Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21906 Trifolium pratense HOM05D000453 ORTHO05D000387 1.3e-76 290.0 187 100.0
Medtr3g078380 Medicago truncatula HOM05D000453 ORTHO05D000387 1.5e-37 160.2 142 68.3
Ca_27491_v3 Cicer arietinum L. HOM05D000453 ORTHO05D000387 2.3e-33 146.4 140 69.3
Glyma.04G178800 Glycine max HOM05D000453 ORTHO05D000387 9.5e-24 114.4 144 59.0
Lj1g0000371 Lotus japonicus HOM05D000453 ORTHO05D000387 2.8e-23 112.8 138 62.3
VMungo1309G1244 Vigna mungo HOM05D000453 ORTHO05D000387 3.6e-23 112.5 130 56.2
Glyma.06G185900 Glycine max HOM05D000453 ORTHO05D000387 1.1e-22 110.9 143 55.9
Lalb_Chr12g0201371 Lupinus albus HOM05D000453 ORTHO05D000387 7.5e-21 104.8 138 52.2
Phvul.009G182000 Phaseolus vulgaris HOM05D000453 ORTHO05D000387 4.9e-20 102.1 122 55.7
Lj4g0006234 Lotus japonicus HOM05D000453 ORTHO05D000387 2.7e-18 96.3 141 44.0
Glyma.05G033700 Glycine max HOM05D000453 ORTHO05D000387 3.9e-17 92.4 128 45.3
arahy.Tifrunner.gnm1.ann1.C0LV86 Arachis hypogaea HOM05D000453 ORTHO05D000387 5.1e-17 92.0 143 46.9
Lalb_Chr08g0236291 Lupinus albus HOM05D000453 ORTHO05D000387 5.1e-17 92.0 147 49.0
Cc04_g13580 Coffea canephora HOM05D000453 ORTHO05D000387 6.6e-17 91.7 157 41.4
Phvul.003G196900 Phaseolus vulgaris HOM05D000453 ORTHO05D000387 6.6e-17 91.7 115 47.8
VMungo1215G0802 Vigna mungo HOM05D000453 ORTHO05D000387 1.1e-16 90.9 115 51.3
arahy.Tifrunner.gnm1.ann1.820J93 Arachis hypogaea HOM05D000453 ORTHO05D000387 2.5e-16 89.7 143 46.2
QL10p012364 Quercus lobata HOM05D000453 ORTHO05D000387 3.3e-16 89.4 141 45.4
Dinv20698 Davidia involucrata HOM05D000453 ORTHO05D000387 1.2e-15 87.4 147 52.4
Glyma.17G093400 Glycine max HOM05D000453 ORTHO05D000387 1.6e-15 87.0 145 50.3
Psat5g112560 Pisum sativum HOM05D000453 ORTHO05D000387 8.1e-15 84.7 73 67.1
arahy.Tifrunner.gnm1.ann1.2DS66L Arachis hypogaea HOM05D000453 ORTHO05D000387 1.1e-14 84.3 78 60.3
arahy.Tifrunner.gnm1.ann1.4KG7L9 Arachis hypogaea HOM05D000453 ORTHO05D000387 2.3e-14 83.2 81 58.0
Dinv09181 Davidia involucrata HOM05D000453 ORTHO05D000387 2.3e-14 83.2 146 43.2
Peaxi162Scf00017g00257 Petunia axillaris HOM05D000453 ORTHO05D000387 3.1e-14 82.8 136 45.6
Thecc.03G004400 Theobroma cacao HOM05D000453 ORTHO05D000387 4.0e-14 82.4 141 43.3
Sopen03g032900 Solanum pennellii HOM05D000453 ORTHO05D000387 5.2e-14 82.0 131 43.5
Hma1.2p1_0002F.1_g002820 Hydrangea macrophylla HOM05D000453 ORTHO05D000387 6.8e-14 81.6 160 44.4
Solyc03g113850.1 Solanum lycopersicum HOM05D000453 ORTHO05D000387 1.2e-13 80.9 131 42.7
Medtr4g106480 Medicago truncatula HOM05D000453 ORTHO05D000387 1.5e-13 80.5 150 36.7
Nitab4.5_0003386g0020 Nicotiana tabacum HOM05D000453 ORTHO05D000387 2.6e-13 79.7 131 44.3
Manes.14G070100 Manihot esculenta HOM05D000453 ORTHO05D000387 3.4e-13 79.3 130 44.6
