Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 1.8e-34 149.1 94 100.0
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 2.1e-32 142.1 94 89.4
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 8.2e-24 113.6 94 71.3
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 8.2e-24 113.6 94 70.2
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 4.0e-23 111.3 95 81.1
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 3.4e-22 108.2 95 70.5
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 7.6e-22 107.1 94 67.0
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 7.6e-22 107.1 94 67.0
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 1.0e-21 106.7 94 69.1
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 2.2e-21 105.5 95 67.4
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 1.2e-19 99.8 94 66.0
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 4.6e-19 97.8 94 64.9
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 7.9e-19 97.1 94 64.9
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 8.7e-18 93.6 94 70.2
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 2.2e-16 89.0 95 71.6
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 3.1e-15 85.1 96 67.7
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 3.4e-14 81.6 103 55.3
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 4.5e-14 81.3 53 81.1
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 4.5e-14 81.3 53 81.1
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 4.5e-14 81.3 89 49.4
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 1.3e-13 79.7 53 79.2
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 2.9e-13 78.6 53 77.4
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 8.5e-13 77.0 89 48.3
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 3.2e-12 75.1 89 56.2
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 5.5e-12 74.3 96 52.1
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 9.4e-12 73.6 89 55.1
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 9.4e-12 73.6 89 55.1
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.1e-11 72.4 89 55.1
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.1e-11 72.4 89 55.1
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 6.1e-11 70.9 89 49.4
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 6.1e-11 70.9 90 50.0
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 7.9e-11 70.5 92 47.8
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 7.9e-11 70.5 89 60.7
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 7.9e-11 70.5 89 50.6
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 1.0e-10 70.1 95 48.4
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.0e-10 70.1 97 49.5
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.4e-10 69.7 89 57.3
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 2.3e-10 68.9 95 47.4
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 2.3e-10 68.9 89 48.3
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 3.0e-10 68.6 97 44.3
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 3.0e-10 68.6 93 51.6
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 3.9e-10 68.2 94 41.5
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 5.1e-10 67.8 93 54.8
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 5.1e-10 67.8 96 45.8
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 6.7e-10 67.4 84 46.4
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 8.8e-10 67.0 58 58.6
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 1.1e-09 66.6 95 54.7
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 1.1e-09 66.6 82 47.6
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 2.0e-09 65.9 94 43.6
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 2.0e-09 65.9 95 41.1
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 2.5e-09 65.5 99 48.5
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 5.7e-09 64.3 98 54.1
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 7.4e-09 63.9 93 44.1
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 7.4e-09 63.9 94 41.5
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 9.7e-09 63.5 94 42.6
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 9.7e-09 63.5 93 44.1
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 1.3e-08 63.2 106 53.8
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 1.7e-08 62.8 108 54.6
ClCG03G006550 Citrullus lanatus HOM05D006325 ORTHO05D007878 1.7e-08 62.8 83 42.2
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 2.2e-08 62.4 94 40.4
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 2.2e-08 62.4 60 60.0
COL.COLO4_31021 Corchorus olitorius HOM05D006325 ORTHO05D007878 2.8e-08 62.0 91 54.9
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 2.8e-08 62.0 58 62.1
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 3.7e-08 61.6 56 60.7
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 4.8e-08 61.2 86 58.1
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 4.8e-08 61.2 56 57.1
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 4.8e-08 61.2 54 59.3
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 6.3e-08 60.8 95 54.7
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 6.3e-08 60.8 96 40.6
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 6.3e-08 60.8 54 57.4
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 8.2e-08 60.5 87 49.4
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 1.1e-07 60.1 103 55.3
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.1e-07 60.1 60 56.7
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 1.4e-07 59.7 59 54.2
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 1.4e-07 59.7 58 58.6
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 1.4e-07 59.7 94 54.3
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 1.4e-07 59.7 94 53.2
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 1.8e-07 59.3 89 40.4
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 1.8e-07 59.3 87 54.0
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 2.4e-07 58.9 54 55.6
Manes.15G124400 Manihot esculenta HOM05D006325 ORTHO05D007878 3.1e-07 58.5 61 50.8
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 4.1e-07 58.2 89 42.7
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 5.3e-07 57.8 58 58.6
Gohir.A06G139600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 5.3e-07 57.8 56 55.4
Gohir.A10G043400 Gossypium hirsutum HOM05D006325 ORTHO05D007878 6.9e-07 57.4 59 49.2
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 6.9e-07 57.4 47 57.4
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 6.9e-07 57.4 87 55.2
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 9.1e-07 57.0 59 54.2
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 9.1e-07 57.0 58 53.4
Gohir.D06G144350 Gossypium hirsutum HOM05D006325 ORTHO05D007878 9.1e-07 57.0 56 55.4
Gorai.010G168000 Gossypium raimondii HOM05D006325 ORTHO05D007878 9.1e-07 57.0 56 55.4
Medtr4g083130 Medicago truncatula HOM05D006325 ORTHO05D007878 9.1e-07 57.0 94 54.3
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 1.2e-06 56.6 53 56.6
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 1.2e-06 56.6 59 52.5
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 1.2e-06 56.6 61 57.4
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 1.2e-06 56.6 83 39.8
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 1.5e-06 56.2 49 59.2
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 2.0e-06 55.8 43 65.1
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 2.0e-06 55.8 49 59.2
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 2.0e-06 55.8 49 59.2
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 2.0e-06 55.8 49 59.2
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 2.0e-06 55.8 49 59.2
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 2.0e-06 55.8 58 55.2
Sed0022207 Sechium edule HOM05D006325 ORTHO05D007878 2.0e-06 55.8 90 41.1
CsaV3_1G036810 Cucumis sativus L. HOM05D006325 ORTHO05D007878 2.6e-06 55.5 83 39.8
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 2.6e-06 55.5 55 56.4
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 3.4e-06 55.1 59 54.2
Gohir.D10G044600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 3.4e-06 55.1 55 50.9
Gorai.011G047600 Gossypium raimondii HOM05D006325 ORTHO05D007878 3.4e-06 55.1 55 50.9
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 4.5e-06 54.7 67 52.2
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 5.9e-06 54.3 94 36.2
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 5.9e-06 54.3 37 67.6
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 7.7e-06 53.9 47 61.7
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 7.7e-06 53.9 94 48.9


User provided reference genes

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