Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22061 Trifolium pratense HOM05D000036 ORTHO05D000095 1.1e-54 216.5 115 100.0
TPR.G27386 Trifolium pratense HOM05D000036 ORTHO05D000095 7.1e-46 187.2 117 88.9
Medtr2g044810 Medicago truncatula HOM05D000036 ORTHO05D000095 2.1e-45 185.7 116 85.3
Glyma.15G184100 Glycine max HOM05D000036 ORTHO05D000095 6.7e-36 154.1 115 70.4
Glyma.09G076200 Glycine max HOM05D000036 ORTHO05D000095 1.8e-33 146.0 116 68.1
VMungo1309G0313 Vigna mungo HOM05D000036 ORTHO05D000095 1.8e-33 146.0 115 65.2
Psat1g138080 Pisum sativum HOM05D000036 ORTHO05D000095 3.1e-33 145.2 116 69.0
Thecc.09G068600 Theobroma cacao HOM05D000036 ORTHO05D000095 3.1e-33 145.2 115 70.4
Lalb_Chr11g0073921 Lupinus albus HOM05D000036 ORTHO05D000095 2.0e-32 142.5 116 66.4
Haze_26078 Corylus avellana HOM05D000036 ORTHO05D000095 4.5e-32 141.4 115 67.0
Lj2g0026499 Lotus japonicus HOM05D000036 ORTHO05D000095 1.0e-31 140.2 114 64.0
Duzib150G1657 Durio zibethinus HOM05D000036 ORTHO05D000095 2.2e-31 139.0 115 68.7
Duzib168G0583 Durio zibethinus HOM05D000036 ORTHO05D000095 1.9e-30 136.0 115 64.3
arahy.Tifrunner.gnm1.ann1.CJ5UHC Arachis hypogaea HOM05D000036 ORTHO05D000095 1.6e-29 132.9 127 64.6
arahy.Tifrunner.gnm1.ann1.HU828B Arachis hypogaea HOM05D000036 ORTHO05D000095 1.6e-29 132.9 127 64.6
Ciclev10007940m.g Citrus clementina HOM05D000036 ORTHO05D000095 1.6e-29 132.9 114 65.8
Cfa002931 Carpinus fangiana HOM05D000036 ORTHO05D000095 1.0e-28 130.2 119 62.2
Gohir.D13G195700 Gossypium hirsutum HOM05D000036 ORTHO05D000095 1.3e-28 129.8 116 64.7
Gorai.013G221800 Gossypium raimondii HOM05D000036 ORTHO05D000095 1.3e-28 129.8 116 64.7
Ciclev10007942m.g Citrus clementina HOM05D000036 ORTHO05D000095 1.8e-28 129.4 116 64.7
TPR.G12539 Trifolium pratense HOM05D000036 ORTHO05D000095 1.1e-27 126.7 117 62.4
FAN28G0649 Fragaria x ananassa HOM05D000036 ORTHO05D000095 1.5e-27 126.3 87 74.7
CiPaw.03G199500 Carya illinoinensis HOM05D000036 ORTHO05D000095 2.5e-27 125.6 114 60.5
FAN26G2514 Fragaria x ananassa HOM05D000036 ORTHO05D000095 5.7e-27 124.4 87 73.6
FvH4_1g09580 Fragaria vesca HOM05D000036 ORTHO05D000095 1.3e-26 123.2 85 74.1
RcHm_v2.0_Chr2g0096441 Rosa chinensis HOM05D000036 ORTHO05D000095 1.3e-26 123.2 85 74.1
Dinv25497 Davidia involucrata HOM05D000036 ORTHO05D000095 1.6e-26 122.9 79 75.9
Potri.006G134600 Populus trichocarpa HOM05D000036 ORTHO05D000095 2.1e-26 122.5 115 60.9
Actinidia33517 Actinidia chinensis HOM05D000036 ORTHO05D000095 2.8e-26 122.1 116 59.5
Prupe.7G190400 Prunus persica HOM05D000036 ORTHO05D000095 2.8e-26 122.1 122 60.7
Glyma.15G183800 Glycine max HOM05D000036 ORTHO05D000095 3.7e-26 121.7 112 59.8
Lj4g0007664 Lotus japonicus HOM05D000036 ORTHO05D000095 4.8e-26 121.3 116 60.3
MD02G1104500 Malus domestica HOM05D000036 ORTHO05D000095 4.8e-26 121.3 123 57.7
Actinidia39608 Actinidia chinensis HOM05D000036 ORTHO05D000095 6.3e-26 120.9 119 58.0
Aqoxy7G04186 Aquilegia oxysepala HOM05D000036 ORTHO05D000095 1.8e-25 119.4 108 60.2
Gohir.A06G084500 Gossypium hirsutum HOM05D000036 ORTHO05D000095 1.8e-25 119.4 116 57.8