CsaV3_1G008210 Cucumis sativus L. HOM05D000453 ORTHO05D000387 5.8e-13 78.6 95 48.4
Duzib068G1118 Durio zibethinus HOM05D000453 ORTHO05D000387 5.8e-13 78.6 137 43.8
PGSC0003DMG400024470 Solanum tuberosum HOM05D000453 ORTHO05D000387 5.8e-13 78.6 117 43.6
TWI60G1348 Tripterygium wilfordii HOM05D000453 ORTHO05D000387 5.8e-13 78.6 139 46.8
DCAR_031284 Daucus carota HOM05D000453 ORTHO05D000387 9.9e-13 77.8 145 42.8
Gohir.A05G415100 Gossypium hirsutum HOM05D000453 ORTHO05D000387 2.9e-12 76.3 77 55.8
Gorai.012G002100 Gossypium raimondii HOM05D000453 ORTHO05D000387 2.9e-12 76.3 117 43.6
TWI81G0436 Tripterygium wilfordii HOM05D000453 ORTHO05D000387 6.4e-12 75.1 79 55.7
Oeu018532.1 Olea europaea HOM05D000453 ORTHO05D000387 1.4e-11 73.9 107 43.0
PGR083G0727 Punica granatum HOM05D000453 ORTHO05D000387 1.4e-11 73.9 76 56.6
CSS0006951 Camellia sinensis var. sinensis HOM05D000453 ORTHO05D000387 3.2e-11 72.8 130 43.1
Ciclev10020496m.g Citrus clementina HOM05D000453 ORTHO05D000387 3.2e-11 72.8 77 53.2
CiPaw.11G032100 Carya illinoinensis HOM05D000453 ORTHO05D000387 4.1e-11 72.4 140 42.1
TPR.G37519 Trifolium pratense HOM05D000453 ORTHO05D000387 4.1e-11 72.4 91 41.8
Ah.11g046190 Amaranthus hybridus HOM05D000453 ORTHO05D000387 5.4e-11 72.0 77 57.1
QL03p067161 Quercus lobata HOM05D000453 ORTHO05D000387 7.1e-11 71.6 75 50.7
HanXRQChr02g0044151 Helianthus annuus HOM05D000453 ORTHO05D000387 9.2e-11 71.2 94 44.7
Actinidia04961 Actinidia chinensis HOM05D000453 ORTHO05D000387 1.2e-10 70.9 80 52.5
Nn4g22918 Nelumbo nucifera HOM05D000453 ORTHO05D000387 1.2e-10 70.9 145 49.0
Potri.012G076000 Populus trichocarpa HOM05D000453 ORTHO05D000387 1.2e-10 70.9 94 50.0
AUR62008283 Chenopodium quinoa HOM05D000453 ORTHO05D000387 2.1e-10 70.1 77 54.5
AUR62031044 Chenopodium quinoa HOM05D000453 ORTHO05D000387 2.1e-10 70.1 77 54.5
HanXRQChr04g0100141 Helianthus annuus HOM05D000453 ORTHO05D000387 2.1e-10 70.1 93 48.4
Sabra12G0054200 Salix brachista HOM05D000453 ORTHO05D000387 2.1e-10 70.1 151 38.4
TAR371G0801 Trochodendron aralioides HOM05D000453 ORTHO05D000387 2.1e-10 70.1 133 41.4
CSS0038358 Camellia sinensis var. sinensis HOM05D000453 ORTHO05D000387 2.7e-10 69.7 130 42.3
Lj5P120T40 Lonicera japonica HOM05D000453 ORTHO05D000387 4.6e-10 68.9 139 40.3
Rhsim12G0161600 Rhododendron simsii HOM05D000453 ORTHO05D000387 4.6e-10 68.9 127 48.0
EL10Ac5g10831 Beta vulgaris HOM05D000453 ORTHO05D000387 6.0e-10 68.6 135 42.2
A09p40760 Brassica napus HOM05D000453 ORTHO05D000387 6.0e-10 68.6 126 41.3
Migut.I00057 Erythranthe guttata HOM05D000453 ORTHO05D000387 7.8e-10 68.2 84 45.2
HanXRQChr09g0271831 Helianthus annuus HOM05D000453 ORTHO05D000387 1.0e-09 67.8 107 40.2
HanXRQChr09g0271851 Helianthus annuus HOM05D000453 ORTHO05D000387 1.0e-09 67.8 107 41.1
