Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22013 Trifolium pratense HOM05D003598 ORTHO05D410490 5.5e-147 524.2 257 100.0
TPR.G20575 Trifolium pratense HOM05D003598 ORTHO05D004198 1.8e-36 157.1 92 83.7
Phvul.L003737 Phaseolus vulgaris HOM05D003598 ORTHO05D004198 3.1e-17 93.2 215 36.3
Glyma.12G141400 Glycine max HOM05D003598 ORTHO05D004198 5.3e-17 92.4 223 34.5
Glyma.11G103000 Glycine max HOM05D003598 ORTHO05D004198 1.3e-15 87.8 222 33.8
Ca_03027_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 3.8e-15 86.3 225 32.9
Lj3g0003654 Lotus japonicus HOM05D003598 ORTHO05D004198 3.8e-15 86.3 224 33.0
VMungo1127G1291 Vigna mungo HOM05D003598 ORTHO05D004198 1.9e-14 84.0 201 35.8
arahy.Tifrunner.gnm1.ann1.Y4R7AD Arachis hypogaea HOM05D003598 ORTHO05D004198 2.5e-14 83.6 225 30.7
Lalb_Chr03g0024851 Lupinus albus HOM05D003598 ORTHO05D004198 4.2e-14 82.8 222 33.3
arahy.Tifrunner.gnm1.ann1.01A9SY Arachis hypogaea HOM05D003598 ORTHO05D004198 7.2e-14 82.0 225 29.8
TPR.G32324 Trifolium pratense HOM05D003598 ORTHO05D004198 1.6e-13 80.9 218 32.1
Psat7g173800 Pisum sativum HOM05D003598 ORTHO05D004198 7.9e-13 78.6 217 31.3
Medtr4g108000 Medicago truncatula HOM05D003598 ORTHO05D004198 1.0e-12 78.2 220 32.3
Medtr4g074480 Medicago truncatula HOM05D003598 ORTHO05D004198 1.8e-12 77.4 217 31.3
Ca_14027_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 5.7e-11 72.4 240 30.0
CANSAT64G1690 Cannabis sativa HOM05D003598 ORTHO05D004198 1.7e-10 70.9 234 31.2
Actinidia11173 Actinidia chinensis HOM05D003598 ORTHO05D004198 2.8e-10 70.1 226 31.4
CiPaw.07G157700 Carya illinoinensis HOM05D003598 ORTHO05D004198 6.3e-10 68.9 216 29.6
PSO782G0946 Papaver somniferum HOM05D003598 ORTHO05D004198 2.4e-09 67.0 229 29.3
MBI03_g24013_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 3.1e-09 66.6 201 32.3
CiPaw.08G060100 Carya illinoinensis HOM05D003598 ORTHO05D004198 5.3e-09 65.9 218 28.4
Dinv05241 Davidia involucrata HOM05D003598 ORTHO05D004198 9.1e-09 65.1 233 30.0
Sc10g0007060 Simmondsia chinensis HOM05D003598 ORTHO05D004198 2.0e-08 63.9 229 28.8
vmacro09196 Vaccinium macrocarpon HOM05D003598 ORTHO05D004198 2.0e-08 63.9 220 30.9
TWI77G0411 Tripterygium wilfordii HOM05D003598 ORTHO05D004198 2.6e-08 63.5 227 30.0
PSO063G0008 Papaver somniferum HOM05D003598 ORTHO05D004198 3.5e-08 63.2 229 27.9
TWI53G1744 Tripterygium wilfordii HOM05D003598 ORTHO05D004198 1.0e-07 61.6 228 28.5
TAR371G1198 Trochodendron aralioides HOM05D003598 ORTHO05D004198 1.3e-07 61.2 237 29.1
Hma1.2p1_0218F.1_g092550 Hydrangea macrophylla HOM05D003598 ORTHO05D004198 1.7e-07 60.8 187 33.2
Solyc03g119420.3 Solanum lycopersicum HOM05D003598 ORTHO05D004198 2.2e-07 60.5 148 33.1
Manes.01G073300 Manihot esculenta HOM05D003598 ORTHO05D004198 2.9e-07 60.1 225 27.1
Nn4g24926 Nelumbo nucifera HOM05D003598 ORTHO05D004198 2.9e-07 60.1 237 27.4
Rhsim06G0126100 Rhododendron simsii HOM05D003598 ORTHO05D004198 3.8e-07 59.7 238 28.2
Aqoxy3G01046 Aquilegia oxysepala HOM05D003598 ORTHO05D004198 5.0e-07 59.3 228 28.9
Haze_22545 Corylus avellana HOM05D003598 ORTHO05D004198 5.0e-07 59.3 236 26.7
Potri.005G198900 Populus trichocarpa HOM05D003598 ORTHO05D004198 5.0e-07 59.3 226 26.5