Sabra06G0105700 Salix brachista HOM05D000036 ORTHO05D000095 2.4e-25 119.0 115 58.3
Atru.chr7.1792 Acer truncatum HOM05D000036 ORTHO05D000095 3.1e-25 118.6 118 60.2
CSS0036591 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000095 3.1e-25 118.6 84 69.0
Gorai.010G095000 Gossypium raimondii HOM05D000036 ORTHO05D000095 3.1e-25 118.6 116 57.8
MD15G1224800 Malus domestica HOM05D000036 ORTHO05D000095 3.1e-25 118.6 116 59.5
CANSAT56G1363 Cannabis sativa HOM05D000036 ORTHO05D000095 1.2e-24 116.7 121 59.5
Gohir.D06G081600 Gossypium hirsutum HOM05D000036 ORTHO05D000095 1.2e-24 116.7 116 56.9
CANSAT40G0002 Cannabis sativa HOM05D000036 ORTHO05D000095 2.0e-24 115.9 121 59.5
Nitab4.5_0004278g0010 Nicotiana tabacum HOM05D000036 ORTHO05D000095 3.4e-24 115.2 109 60.6
QL04p039044 Quercus lobata HOM05D000036 ORTHO05D000095 3.4e-24 115.2 121 58.7
Nn8g38512 Nelumbo nucifera HOM05D000036 ORTHO05D000095 5.9e-24 114.4 120 56.7
Manes.16G089200 Manihot esculenta HOM05D000036 ORTHO05D000095 1.3e-23 113.2 117 55.6
TWI32G0922 Tripterygium wilfordii HOM05D000036 ORTHO05D000095 1.7e-23 112.8 102 64.7
CAN.G1153.8 Capsicum annuum HOM05D000036 ORTHO05D000095 2.2e-23 112.5 109 58.7
PGSC0003DMG400013680 Solanum tuberosum HOM05D000036 ORTHO05D000095 2.2e-23 112.5 108 59.3
Cc00_g13740 Coffea canephora HOM05D000036 ORTHO05D000095 2.9e-23 112.1 117 54.7
Nitab4.5_0000905g0050 Nicotiana tabacum HOM05D000036 ORTHO05D000095 3.8e-23 111.7 118 59.3
arahy.Tifrunner.gnm1.ann1.5M8EAY Arachis hypogaea HOM05D000036 ORTHO05D000095 1.1e-22 110.2 114 57.9
arahy.Tifrunner.gnm1.ann1.G1MAHE Arachis hypogaea HOM05D000036 ORTHO05D000095 1.4e-22 109.8 115 55.7
Nn6g35735 Nelumbo nucifera HOM05D000036 ORTHO05D000095 1.4e-22 109.8 118 51.7
PGR142G2169 Punica granatum HOM05D000036 ORTHO05D000095 1.4e-22 109.8 109 56.0
CARHR118350 Cardamine hirsuta HOM05D000036 ORTHO05D000095 2.5e-22 109.0 115 56.5
Psat0s1781g0240 Pisum sativum HOM05D000036 ORTHO05D000095 4.2e-22 108.2 86 64.0
AT2G26440 Arabidopsis thaliana HOM05D000036 ORTHO05D000095 1.2e-21 106.7 115 57.4
Carub.0004s0634 Capsella rubella HOM05D000036 ORTHO05D000095 1.2e-21 106.7 93 62.4
vmacro17073 Vaccinium macrocarpon HOM05D000036 ORTHO05D000095 1.2e-21 106.7 114 58.8
Sopen05g027900 Solanum pennellii HOM05D000036 ORTHO05D000095 2.7e-21 105.5 120 53.3
Solyc05g047590.4 Solanum lycopersicum HOM05D000036 ORTHO05D000095 4.6e-21 104.8 86 61.6
Aa31LG5G9430 Aethionema arabicum HOM05D000036 ORTHO05D000095 6.1e-21 104.4 116 54.3
Sp4g07280 Schrenkiella parvula HOM05D000036 ORTHO05D000095 1.8e-20 102.8 108 56.5
Manes.02G011700 Manihot esculenta HOM05D000036 ORTHO05D000095 2.3e-20 102.4 109 56.0
Phvul.009G222500 Phaseolus vulgaris HOM05D000036 ORTHO05D000095 3.9e-20 101.7 117 52.1
PSO135G0513 Papaver somniferum HOM05D000036 ORTHO05D000095 6.7e-20 100.9 119 51.3
BcaB01g03022 Brassica carinata HOM05D000036 ORTHO05D000095 8.7e-20 100.5 105 54.3
Peaxi162Scf00954g00006 Petunia axillaris HOM05D000036 ORTHO05D000095 1.9e-19 99.4 104 53.8
C03p32290 Brassica napus HOM05D000036 ORTHO05D000095 2.5e-19 99.0 106 54.7
BolC3t15570H Brassica oleracea HOM05D000036 ORTHO05D000095 2.5e-19 99.0 106 54.7