Lj9P454T53 Lonicera japonica HOM05D000453 ORTHO05D000387 1.0e-09 67.8 76 51.3
Sp6g11990 Schrenkiella parvula HOM05D000453 ORTHO05D000387 1.0e-09 67.8 86 48.8
Cfa009094 Carpinus fangiana HOM05D000453 ORTHO05D000387 1.3e-09 67.4 78 51.3
DCAR_026561 Daucus carota HOM05D000453 ORTHO05D000387 1.7e-09 67.0 112 42.9
ECA232G1289 Erigeron canadensis HOM05D000453 ORTHO05D000387 1.7e-09 67.0 76 51.3
ECA232G2079 Erigeron canadensis HOM05D000453 ORTHO05D000387 1.7e-09 67.0 76 51.3
Lsat_1_v5_gn_4_73501 Lactuca sativa HOM05D000453 ORTHO05D000387 1.7e-09 67.0 78 44.9
AT1G24130 Arabidopsis thaliana HOM05D000453 ORTHO05D000387 2.3e-09 66.6 147 36.7
BcaB07g32412 Brassica carinata HOM05D000453 ORTHO05D000387 2.3e-09 66.6 117 42.7
BraA09t39570Z Brassica rapa HOM05D000453 ORTHO05D000387 2.3e-09 66.6 126 40.5
TWI18G0044 Tripterygium wilfordii HOM05D000453 ORTHO05D000387 2.3e-09 66.6 75 52.0
COL.COLO4_04636 Corchorus olitorius HOM05D000453 ORTHO05D000387 3.0e-09 66.2 142 38.7
CiPaw.12G023000 Carya illinoinensis HOM05D000453 ORTHO05D000387 5.1e-09 65.5 144 38.2
BolC5t31025H Brassica oleracea HOM05D000453 ORTHO05D000387 6.6e-09 65.1 126 40.5
DCAR_026560 Daucus carota HOM05D000453 ORTHO05D000387 6.6e-09 65.1 111 42.3
Thhalv10007766m.g Eutrema salsugineum HOM05D000453 ORTHO05D000387 6.6e-09 65.1 90 46.7
Manes.05G092700 Manihot esculenta HOM05D000453 ORTHO05D000387 6.6e-09 65.1 130 38.5
Sabra15G0095100 Salix brachista HOM05D000453 ORTHO05D000387 6.6e-09 65.1 144 41.7
Sp1g21460 Schrenkiella parvula HOM05D000453 ORTHO05D000387 6.6e-09 65.1 129 38.8
Carub.0001s2357 Capsella rubella HOM05D000453 ORTHO05D000387 8.6e-09 64.7 137 38.0
Aqoxy3G03107 Aquilegia oxysepala HOM05D000453 ORTHO05D000387 1.1e-08 64.3 131 40.5
C05p23250 Brassica napus HOM05D000453 ORTHO05D000387 1.1e-08 64.3 123 40.7
Eucgr.K02880 Eucalyptus grandis HOM05D000453 ORTHO05D000387 1.1e-08 64.3 79 48.1
AL1G37940 Arabidopsis lyrata HOM05D000453 ORTHO05D000387 1.5e-08 63.9 92 43.5
Ciclev10031507m.g Citrus clementina HOM05D000453 ORTHO05D000387 1.5e-08 63.9 133 40.6
Gohir.D04G001100 Gossypium hirsutum HOM05D000453 ORTHO05D000387 1.9e-08 63.5 111 41.4
MSTRG.2376 Avicennia marina HOM05D000453 ORTHO05D000387 2.5e-08 63.2 139 35.3
Sabra15G0096000 Salix brachista HOM05D000453 ORTHO05D000387 2.5e-08 63.2 144 41.0
Oeu017597.1 Olea europaea HOM05D000453 ORTHO05D000387 3.3e-08 62.8 129 38.0
Oeu017598.1 Olea europaea HOM05D000453 ORTHO05D000387 3.3e-08 62.8 129 38.0
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 3.3e-08 62.8 134 42.5
Eucgr.B02566 Eucalyptus grandis HOM05D000453 ORTHO05D000387 4.3e-08 62.4 115 40.0
Lj2g0011758 Lotus japonicus HOM05D000453 ORTHO05D000387 7.3e-08 61.6 79 50.6
Carub.0008s1013 Capsella rubella HOM05D000453 ORTHO05D000387 9.6e-08 61.2 88 46.6
