Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22051 Trifolium pratense HOM05D000260 ORTHO05D003500 2.1e-49 198.7 102 100.0
Ca_08086_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 1.1e-29 133.3 117 65.8
Psat3g098040 Pisum sativum HOM05D000260 ORTHO05D000318 1.0e-27 126.7 104 75.0
Medtr7g082530 Medicago truncatula HOM05D000260 ORTHO05D000318 6.1e-25 117.5 107 65.4
Lj1g0010679 Lotus japonicus HOM05D000260 ORTHO05D000318 1.4e-21 106.3 104 58.7
Lalb_Chr10g0091381 Lupinus albus HOM05D000260 ORTHO05D000318 1.2e-20 103.2 105 59.0
Phvul.008G007900 Phaseolus vulgaris HOM05D000260 ORTHO05D000318 4.5e-20 101.3 102 62.7
TPR.G36593 Trifolium pratense HOM05D000260 ORTHO05D000318 2.3e-19 99.0 66 86.4
VMungo1383G2523 Vigna mungo HOM05D000260 ORTHO05D000318 2.9e-19 98.6 101 57.4
VMungo1383G0920 Vigna mungo HOM05D000260 ORTHO05D000318 2.8e-17 92.0 102 57.8
Lalb_Chr04g0257601 Lupinus albus HOM05D000260 ORTHO05D000318 2.3e-16 89.0 105 58.1
Glyma.02G088700 Glycine max HOM05D000260 ORTHO05D000318 3.0e-16 88.6 103 53.4
Glyma.18G294800 Glycine max HOM05D000260 ORTHO05D000318 3.4e-15 85.1 102 51.0
Duzib138G0276 Durio zibethinus HOM05D000260 ORTHO05D000318 9.8e-15 83.6 94 53.2
arahy.Tifrunner.gnm1.ann1.2H5638 Arachis hypogaea HOM05D000260 ORTHO05D000318 1.4e-13 79.7 100 49.0
arahy.Tifrunner.gnm1.ann1.MFIY4C Arachis hypogaea HOM05D000260 ORTHO05D000318 1.4e-13 79.7 100 49.0
Haze_14182 Corylus avellana HOM05D000260 ORTHO05D000318 1.7e-11 72.8 102 45.1
HanXRQChr11g0325081 Helianthus annuus HOM05D000260 ORTHO05D000318 2.3e-11 72.4 109 41.3
QL02p050597 Quercus lobata HOM05D000260 ORTHO05D000318 2.3e-11 72.4 103 45.6
ClCG07G014760 Citrullus lanatus HOM05D000260 ORTHO05D000318 5.0e-11 71.2 102 49.0
TWI77G0678 Tripterygium wilfordii HOM05D000260 ORTHO05D000318 6.6e-11 70.9 90 54.4
Thecc.04G129700 Theobroma cacao HOM05D000260 ORTHO05D000318 8.6e-11 70.5 104 47.1
Gorai.008G056600 Gossypium raimondii HOM05D000260 ORTHO05D000318 3.3e-10 68.6 102 41.2
CsaV3_4G028840 Cucumis sativus L. HOM05D000260 ORTHO05D000318 4.3e-10 68.2 103 44.7
Gohir.D12G053400 Gossypium hirsutum HOM05D000260 ORTHO05D000318 5.6e-10 67.8 102 41.2
MD00G1204100 Malus domestica HOM05D000260 ORTHO05D000318 7.3e-10 67.4 107 43.0
Hund13704 Selenicereus undatus HOM05D000260 ORTHO05D000318 7.3e-10 67.4 114 46.5
Sc11g0008460 Simmondsia chinensis HOM05D000260 ORTHO05D000318 7.3e-10 67.4 116 41.4
CiPaw.03G063600 Carya illinoinensis HOM05D000260 ORTHO05D000318 1.6e-09 66.2 95 45.3
GSVIVG01030992001 Vitis vinifera HOM05D000260 ORTHO05D000318 1.6e-09 66.2 91 48.4
CSS0016791 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 2.1e-09 65.9 95 52.6
Duzib133G1450 Durio zibethinus HOM05D000260 ORTHO05D000318 2.1e-09 65.9 105 46.7
Cfa007899 Carpinus fangiana HOM05D000260 ORTHO05D000318 2.8e-09 65.5 103 43.7
Dinv34801 Davidia involucrata HOM05D003134 ORTHO05D003500 2.8e-09 65.5 104 48.1
