Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22126 Trifolium pratense HOM05D000557 ORTHO05D410911 5.6e-29 130.2 62 100.0
Lj3g0007601 Lotus japonicus HOM05D000557 ORTHO05D000853 4.1e-08 60.8 44 68.2
Medtr2g065470 Medicago truncatula HOM05D000557 ORTHO05D000853 4.1e-08 60.8 44 65.9
ClCG09G022760 Citrullus lanatus HOM05D000557 ORTHO05D000853 5.4e-08 60.5 55 50.9
Glyma.16G081400 Glycine max HOM05D000557 ORTHO05D000853 7.1e-08 60.1 44 65.9
Glyma.03G092700 Glycine max HOM05D000557 ORTHO05D000853 9.2e-08 59.7 44 65.9
MBI18_g20608_MAGBIO Magnolia biondii HOM05D000557 ORTHO05D000853 9.2e-08 59.7 40 70.0
Psat1g005000 Pisum sativum HOM05D000557 ORTHO05D000853 9.2e-08 59.7 44 65.9
TPR.G1595 Trifolium pratense HOM05D000557 ORTHO05D000853 9.2e-08 59.7 33 84.8
vmacro09769 Vaccinium macrocarpon HOM05D000557 ORTHO05D000853 1.2e-07 59.3 55 50.9
Phvul.005G059200 Phaseolus vulgaris HOM05D000557 ORTHO05D000853 3.5e-07 57.8 44 65.9
SalBow8G2782 Salvia bowleyana HOM05D000557 ORTHO05D000853 3.5e-07 57.8 55 50.9
Ca_03550_v3 Cicer arietinum L. HOM05D000557 ORTHO05D000853 4.6e-07 57.4 33 78.8
Lalb_Chr25g0284501 Lupinus albus HOM05D000557 ORTHO05D000853 4.6e-07 57.4 33 78.8
Cfa019389 Carpinus fangiana HOM05D000557 ORTHO05D000853 6.0e-07 57.0 41 63.4
unitig_748.g7618 Utricularia gibba HOM05D000557 ORTHO05D000853 7.8e-07 56.6 55 45.5
VMungo1080G0678 Vigna mungo HOM05D000557 ORTHO05D000853 7.8e-07 56.6 44 63.6
arahy.Tifrunner.gnm1.ann1.F06IQB Arachis hypogaea HOM05D000557 ORTHO05D000853 1.0e-06 56.2 44 59.1
Haze_07787 Corylus avellana HOM05D000557 ORTHO05D000853 1.0e-06 56.2 55 49.1
Nn7g38193 Nelumbo nucifera HOM05D000557 ORTHO05D000853 1.3e-06 55.8 33 72.7
ATR0787G091 Amborella trichopoda HOM05D000557 ORTHO05D000853 1.7e-06 55.5 32 75.0
Nitab4.5_0008957g0030 Nicotiana tabacum HOM05D000557 ORTHO05D000853 1.7e-06 55.5 55 47.3
TWI38G1731 Tripterygium wilfordii HOM05D000557 ORTHO05D000853 1.7e-06 55.5 33 72.7
vmacro11691 Vaccinium macrocarpon HOM05D000557 ORTHO05D000853 1.7e-06 55.5 55 47.3
ATR0763G162 Amborella trichopoda HOM05D000557 ORTHO05D000853 2.3e-06 55.1 33 72.7
SEGI_10905 Sequoiadendron giganteum HOM05D000557 ORTHO05D000853 2.3e-06 55.1 33 72.7
TAR625G0491 Trochodendron aralioides HOM05D000557 ORTHO05D000853 2.3e-06 55.1 33 69.7
arahy.Tifrunner.gnm1.ann1.5PGU74 Arachis hypogaea HOM05D000557 ORTHO05D000853 3.0e-06 54.7 44 56.8
BcaB02g06609 Brassica carinata HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 75.8
BcaC05g25586 Brassica carinata HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 75.8
A06p12220 Brassica napus HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 75.8
C05p14460 Brassica napus HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 75.8
BolC5t30172H Brassica oleracea HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 75.8
BraA06t24390Z Brassica rapa HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 75.8
CARHR016770 Cardamine hirsuta HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 75.8
Thhalv10007716m.g Eutrema salsugineum HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 75.8
Sp1g14490 Schrenkiella parvula HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 75.8
TWI38G0531 Tripterygium wilfordii HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 69.7
TAR624G1170 Trochodendron aralioides HOM05D000557 ORTHO05D000853 3.0e-06 54.7 33 69.7
Ciclev10005029m.g Citrus clementina HOM05D000557 ORTHO05D000853 3.9e-06 54.3 33 69.7
Sed0017423 Sechium edule HOM05D000557 ORTHO05D000853 3.9e-06 54.3 33 72.7
AL2G40170 Arabidopsis lyrata HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
BcaB02g07221 Brassica carinata HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
BcaB05g25204 Brassica carinata HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
BcaC03g15902 Brassica carinata HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
A02p22880 Brassica napus HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
A07p27090 Brassica napus HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
C02p36690 Brassica napus HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
C06p29840 Brassica napus HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
BolC2t09664H Brassica oleracea HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
BraA02t07288Z Brassica rapa HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
BraA07t30354Z Brassica rapa HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
Carub.0002s2639 Capsella rubella HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
Sp5g34590 Schrenkiella parvula HOM05D000557 ORTHO05D000853 5.1e-06 53.9 33 72.7
CDE05G1010 Ceratophyllum demersum HOM05D000557 ORTHO05D000853 6.6e-06 53.5 55 41.8
AUR62041490 Chenopodium quinoa HOM05D000557 ORTHO05D000853 6.6e-06 53.5 41 58.5
Lj2C12T18 Lonicera japonica HOM05D000557 ORTHO05D000853 6.6e-06 53.5 33 69.7
Potri.010G172400 Populus trichocarpa HOM05D000557 ORTHO05D000853 6.6e-06 53.5 33 63.6
QL04p090732 Quercus lobata HOM05D000557 ORTHO05D000853 6.6e-06 53.5 33 69.7
QL09p016656 Quercus lobata HOM05D000557 ORTHO05D000853 6.6e-06 53.5 33 69.7
Hund12025 Selenicereus undatus HOM05D000557 ORTHO05D000853 6.6e-06 53.5 30 76.7
Aa31LG4G1480 Aethionema arabicum HOM05D000557 ORTHO05D000853 8.6e-06 53.1 33 69.7
AT1G79530 Arabidopsis thaliana HOM05D000557 ORTHO05D000853 8.6e-06 53.1 33 72.7
Thhalv10018604m.g Eutrema salsugineum HOM05D000557 ORTHO05D000853 8.6e-06 53.1 33 72.7
Gohir.A01G098600 Gossypium hirsutum HOM05D000557 ORTHO05D000853 8.6e-06 53.1 33 69.7
Gorai.002G108700 Gossypium raimondii HOM05D000557 ORTHO05D000853 8.6e-06 53.1 33 69.7
MBI15_g07478_MAGBIO Magnolia biondii HOM05D000557 ORTHO05D017776 8.6e-06 53.1 33 72.7
Manes.06G176700 Manihot esculenta HOM05D000557 ORTHO05D000853 8.6e-06 53.1 33 72.7
THA.LOC104808134 Tarenaya hassleriana HOM05D000557 ORTHO05D000853 8.6e-06 53.1 33 69.7
GSVIVG01036751001 Vitis vinifera HOM05D000557 ORTHO05D000853 8.6e-06 53.1 33 66.7


User provided reference genes

Program Settings