Solyc08g075730.3 Solanum lycopersicum HOM05D003598 ORTHO05D004198 6.5e-07 58.9 148 31.8
Sopen08g024380 Solanum pennellii HOM05D003598 ORTHO05D004198 6.5e-07 58.9 148 31.8
CSS0032311 Camellia sinensis var. sinensis HOM05D003598 ORTHO05D004198 8.5e-07 58.5 69 44.9
Peaxi162Scf00193g00013 Petunia axillaris HOM05D003598 ORTHO05D004198 8.5e-07 58.5 148 33.1
Potri.002G062200 Populus trichocarpa HOM05D003598 ORTHO05D004198 8.5e-07 58.5 197 28.4
Sopen03g038270 Solanum pennellii HOM05D003598 ORTHO05D004198 8.5e-07 58.5 148 31.8
PGSC0003DMG400005723 Solanum tuberosum HOM05D003598 ORTHO05D004198 8.5e-07 58.5 148 31.8
MELO3C024034.2 Cucumis melo HOM05D003598 ORTHO05D004198 1.1e-06 58.2 74 47.3
FvH4_4g36731 Fragaria vesca HOM05D003598 ORTHO05D004198 1.1e-06 58.2 61 57.4
FAN12G0530 Fragaria x ananassa HOM05D003778 ORTHO05D004418 1.1e-06 58.2 74 51.4
MD16G1000500 Malus domestica HOM05D003598 ORTHO05D004198 1.1e-06 58.2 240 28.3
CAN.G1425.3 Capsicum annuum HOM05D003598 ORTHO05D004198 1.5e-06 57.8 148 32.4
FAN17G2175 Fragaria x ananassa HOM05D003778 ORTHO05D004418 1.5e-06 57.8 235 29.8
Nitab4.5_0001659g0130 Nicotiana tabacum HOM05D003598 ORTHO05D004198 1.5e-06 57.8 148 32.4
FAN07G1289 Fragaria x ananassa HOM05D003778 ORTHO05D004418 1.9e-06 57.4 54 59.3
MD13G1007600 Malus domestica HOM05D003598 ORTHO05D004198 1.9e-06 57.4 107 40.2
Oeu042207.1 Olea europaea HOM05D003598 ORTHO05D004198 1.9e-06 57.4 47 63.8
Oeu045722.3 Olea europaea HOM05D003598 ORTHO05D004198 1.9e-06 57.4 47 63.8
Atru.chr9.2066 Acer truncatum HOM05D003598 ORTHO05D004198 3.2e-06 56.6 227 27.3
DCAR_002566 Daucus carota HOM05D003598 ORTHO05D004198 3.2e-06 56.6 253 27.7
Prupe.8G036300 Prunus persica HOM05D003598 ORTHO05D004198 3.2e-06 56.6 53 60.4
QL02p009504 Quercus lobata HOM05D003598 ORTHO05D004198 4.2e-06 56.2 235 25.1
PGSC0003DMG400030870 Solanum tuberosum HOM05D003598 ORTHO05D004198 4.2e-06 56.2 148 31.1
vmacro12412 Vaccinium macrocarpon HOM05D003598 ORTHO05D004198 4.2e-06 56.2 47 61.7
CDE05G0161 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 5.5e-06 55.8 199 29.6
Prupe.1G345400 Prunus persica HOM05D003598 ORTHO05D004198 5.5e-06 55.8 236 28.0
PGR042G0762 Punica granatum HOM05D003598 ORTHO05D004198 5.5e-06 55.8 47 61.7
Sed0014776 Sechium edule HOM05D003598 ORTHO05D004198 5.5e-06 55.8 66 50.0
Sed0024830 Sechium edule HOM05D003598 ORTHO05D004198 5.5e-06 55.8 236 26.7
Sc06g0004000 Simmondsia chinensis HOM05D003598 ORTHO05D004198 5.5e-06 55.8 238 27.7
SGA_v2.0_scaffold277G46719 Striga asiatica HOM05D003598 ORTHO05D004198 5.5e-06 55.8 66 48.5
Dinv32105 Davidia involucrata HOM05D003598 ORTHO05D004198 7.2e-06 55.5 235 27.7
HanXRQChr03g0086691 Helianthus annuus HOM05D003598 ORTHO05D004198 7.2e-06 55.5 215 31.2
RcHm_v2.0_Chr4g0446451 Rosa chinensis HOM05D003598 ORTHO05D004198 7.2e-06 55.5 234 27.8
Cfa013868 Carpinus fangiana HOM05D003598 ORTHO05D004198 9.4e-06 55.1 236 26.3
Cc00_g17080 Coffea canephora HOM05D003598 ORTHO05D004198 9.4e-06 55.1 213 27.7
RcHm_v2.0_Chr3g0449691 Rosa chinensis HOM05D003598 ORTHO05D004198 9.4e-06 55.1 74 50.0
GSVIVG01010181001 Vitis vinifera HOM05D003598 ORTHO05D004198 9.4e-06 55.1 227 30.4


User provided reference genes

Program Settings