881 Lotus japonicus HOM05D000361 ORTHO05D008294 2.4e-31 139.0 198 44.4
arahy.Tifrunner.gnm1.ann1.QR0DXW Arachis hypogaea HOM05D000361 ORTHO05D008294 1.2e-30 136.7 203 42.4
Lalb_Chr18g0051851 Lupinus albus HOM05D000361 ORTHO05D008294 2.1e-30 136.0 203 42.4
Thecc.02G000800 Theobroma cacao HOM05D000361 ORTHO05D008294 2.1e-30 136.0 203 42.4
arahy.Tifrunner.gnm1.ann1.76Y6MV Arachis hypogaea HOM05D000361 ORTHO05D008294 3.5e-30 135.2 203 41.9
Glyma.15G154900 Glycine max HOM05D000361 ORTHO05D008294 3.5e-30 135.2 221 41.6
Duzib132G1205 Durio zibethinus HOM05D000361 ORTHO05D008294 6.0e-30 134.4 203 42.4
Gohir.A03G218100 Gossypium hirsutum HOM05D000361 ORTHO05D008294 2.3e-29 132.5 191 42.9
Cpa.g.sc30.68 Carica papaya HOM05D000361 ORTHO05D008294 6.7e-29 131.0 203 41.4
QL11p010760 Quercus lobata HOM05D000361 ORTHO05D008294 8.7e-29 130.6 204 42.6
Ciclev10014269m.g Citrus clementina HOM05D000361 ORTHO05D008294 1.1e-28 130.2 195 42.6
CSS0044464 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008294 3.3e-28 128.6 204 42.2
Rhsim13G0136200 Rhododendron simsii HOM05D000361 ORTHO05D008294 3.3e-28 128.6 204 41.7
vmacro03573 Vaccinium macrocarpon HOM05D000361 ORTHO05D008294 3.3e-28 128.6 204 41.2
Gohir.D02G240100 Gossypium hirsutum HOM05D000361 ORTHO05D008294 4.3e-28 128.3 203 40.9
Manes.16G060200 Manihot esculenta HOM05D000361 ORTHO05D008294 7.4e-28 127.5 196 41.8
Nn1g09868 Nelumbo nucifera HOM05D000361 ORTHO05D008294 7.4e-28 127.5 194 41.2
Gorai.005G268500 Gossypium raimondii HOM05D000361 ORTHO05D008294 9.6e-28 127.1 203 40.4
CsaV3_6G053180 Cucumis sativus L. HOM05D000361 ORTHO05D008294 1.3e-27 126.7 203 39.9
CANSAT35G1399 Cannabis sativa HOM05D000361 ORTHO05D008294 1.6e-27 126.3 204 41.2
Hund20134 Selenicereus undatus HOM05D000361 ORTHO05D008294 1.6e-27 126.3 200 42.5
TWI63G1117 Tripterygium wilfordii HOM05D000361 ORTHO05D008294 1.6e-27 126.3 199 42.7
MBI06_g26561_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D008294 2.1e-27 125.9 199 40.7
CiPaw.09G140700 Carya illinoinensis HOM05D000361 ORTHO05D008294 3.7e-27 125.2 196 42.9
Potri.001G074000 Populus trichocarpa HOM05D000361 ORTHO05D008294 4.8e-27 124.8 204 40.7
Sabra01G0052300 Salix brachista HOM05D000361 ORTHO05D008294 4.8e-27 124.8 196 40.8
THA.LOC104811945 Tarenaya hassleriana HOM05D000361 ORTHO05D008294 4.8e-27 124.8 203 40.4
GSVIVG01003253001 Vitis vinifera HOM05D000361 ORTHO05D008294 4.8e-27 124.8 196 41.3
Haze_05186 Corylus avellana HOM05D000361 ORTHO05D008294 6.2e-27 124.4 204 40.2
PGR044G0817 Punica granatum HOM05D000361 ORTHO05D008294 6.2e-27 124.4 204 40.7
Sp2g09450 Schrenkiella parvula HOM05D000361 ORTHO05D008294 8.2e-27 124.0 196 40.8
Sc24g0002810 Simmondsia chinensis HOM05D000361 ORTHO05D008294 1.1e-26 123.6 197 41.6
Eucgr.D00002 Eucalyptus grandis HOM05D000361 ORTHO05D008294 1.8e-26 122.9 196 40.8
Cfa001165 Carpinus fangiana HOM05D000361 ORTHO05D008294 2.4e-26 122.5 204 39.7
Dinv07937 Davidia involucrata HOM05D000361 ORTHO05D008294 2.4e-26 122.5 196 40.3
Dinv18416 Davidia involucrata HOM05D000361 ORTHO05D008294 2.4e-26 122.5 196 40.3
MD05G1242400 Malus domestica HOM05D000361 ORTHO05D008294 2.4e-26 122.5 192 41.1
MD10G1224200 Malus domestica HOM05D000361 ORTHO05D008294 2.4e-26 122.5 192 41.1
