Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 1.7e-118 429.5 240 100.0
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 3.4e-42 176.0 139 68.3
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 6.4e-41 171.8 139 66.9
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 1.0e-38 164.5 138 63.8
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 3.3e-37 159.5 139 59.0
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 5.6e-37 158.7 139 61.9
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 7.4e-37 158.3 139 58.3
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 3.7e-36 156.0 139 57.6
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 6.2e-36 155.2 139 59.7
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.8e-35 153.7 138 60.1
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 1.8e-35 153.7 139 59.7
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 4.0e-35 152.5 138 56.5
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 3.4e-34 149.4 140 55.7
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 3.4e-34 149.4 139 56.8
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 5.8e-34 148.7 138 55.8
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 7.6e-34 148.3 138 55.1
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 7.6e-34 148.3 138 55.8
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.7e-33 147.1 138 55.8
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 1.7e-33 147.1 138 55.8
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 2.2e-33 146.7 141 53.2
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 3.8e-33 146.0 138 54.3
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 3.8e-33 146.0 138 54.3
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 3.8e-33 146.0 138 54.3
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 3.8e-33 146.0 138 55.1
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 4.9e-33 145.6 139 56.1
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 6.5e-33 145.2 138 55.1
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 8.4e-33 144.8 142 54.2
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 8.4e-33 144.8 138 54.3
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 1.4e-32 144.1 138 55.1
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 1.9e-32 143.7 138 52.9
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.9e-32 143.7 138 52.9
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.9e-32 143.7 138 54.3
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 2.5e-32 143.3 138 52.2
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 2.5e-32 143.3 136 55.1
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 2.5e-32 143.3 138 52.9
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 2.5e-32 143.3 138 52.9
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 3.2e-32 142.9 138 52.2
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 7.1e-32 141.7 138 51.4
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 9.3e-32 141.4 138 53.6
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 9.3e-32 141.4 138 54.3
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 9.3e-32 141.4 138 52.9
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.2e-31 141.0 138 53.6
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.2e-31 141.0 138 52.9
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 2.1e-31 140.2 138 52.9
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 2.7e-31 139.8 138 52.9
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 3.5e-31 139.4 138 52.2
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 4.6e-31 139.0 139 50.4
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 7.9e-31 138.3 138 50.7
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 1.0e-30 137.9 139 51.8
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 2.3e-30 136.7 138 51.4
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 3.0e-30 136.3 139 56.1
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 3.0e-30 136.3 140 50.0
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 3.9e-30 136.0 138 51.4
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.9e-29 133.7 138 50.7
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 3.3e-29 132.9 138 50.0
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 4.3e-29 132.5 137 50.4
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 5.7e-29 132.1 125 56.0
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 9.7e-29 131.3 138 48.6
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 9.7e-29 131.3 135 50.4
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.6e-28 130.6 135 50.4
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 3.7e-28 129.4 138 48.6
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 8.2e-28 128.3 138 47.8
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 1.1e-27 127.9 137 48.9
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.4e-27 127.5 138 50.0
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 1.2e-26 124.4 139 49.6
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 1.2e-26 124.4 138 48.6
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 2.6e-26 123.2 124 52.4
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.1e-24 117.9 137 43.1
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.6e-23 114.0 138 41.3
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 4.6e-23 112.5 136 44.1
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 1.0e-22 111.3 126 52.4
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.7e-20 104.0 134 41.0
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 1.5e-18 97.4 54 81.5
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 4.5e-18 95.9 136 41.2
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 5.9e-18 95.5 54 79.6
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.3e-17 94.4 136 40.4
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 1.7e-17 94.0 57 75.4
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 2.5e-16 90.1 135 40.0
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 4.2e-16 89.4 51 78.4
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 5.5e-16 89.0 129 35.7
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 3.6e-15 86.3 158 39.2
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 4.7e-15 85.9 137 35.0
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 5.1e-14 82.4 56 75.0
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 1.5e-13 80.9 139 38.1
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 1.3e-12 77.8 135 32.6
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 8.2e-12 75.1 53 66.0
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.4e-11 74.3 52 61.5
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 1.8e-11 73.9 46 71.7
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 1.8e-11 73.9 46 71.7
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 1.8e-11 73.9 46 71.7
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 3.1e-11 73.2 46 69.6
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 4.1e-11 72.8 126 31.0
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 5.3e-11 72.4 135 31.9
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 6.9e-11 72.0 52 65.4
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 6.9e-11 72.0 52 59.6
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 2.6e-10 70.1 141 30.5
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 4.5e-10 69.3 45 68.9
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.7e-09 67.4 135 31.1
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.9e-08 63.9 134 29.9
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.2e-08 63.2 135 30.4
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.6e-07 60.8 135 31.1
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.0e-06 58.2 41 61.0
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 1.4e-06 57.8 135 28.9


User provided reference genes

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