CARHR024420 Cardamine hirsuta HOM05D000453 ORTHO05D000387 9.6e-08 61.2 149 33.6
Manes.06G100500 Manihot esculenta HOM05D000453 ORTHO05D000387 9.6e-08 61.2 112 41.1
PSO591G0483 Papaver somniferum HOM05D000453 ORTHO05D000387 1.2e-07 60.8 80 43.8
PSO832G0487 Papaver somniferum HOM05D000453 ORTHO05D000387 1.2e-07 60.8 80 43.8
CSS0013650 Camellia sinensis var. sinensis HOM05D000453 ORTHO05D000387 1.6e-07 60.5 81 44.4
Atru.chr9.2403 Acer truncatum HOM05D000453 ORTHO05D000387 2.1e-07 60.1 79 46.8
EL10Ac6g13750 Beta vulgaris HOM05D000453 ORTHO05D000387 2.1e-07 60.1 74 48.6
Oeu028547.1 Olea europaea HOM05D000453 ORTHO05D000387 2.1e-07 60.1 79 44.3
MSTRG.632 Avicennia marina HOM05D000453 ORTHO05D000387 2.8e-07 59.7 132 37.9
Nitab4.5_0000257g0060 Nicotiana tabacum HOM05D000453 ORTHO05D000387 2.8e-07 59.7 75 48.0
CiPaw.05G145700 Carya illinoinensis HOM05D000453 ORTHO05D000387 3.6e-07 59.3 74 47.3
Atru.chr11.1946 Acer truncatum HOM05D000453 ORTHO05D000387 4.7e-07 58.9 76 50.0
MD13G1085800 Malus domestica HOM05D000453 ORTHO05D000387 4.7e-07 58.9 78 44.9
THA.LOC104808889 Tarenaya hassleriana HOM05D000453 ORTHO05D000387 6.2e-07 58.5 75 45.3
DCAR_007110 Daucus carota HOM05D000453 ORTHO05D000387 1.1e-06 57.8 75 45.3
Ah.03g132230 Amaranthus hybridus HOM05D000453 ORTHO05D000387 1.4e-06 57.4 89 42.7
CSS0014364 Camellia sinensis var. sinensis HOM05D000453 ORTHO05D000387 1.4e-06 57.4 75 48.0
Haze_07438 Corylus avellana HOM05D000453 ORTHO05D000387 1.4e-06 57.4 116 41.4
MD16G1085100 Malus domestica HOM05D000453 ORTHO05D000387 1.4e-06 57.4 79 43.0
PSO591G0184 Papaver somniferum HOM05D000453 ORTHO05D000387 1.4e-06 57.4 80 41.2
Peaxi162Scf01141g00126 Petunia axillaris HOM05D000453 ORTHO05D000387 1.4e-06 57.4 112 39.3
Duzib205G1794 Durio zibethinus HOM05D000453 ORTHO05D000387 2.4e-06 56.6 117 39.3
PSO161G0025 Papaver somniferum HOM05D000453 ORTHO05D000387 2.4e-06 56.6 78 47.4
Cfa019067 Carpinus fangiana HOM05D000453 ORTHO05D000387 3.1e-06 56.2 123 40.7
HanXRQChr17g0546961 Helianthus annuus HOM05D000453 ORTHO05D000387 3.1e-06 56.2 119 36.1
Lj3P1047T16 Lonicera japonica HOM05D000453 ORTHO05D000387 3.1e-06 56.2 70 48.6
MBI14_g12781_MAGBIO Magnolia biondii HOM05D000453 ORTHO05D000387 3.1e-06 56.2 116 41.4
Nitab4.5_0002059g0020 Nicotiana tabacum HOM05D000453 ORTHO05D000387 3.1e-06 56.2 75 46.7
PSO478G1867 Papaver somniferum HOM05D000453 ORTHO05D000387 3.1e-06 56.2 78 46.2
Cc11_g14140 Coffea canephora HOM05D000453 ORTHO05D000387 5.2e-06 55.5 78 42.3
COL.COLO4_37884 Corchorus olitorius HOM05D000453 ORTHO05D000387 8.9e-06 54.7 85 40.0
Glyma.02G029200 Glycine max HOM05D000453 ORTHO05D000387 8.9e-06 54.7 138 31.9


User provided reference genes

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