Cc09_g04600 Coffea canephora HOM05D000361 ORTHO05D008294 3.1e-26 122.1 203 38.4
AL8G14990 Arabidopsis lyrata HOM05D000361 ORTHO05D008294 4.0e-26 121.7 196 40.3
AT5G44635 Arabidopsis thaliana HOM05D000361 ORTHO05D008294 4.0e-26 121.7 196 40.3
BcaC06g31601 Brassica carinata HOM05D000361 ORTHO05D008294 4.0e-26 121.7 196 40.3
A06p47040 Brassica napus HOM05D000361 ORTHO05D008294 4.0e-26 121.7 196 40.3
C07p27530 Brassica napus HOM05D000361 ORTHO05D008294 4.0e-26 121.7 196 40.3
BolC7t43284H Brassica oleracea HOM05D000361 ORTHO05D008294 4.0e-26 121.7 196 40.3
BraA06t27577Z Brassica rapa HOM05D000361 ORTHO05D008294 4.0e-26 121.7 196 40.3
BcaC06g34528 Brassica carinata HOM05D000361 ORTHO05D008294 5.3e-26 121.3 196 40.3
CARHR178260 Cardamine hirsuta HOM05D000361 ORTHO05D008294 5.3e-26 121.3 196 40.3
Carub.0008s0363 Capsella rubella HOM05D000361 ORTHO05D008294 9.0e-26 120.6 196 39.8
Sed0009371 Sechium edule HOM05D000361 ORTHO05D008294 9.0e-26 120.6 203 39.4
Thhalv10000779m.g Eutrema salsugineum HOM05D000361 ORTHO05D008294 1.2e-25 120.2 196 40.3
PSO541G2719 Papaver somniferum HOM05D000361 ORTHO05D008294 1.2e-25 120.2 194 40.2
PSO675G8445 Papaver somniferum HOM05D000361 ORTHO05D008294 1.2e-25 120.2 194 40.2
Peaxi162Scf00036g00321 Petunia axillaris HOM05D000361 ORTHO05D008294 1.2e-25 120.2 204 38.7
TAR627G0013 Trochodendron aralioides HOM05D000361 ORTHO05D008294 1.2e-25 120.2 196 39.3
CAN.G809.9 Capsicum annuum HOM05D000361 ORTHO05D008294 1.5e-25 119.8 204 38.7
Prupe.4G121000 Prunus persica HOM05D000361 ORTHO05D008294 2.6e-25 119.0 196 39.3
Ah.15g091830 Amaranthus hybridus HOM05D000361 ORTHO05D008294 4.5e-25 118.2 200 40.5
Nitab4.5_0001815g0090 Nicotiana tabacum HOM05D000361 ORTHO05D008294 4.5e-25 118.2 194 39.7
Nitab4.5_0007687g0010 Nicotiana tabacum HOM05D000361 ORTHO05D008294 4.5e-25 118.2 194 39.7
RcHm_v2.0_Chr5g0022071 Rosa chinensis HOM05D000361 ORTHO05D008294 4.5e-25 118.2 196 39.8
PGSC0003DMG400013633 Solanum tuberosum HOM05D000361 ORTHO05D008294 4.5e-25 118.2 194 39.2
AUR62040986 Chenopodium quinoa HOM05D000361 ORTHO05D008294 5.8e-25 117.9 200 40.5
COL.COLO4_25023 Corchorus olitorius HOM05D000361 ORTHO05D008294 5.8e-25 117.9 198 40.9
EL10Ac7g17302 Beta vulgaris HOM05D000361 ORTHO05D008294 7.6e-25 117.5 200 40.5
FvH4_3g13360 Fragaria vesca HOM05D000361 ORTHO05D008294 7.6e-25 117.5 196 39.3
FAN11G3268 Fragaria x ananassa HOM05D000361 ORTHO05D008294 7.6e-25 117.5 196 39.3
FAN16G0385 Fragaria x ananassa HOM05D000361 ORTHO05D008294 7.6e-25 117.5 196 39.3
FAN21G0569 Fragaria x ananassa HOM05D000361 ORTHO05D008294 7.6e-25 117.5 196 39.3
FAN25G0043 Fragaria x ananassa HOM05D000361 ORTHO05D008294 7.6e-25 117.5 196 39.3
FAN25G0195 Fragaria x ananassa HOM05D000361 ORTHO05D008294 7.6e-25 117.5 196 39.3
Solyc02g082180.3 Solanum lycopersicum HOM05D000361 ORTHO05D008294 7.6e-25 117.5 194 39.2
Sopen02g026840 Solanum pennellii HOM05D000361 ORTHO05D008294 7.6e-25 117.5 194 39.2
C02p45220 Brassica napus HOM05D000361 ORTHO05D008294 2.2e-24 115.9 196 38.8
AUR62042103 Chenopodium quinoa HOM05D000361 ORTHO05D008294 2.9e-24 115.5 200 39.5
BcaC03g16683 Brassica carinata HOM05D000361 ORTHO05D008294 4.9e-24 114.8 196 39.3
Oeu039911.1 Olea europaea HOM05D000361 ORTHO05D008294 4.9e-24 114.8 198 37.9