BraA03t11903Z Brassica rapa HOM05D000036 ORTHO05D000095 3.3e-19 98.6 106 54.7
Hma1.2p1_0169F.1_g074480 Hydrangea macrophylla HOM05D000036 ORTHO05D000095 3.3e-19 98.6 114 50.0
SalBow6G5347 Salvia bowleyana HOM05D000036 ORTHO05D000095 3.3e-19 98.6 115 51.3
A03p26920 Brassica napus HOM05D000036 ORTHO05D000095 4.3e-19 98.2 106 54.7
QL04p039030 Quercus lobata HOM05D000036 ORTHO05D000095 4.3e-19 98.2 121 55.4
Hund08910 Selenicereus undatus HOM05D000036 ORTHO05D000095 4.3e-19 98.2 123 47.2
Lj4A922T53 Lonicera japonica HOM05D000036 ORTHO05D000095 7.4e-19 97.4 77 63.6
DCAR_024785 Daucus carota HOM05D000036 ORTHO05D000095 1.3e-18 96.7 110 55.5
THA.LOC104803700 Tarenaya hassleriana HOM05D000036 ORTHO05D000095 1.3e-18 96.7 116 49.1
Ah.14g084660 Amaranthus hybridus HOM05D000036 ORTHO05D000095 1.6e-18 96.3 83 54.2
Thhalv10011371m.g Eutrema salsugineum HOM05D000036 ORTHO05D000095 1.6e-18 96.3 108 54.6
PSO724G0969 Papaver somniferum HOM05D000036 ORTHO05D000095 1.6e-18 96.3 112 53.6
AL4G19190 Arabidopsis lyrata HOM05D000036 ORTHO05D000095 3.7e-18 95.1 70 70.0
Medtr4g124520 Medicago truncatula HOM05D000036 ORTHO05D000095 4.8e-18 94.7 86 60.5
Rhsim05G0001500 Rhododendron simsii HOM05D000036 ORTHO05D000095 6.3e-18 94.4 74 60.8
QL04p039040 Quercus lobata HOM05D000036 ORTHO05D000095 1.1e-17 93.6 116 54.3
unitig_749.g14188 Utricularia gibba HOM05D000036 ORTHO05D000095 1.5e-16 89.7 117 49.6
EL10Ac8g18957 Beta vulgaris HOM05D000036 ORTHO05D000095 2.0e-16 89.4 113 45.1
MSTRG.19422 Avicennia marina HOM05D000036 ORTHO05D000095 4.5e-16 88.2 114 45.6
Migut.J00873 Erythranthe guttata HOM05D000036 ORTHO05D000095 1.0e-15 87.0 117 49.6
unitig_26.g9119 Utricularia gibba HOM05D000036 ORTHO05D000095 1.0e-15 87.0 106 47.2
ATR0099G080 Amborella trichopoda HOM05D000036 ORTHO05D000095 1.3e-15 86.7 104 51.0
Phvul.003G126600 Phaseolus vulgaris HOM05D000036 ORTHO05D000095 1.3e-15 86.7 116 46.6
Oeu000273.1 Olea europaea HOM05D000036 ORTHO05D000095 2.9e-15 85.5 140 41.4
Peaxi162Scf00452g00005 Petunia axillaris HOM05D000036 ORTHO05D000095 3.8e-15 85.1 119 51.3
CDE07G0068 Ceratophyllum demersum HOM05D000036 ORTHO05D000095 5.0e-15 84.7 109 43.1
Glyma.13G115300 Glycine max HOM05D000036 ORTHO05D000095 7.2e-14 80.9 117 49.6
ATR0099G096 Amborella trichopoda HOM05D000036 ORTHO05D000095 3.6e-13 78.6 112 46.4
VMungo1215G1858 Vigna mungo HOM05D000036 ORTHO05D000095 1.0e-12 77.0 110 45.5
QL11p003371 Quercus lobata HOM05D000036 ORTHO05D000095 1.1e-11 73.6 78 56.4
HPP92_004338 Vanilla planifolia HOM05D000036 ORTHO05D000095 3.7e-10 68.6 113 43.4
Lsat_1_v5_gn_5_138221 Lactuca sativa HOM05D000036 ORTHO05D000095 4.8e-10 68.2 97 44.3
QL04p039098 Quercus lobata HOM05D000036 ORTHO05D000095 6.3e-10 67.8 84 48.8
HanXRQChr10g0319831 Helianthus annuus HOM05D000036 ORTHO05D000095 1.2e-08 63.5 115 41.7
QL04p039116 Quercus lobata HOM05D000036 ORTHO05D337729 5.0e-07 58.2 124 37.9
Sc18g0002890 Simmondsia chinensis HOM05D000036 ORTHO05D000095 5.0e-07 58.2 106 36.8
MSTRG.14139 Avicennia marina HOM05D000036 ORTHO05D000095 7.2e-06 54.3 65 49.2


User provided reference genes

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