Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22001 Trifolium pratense HOM05D009013 ORTHO05D009761 1.7e-134 483.0 318 100.0
Medtr2g049330 Medicago truncatula HOM05D009013 ORTHO05D009761 1.5e-58 230.7 297 56.9
Psat1g020440 Pisum sativum HOM05D009013 ORTHO05D009761 1.0e-54 218.0 437 40.5
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 7.7e-50 201.8 343 46.6
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 6.5e-49 198.7 307 46.3
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 4.8e-44 182.6 332 44.0
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 1.4e-43 181.0 304 46.1
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 6.5e-41 172.2 307 41.7
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 9.1e-35 151.8 310 40.3
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 1.6e-34 151.0 314 41.1
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 2.0e-34 150.6 306 42.2
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 2.7e-34 150.2 314 40.1
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 5.9e-34 149.1 316 38.6
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 1.0e-33 148.3 312 38.8
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.5e-29 134.4 293 38.2
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 2.6e-29 133.7 263 43.0
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 2.2e-28 130.6 296 38.9
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 4.5e-26 122.9 309 36.2
arahy.Tifrunner.gnm1.ann1.5V604V Arachis hypogaea HOM05D009013 ORTHO05D009761 2.9e-25 120.2 311 36.3
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 2.1e-23 114.0 314 35.7
TPR.G31355 Trifolium pratense HOM05D009013 ORTHO05D009761 2.6e-21 107.1 258 37.2
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 4.1e-19 99.8 335 30.1
Psat1g018200 Pisum sativum HOM05D009013 ORTHO05D009761 2.0e-18 97.4 288 33.3
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 3.5e-18 96.7 329 29.8
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 4.7e-15 86.3 341 32.0
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 6.2e-15 85.9 290 29.7
Medtr6g068870 Medicago truncatula HOM05D009013 ORTHO05D009761 8.9e-14 82.0 240 33.8
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 1.2e-13 81.6 306 28.4
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 4.4e-13 79.7 333 30.9
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 5.8e-13 79.3 325 28.9
Ca_25278_v3 Cicer arietinum L. HOM05D009013 ORTHO05D009761 2.2e-12 77.4 290 30.0
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 4.9e-12 76.3 349 29.2
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 4.9e-12 76.3 52 71.2
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 8.3e-12 75.5 313 28.1
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 1.1e-11 75.1 119 39.5
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 2.3e-09 67.4 102 41.2
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.5e-08 64.7 99 39.4
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 2.5e-08 63.9 99 39.4
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 2.5e-08 63.9 329 27.1
FAN25G1841 Fragaria x ananassa HOM05D014736 ORTHO05D009761 3.3e-08 63.5 99 38.4
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 7.3e-08 62.4 260 26.2
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 7.3e-08 62.4 275 24.4
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 2.8e-07 60.5 335 26.6
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 1.4e-06 58.2 306 27.5
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.8e-06 57.8 102 39.2
DCAR_027956 Daucus carota HOM05D014645 ORTHO05D009761 8.9e-06 55.5 120 30.8


User provided reference genes

Program Settings