Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2215 Trifolium pratense HOM05D010746 ORTHO05D009732 2.9e-38 161.4 81 100.0
Psat7g050120 Pisum sativum HOM05D010746 ORTHO05D009732 1.5e-26 122.5 78 79.5
Medtr8g092340 Medicago truncatula HOM05D010746 ORTHO05D009732 1.8e-24 115.5 78 78.2
Lj4g0014601 Lotus japonicus HOM05D010746 ORTHO05D009732 5.9e-23 110.5 83 68.7
Phvul.009G138100 Phaseolus vulgaris HOM05D010746 ORTHO05D009732 4.0e-19 97.8 82 63.4
Glyma.05G186400 Glycine max HOM05D010746 ORTHO05D009732 3.4e-18 94.7 84 60.7
Glyma.04G217600 Glycine max HOM05D010746 ORTHO05D009732 9.8e-18 93.2 82 64.6
Glyma.06G148200 Glycine max HOM05D010746 ORTHO05D009732 1.7e-17 92.4 82 63.4
Lj1g0003131 Lotus japonicus HOM05D010746 ORTHO05D009732 9.2e-16 86.7 86 61.6
arahy.Tifrunner.gnm1.ann1.Z046N5 Arachis hypogaea HOM05D010746 ORTHO05D009732 2.0e-15 85.5 81 61.7
Lalb_Chr12g0203401 Lupinus albus HOM05D010746 ORTHO05D009732 7.8e-15 83.6 82 59.8
Psat5g065200 Pisum sativum HOM05D010746 ORTHO05D009732 6.6e-14 80.5 83 57.8
Medtr3g095180 Medicago truncatula HOM05D010746 ORTHO05D009732 3.3e-13 78.2 85 52.9
arahy.Tifrunner.gnm1.ann1.Q4N452 Arachis hypogaea HOM05D010746 ORTHO05D009732 1.2e-12 76.3 77 59.7
arahy.Tifrunner.gnm1.ann1.R1SWRL Arachis hypogaea HOM05D010746 ORTHO05D009732 1.2e-12 76.3 76 60.5
Lalb_Chr07g0184691 Lupinus albus HOM05D010746 ORTHO05D009732 1.2e-12 76.3 79 55.7
TPR.G227 Trifolium pratense HOM05D010746 ORTHO05D009732 1.6e-12 75.9 84 53.6
arahy.Tifrunner.gnm1.ann1.4A1U07 Arachis hypogaea HOM05D010746 ORTHO05D009732 4.0e-11 71.2 87 51.7
CiPaw.04G088900 Carya illinoinensis HOM05D008370 ORTHO05D009732 7.5e-10 67.0 75 53.3
Glyma.05G186300 Glycine max HOM05D008370 ORTHO05D009732 7.5e-10 67.0 79 48.1
Glyma.08G144800 Glycine max HOM05D008370 ORTHO05D009732 1.7e-09 65.9 79 46.8
Lalb_Chr12g0203411 Lupinus albus HOM05D008370 ORTHO05D009732 2.9e-09 65.1 83 47.0
Sabra07G0065300 Salix brachista HOM05D008370 ORTHO05D009732 2.9e-09 65.1 83 51.8
Lj1g0003311 Lotus japonicus HOM05D008370 ORTHO05D009732 4.9e-09 64.3 79 44.3
Potri.005G087000 Populus trichocarpa HOM05D008370 ORTHO05D009732 4.9e-09 64.3 84 52.4
Potri.007G077300 Populus trichocarpa HOM05D008370 ORTHO05D009732 4.9e-09 64.3 84 53.6
Glyma.04G217800 Glycine max HOM05D008370 ORTHO05D009732 8.3e-09 63.5 79 43.0
Phvul.002G267404 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 1.1e-08 63.2 76 48.7
Glyma.06G148100 Glycine max HOM05D008370 ORTHO05D009732 1.4e-08 62.8 81 42.0
COL.COLO4_17423 Corchorus olitorius HOM05D008370 ORTHO05D009732 2.4e-08 62.0 74 50.0
QL06p031379 Quercus lobata HOM05D008370 ORTHO05D009732 4.1e-08 61.2 73 45.2
TPR.G2226 Trifolium pratense HOM05D008370 ORTHO05D009732 4.1e-08 61.2 78 44.9
CiPaw.04G088800 Carya illinoinensis HOM05D008370 ORTHO05D009732 5.4e-08 60.8 75 48.0
Lj4g0015780 Lotus japonicus HOM05D008370 ORTHO05D009732 5.4e-08 60.8 77 44.2
Thecc.07G145600 Theobroma cacao HOM05D008370 ORTHO05D009732 7.1e-08 60.5 76 50.0
Dinv05773 Davidia involucrata HOM05D008370 ORTHO05D009732 9.2e-08 60.1 74 45.9
arahy.Tifrunner.gnm1.ann1.3XNV5U Arachis hypogaea HOM05D008370 ORTHO05D009732 1.6e-07 59.3 76 48.7
Prupe.6G166000 Prunus persica HOM05D015647 ORTHO05D009732 2.1e-07 58.9 82 50.0
TPR.G8284 Trifolium pratense HOM05D010746 ORTHO05D009732 3.5e-07 58.2 84 45.2
Glyma.08G145000 Glycine max HOM05D010746 ORTHO05D009732 1.0e-06 56.6 49 55.1
COL.COLO4_22370 Corchorus olitorius HOM05D008370 ORTHO05D009732 1.3e-06 56.2 84 47.6
Phvul.009G138200 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 1.3e-06 56.2 75 44.0
Cpa.g.sc72.52 Carica papaya HOM05D008370 ORTHO05D009732 1.7e-06 55.8 71 49.3
Cfa002787 Carpinus fangiana HOM05D008370 ORTHO05D009732 1.7e-06 55.8 76 48.7
Cfa002786 Carpinus fangiana HOM05D008370 ORTHO05D009732 2.3e-06 55.5 76 47.4
Haze_25084 Corylus avellana HOM05D008370 ORTHO05D009732 2.3e-06 55.5 76 47.4
CSS0039971 Camellia sinensis var. sinensis HOM05D008370 ORTHO05D009732 3.0e-06 55.1 75 45.3
Actinidia01380 Actinidia chinensis HOM05D008370 ORTHO05D009732 3.9e-06 54.7 79 38.0
Actinidia12221 Actinidia chinensis HOM05D008370 ORTHO05D009732 3.9e-06 54.7 85 41.2
arahy.Tifrunner.gnm1.ann1.G5B6SC Arachis hypogaea HOM05D008370 ORTHO05D009732 5.1e-06 54.3 86 38.4
arahy.Tifrunner.gnm1.ann1.U48W6H Arachis hypogaea HOM05D008370 ORTHO05D009732 5.1e-06 54.3 86 39.5
Gohir.A01G042000 Gossypium hirsutum HOM05D008370 ORTHO05D009732 5.1e-06 54.3 78 48.7
Sabra05G0071700 Salix brachista HOM05D008370 ORTHO05D009732 6.6e-06 53.9 82 45.1
Sed0018859 Sechium edule HOM05D029062 ORTHO05D009732 6.6e-06 53.9 77 45.5
TAR376G0884 Trochodendron aralioides HOM05D008370 ORTHO05D009732 6.6e-06 53.9 82 40.2
Eucgr.I00294 Eucalyptus grandis HOM05D008370 ORTHO05D009732 8.6e-06 53.5 72 44.4
Psat7g050080 Pisum sativum HOM05D008370 ORTHO05D009732 8.6e-06 53.5 82 42.7


User provided reference genes

Program Settings