Hund16172 Selenicereus undatus HOM05D000260 ORTHO05D000318 6.2e-09 64.3 114 38.6
Sc06g0006900 Simmondsia chinensis HOM05D000260 ORTHO05D000318 6.2e-09 64.3 117 43.6
MELO3C010403.2 Cucumis melo HOM05D000260 ORTHO05D000318 8.0e-09 63.9 104 44.2
Lj4A190G73 Lonicera japonica HOM05D000260 ORTHO05D000318 8.0e-09 63.9 100 46.0
Aa31LG9G17180 Aethionema arabicum HOM05D000260 ORTHO05D000318 1.1e-08 63.5 105 45.7
MSTRG.23593 Avicennia marina HOM05D000260 ORTHO05D000318 1.4e-08 63.2 104 44.2
CSS0049750 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 1.4e-08 63.2 73 54.8
Gohir.A11G165500 Gossypium hirsutum HOM05D000260 ORTHO05D000318 1.4e-08 63.2 96 50.0
Gohir.A12G054600 Gossypium hirsutum HOM05D000260 ORTHO05D000318 1.4e-08 63.2 102 40.2
Gorai.007G183600 Gossypium raimondii HOM05D000260 ORTHO05D000318 1.4e-08 63.2 89 51.7
RcHm_v2.0_Chr6g0273041 Rosa chinensis HOM05D000260 ORTHO05D000318 2.3e-08 62.4 105 46.7
Gohir.D11G171500 Gossypium hirsutum HOM05D000260 ORTHO05D000318 3.1e-08 62.0 89 51.7
Manes.02G070600 Manihot esculenta HOM05D000260 ORTHO05D000318 4.0e-08 61.6 74 51.4
Oeu036852.1 Olea europaea HOM05D000260 ORTHO05D000318 4.0e-08 61.6 105 46.7
ECA232G1450 Erigeron canadensis HOM05D002670 ORTHO05D000318 5.2e-08 61.2 104 37.5
Potri.017G118100 Populus trichocarpa HOM05D000260 ORTHO05D000318 5.2e-08 61.2 105 43.8
Hma1.2p1_0075F.1_g039260 Hydrangea macrophylla HOM05D000260 ORTHO05D000318 6.8e-08 60.8 110 45.5
Hma1.2p1_0976F.1_g243296 Hydrangea macrophylla HOM05D000260 ORTHO05D000318 6.8e-08 60.8 110 45.5
Manes.01G112300 Manihot esculenta HOM05D000260 ORTHO05D000318 6.8e-08 60.8 75 49.3
SalBow3G2949 Salvia bowleyana HOM05D000260 ORTHO05D000318 6.8e-08 60.8 109 44.0
BcaB01g01604 Brassica carinata HOM05D000260 ORTHO05D000318 8.9e-08 60.5 95 43.2
Hma1.2p1_0075F.1_g039270 Hydrangea macrophylla HOM05D000260 ORTHO05D000318 8.9e-08 60.5 102 46.1
Hma1.2p1_0976F.1_g243299 Hydrangea macrophylla HOM05D000260 ORTHO05D000318 8.9e-08 60.5 102 46.1
Oeu050383.1 Olea europaea HOM05D000260 ORTHO05D000318 1.5e-07 59.7 105 49.5
Ah.16g101640 Amaranthus hybridus HOM05D000260 ORTHO05D000318 2.0e-07 59.3 113 44.2
Sabra04G0065500 Salix brachista HOM05D000260 ORTHO05D000318 2.0e-07 59.3 105 41.0
Sed0018509 Sechium edule HOM05D000260 ORTHO05D000318 2.0e-07 59.3 102 46.1
Actinidia17643 Actinidia chinensis HOM05D000260 ORTHO05D000318 2.6e-07 58.9 106 44.3
BcaB03g15225 Brassica carinata HOM05D000260 ORTHO05D000318 2.6e-07 58.9 111 38.7
PGR004G2255 Punica granatum HOM05D000260 ORTHO05D000318 2.6e-07 58.9 111 44.1
BolC9t56390H Brassica oleracea HOM05D000260 ORTHO05D000318 3.4e-07 58.5 95 40.0
BraA09t38368Z Brassica rapa HOM05D000260 ORTHO05D000318 3.4e-07 58.5 95 38.9
FAN20G1929 Fragaria x ananassa HOM05D000260 ORTHO05D000318 3.4e-07 58.5 105 40.0
Actinidia36337 Actinidia chinensis HOM05D000260 ORTHO05D000318 4.4e-07 58.2 70 50.0
C09p35510 Brassica napus HOM05D000260 ORTHO05D000318 4.4e-07 58.2 97 40.2