BolC2t10553H Brassica oleracea HOM05D000361 ORTHO05D008294 6.5e-24 114.4 196 38.8
MSTRG.13294 Avicennia marina HOM05D000361 ORTHO05D008294 1.1e-23 113.6 203 37.4
CDE10G0589 Ceratophyllum demersum HOM05D000361 ORTHO05D008294 1.1e-23 113.6 205 40.0
Lj1C1152G4 Lonicera japonica HOM05D000361 ORTHO05D008294 1.1e-23 113.6 198 39.4
Aa31LG9G8530 Aethionema arabicum HOM05D000361 ORTHO05D008294 4.2e-23 111.7 196 38.3
ECA240G0581 Erigeron canadensis HOM05D000361 ORTHO05D008294 9.3e-23 110.5 194 38.1
Migut.H01418 Erythranthe guttata HOM05D000361 ORTHO05D008294 1.6e-22 109.8 198 36.9
HPP92_000506 Vanilla planifolia HOM05D000361 ORTHO05D008294 2.1e-22 109.4 196 36.2
SGA_v2.0_scaffold341G49368 Striga asiatica HOM05D000361 ORTHO05D008294 2.7e-22 109.0 203 36.9
HanXRQChr07g0187741 Helianthus annuus HOM05D000361 ORTHO05D008294 7.9e-22 107.5 196 38.3
Aqoxy1G01354 Aquilegia oxysepala HOM05D000361 ORTHO05D008294 1.3e-21 106.7 194 37.1
Os05g0235800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D008294 1.3e-21 106.7 199 36.2
DCAR_003731 Daucus carota HOM05D000361 ORTHO05D008294 2.3e-21 105.9 199 38.7
SalBow6G3398 Salvia bowleyana HOM05D000361 ORTHO05D008294 6.7e-21 104.4 204 37.7
SalBow6G5453 Salvia bowleyana HOM05D000361 ORTHO05D008294 6.7e-21 104.4 204 37.7
SEGI_18737 Sequoiadendron giganteum HOM05D000361 ORTHO05D008294 6.7e-21 104.4 194 35.6
ATR0737G139 Amborella trichopoda HOM05D000361 ORTHO05D008294 8.7e-21 104.0 194 35.1
Lsat_1_v5_gn_9_100181 Lactuca sativa HOM05D000361 ORTHO05D008294 1.5e-20 103.2 200 37.5
Zm00001eb284360 Zea mays HOM05D000361 ORTHO05D008294 1.6e-19 99.8 199 36.2
SHI08119 Sapria himalayana HOM05D000361 ORTHO05D008294 6.3e-19 97.8 194 34.5
unitig_37.g13054 Utricularia gibba HOM05D000361 ORTHO05D008294 1.1e-18 97.1 203 36.0
ClCG01G025960 Citrullus lanatus HOM05D000361 ORTHO05D008294 6.9e-18 94.4 198 34.8
A02p28500 Brassica napus HOM05D000361 ORTHO05D023782 1.3e-16 90.1 76 61.8
BraA02t07885Z Brassica rapa HOM05D000361 ORTHO05D023782 1.3e-16 90.1 76 61.8
Atru.chr10.231 Acer truncatum HOM05D000361 ORTHO05D008294 3.8e-16 88.6 75 64.0
PSO541G6368 Papaver somniferum HOM05D000361 ORTHO05D008294 4.2e-15 85.1 66 66.7
SMO364G0539 Selaginella moellendorffii HOM05D000361 ORTHO05D008294 4.2e-15 85.1 201 32.3
MELO3C006995.2 Cucumis melo HOM05D000361 ORTHO05D008294 6.1e-14 81.3 47 80.9
AagrBONN_evm.TU.Sc2ySwM_368.1744 Anthoceros agrestis HOM05D000361 ORTHO05D008294 1.4e-13 80.1 203 32.0
Rhsim13G0136600 Rhododendron simsii HOM05D000361 ORTHO05D023782 1.7e-11 73.2 71 54.9
Zm00001eb350340 Zea mays HOM05D000361 ORTHO05D008294 2.2e-11 72.8 71 57.7
CBR_g12702 Chara braunii HOM05D000361 ORTHO05D008294 4.8e-11 71.6 47 70.2
Pp3c23_390 Physcomitrium patens HOM05D000361 ORTHO05D008294 1.4e-10 70.1 47 68.1
Mapoly0119s0016 Marchantia polymorpha HOM05D000361 ORTHO05D008294 5.3e-10 68.2 47 68.1
PRCOL_00003449 Prasinoderma coloniale HOM05D000361 ORTHO05D008294 4.5e-09 65.1 58 58.6
arahy.Tifrunner.gnm1.ann1.NRBM4R Arachis hypogaea HOM05D000361 ORTHO05D023782 8.5e-08 60.8 45 68.9
Cre03.g178650 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D008294 4.2e-07 58.5 59 49.2


User provided reference genes

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