COL.COLO4_09361 Corchorus olitorius HOM05D000260 ORTHO05D000318 4.4e-07 58.2 72 51.4
Thhalv10018045m.g Eutrema salsugineum HOM05D000260 ORTHO05D000318 4.4e-07 58.2 106 38.7
FvH4_2g12540 Fragaria vesca HOM05D000260 ORTHO05D000318 4.4e-07 58.2 79 44.3
Sed0015097 Sechium edule HOM05D000260 ORTHO05D000318 4.4e-07 58.2 97 46.4
CANSAT78G1831 Cannabis sativa HOM05D000260 ORTHO05D000318 5.8e-07 57.8 94 43.6
FAN15G3700 Fragaria x ananassa HOM05D000260 ORTHO05D000318 5.8e-07 57.8 105 40.0
FAN24G2351 Fragaria x ananassa HOM05D000260 ORTHO05D000318 7.5e-07 57.4 105 40.0
MD17G1247800 Malus domestica HOM05D000260 ORTHO05D000318 7.5e-07 57.4 98 39.8
vmacro05532 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 7.5e-07 57.4 98 41.8
TWI74G0852 Tripterygium wilfordii HOM05D000260 ORTHO05D000318 9.8e-07 57.0 61 60.7
MSTRG.3542 Avicennia marina HOM05D000260 ORTHO05D000318 1.3e-06 56.6 94 41.5
A09p28010 Brassica napus HOM05D000260 ORTHO05D000318 1.3e-06 56.6 95 40.0
AUR62009020 Chenopodium quinoa HOM05D000260 ORTHO05D000318 1.3e-06 56.6 112 38.4
Atru.chr1.1629 Acer truncatum HOM05D000260 ORTHO05D000318 1.7e-06 56.2 95 41.1
A07p33670 Brassica napus HOM05D000260 ORTHO05D000318 1.7e-06 56.2 108 40.7
Eucgr.J01515 Eucalyptus grandis HOM05D000260 ORTHO05D000318 1.7e-06 56.2 86 45.3
THA.LOC104823850 Tarenaya hassleriana HOM05D000260 ORTHO05D000318 1.7e-06 56.2 95 45.3
BolC6t39109H Brassica oleracea HOM05D000260 ORTHO05D000318 2.2e-06 55.8 106 43.4
Carub.0002s1310 Capsella rubella HOM05D000260 ORTHO05D000318 2.2e-06 55.8 97 42.3
Migut.H00234 Erythranthe guttata HOM05D000260 ORTHO05D000318 2.2e-06 55.8 105 41.9
Prupe.3G146500 Prunus persica HOM05D000260 ORTHO05D000318 2.2e-06 55.8 100 41.0
Sabra17G0097200 Salix brachista HOM05D000260 ORTHO05D000318 2.2e-06 55.8 93 44.1
AT1G66880 Arabidopsis thaliana HOM05D000260 ORTHO05D000318 3.7e-06 55.1 110 40.0
BcaC02g09634 Brassica carinata HOM05D000260 ORTHO05D000318 3.7e-06 55.1 98 45.9
A02p13800 Brassica napus HOM05D000260 ORTHO05D000318 3.7e-06 55.1 100 38.0
BolC4t26071H Brassica oleracea HOM05D000260 ORTHO05D000318 3.7e-06 55.1 98 45.9
FAN27G2036 Fragaria x ananassa HOM05D000260 ORTHO05D000318 3.7e-06 55.1 98 39.8
A04p11220 Brassica napus HOM05D002670 ORTHO05D003079 4.9e-06 54.7 99 44.4
HanXRQChr11g0325091 Helianthus annuus HOM05D000260 ORTHO05D000318 4.9e-06 54.7 124 34.7
QL02p049624 Quercus lobata HOM05D000260 ORTHO05D000318 4.9e-06 54.7 107 40.2
MELO3C008149.2 Cucumis melo HOM05D000260 ORTHO05D000318 6.4e-06 54.3 105 40.0
Nitab4.5_0000753g0150 Nicotiana tabacum HOM05D000260 ORTHO05D000318 6.4e-06 54.3 111 41.4
Rhsim10G0069600 Rhododendron simsii HOM05D000260 ORTHO05D000318 6.4e-06 54.3 103 43.7
C04p44920 Brassica napus HOM05D002670 ORTHO05D003079 8.3e-06 53.9 98 45.9
Sp5g21870 Schrenkiella parvula HOM05D000260 ORTHO05D000318 8.3e-06 53.9 99 42.4


User provided reference genes

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