Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21809 Trifolium pratense HOM05D005298 ORTHO05D037798 1.1e-56 223.4 136 100.0
Medtr4g123690 Medicago truncatula HOM05D005298 ORTHO05D008015 1.1e-16 90.5 57 77.2
Ca_21388_v3 Cicer arietinum L. HOM05D005298 ORTHO05D008015 2.4e-16 89.4 63 73.0
TPR.G12648 Trifolium pratense HOM05D005298 ORTHO05D008015 2.4e-16 89.4 63 69.8
Psat0ss1196g0600 Pisum sativum HOM05D005298 ORTHO05D008015 9.1e-16 87.4 63 71.4
TPR.G40673 Trifolium pratense HOM05D005298 ORTHO05D037798 2.9e-14 82.4 67 65.7
Glyma.07G233500 Glycine max HOM05D005298 ORTHO05D008015 4.2e-13 78.6 62 64.5
Phvul.003G119400 Phaseolus vulgaris HOM05D005298 ORTHO05D008015 5.5e-13 78.2 63 61.9
Glyma.17G038500 Glycine max HOM05D005298 ORTHO05D008015 2.7e-12 75.9 62 62.9
Lalb_Chr07g0181831 Lupinus albus HOM05D005298 ORTHO05D008015 2.7e-12 75.9 63 60.3
arahy.Tifrunner.gnm1.ann1.68EF5E Arachis hypogaea HOM05D005298 ORTHO05D008015 6.1e-12 74.7 62 59.7
arahy.Tifrunner.gnm1.ann1.WSVI3W Arachis hypogaea HOM05D005298 ORTHO05D008015 6.1e-12 74.7 62 59.7
Lj4g0022536 Lotus japonicus HOM05D005298 ORTHO05D008015 1.0e-11 73.9 63 58.7
VMungo1215G2609 Vigna mungo HOM05D005298 ORTHO05D008015 1.0e-11 73.9 63 57.1
Sp3g15510 Schrenkiella parvula HOM05D005298 ORTHO05D008015 2.6e-10 69.3 63 52.4
AL3G30390 Arabidopsis lyrata HOM05D005298 ORTHO05D008015 3.3e-10 68.9 63 52.4
Cpa.g.sc146.46 Carica papaya HOM05D005298 ORTHO05D008015 3.3e-10 68.9 62 59.7
Cfa015712 Carpinus fangiana HOM05D005298 ORTHO05D008015 3.3e-10 68.9 43 74.4
AT3G17340 Arabidopsis thaliana HOM05D005298 ORTHO05D008015 4.4e-10 68.6 63 54.0
Haze_00801 Corylus avellana HOM05D005298 ORTHO05D008015 5.7e-10 68.2 43 74.4
Aa31LG8G4260 Aethionema arabicum HOM05D005298 ORTHO05D008015 7.4e-10 67.8 56 58.9
BcaC05g28796 Brassica carinata HOM05D005298 ORTHO05D008015 9.7e-10 67.4 63 50.8
C05p49050 Brassica napus HOM05D005298 ORTHO05D008015 9.7e-10 67.4 63 50.8
BolC5t33645H Brassica oleracea HOM05D005298 ORTHO05D008015 9.7e-10 67.4 63 50.8
CARHR092660 Cardamine hirsuta HOM05D005298 ORTHO05D008015 9.7e-10 67.4 63 52.4
Thhalv10019950m.g Eutrema salsugineum HOM05D005298 ORTHO05D008015 9.7e-10 67.4 63 50.8
Hma1.2p1_0013F.1_g008000 Hydrangea macrophylla HOM05D005298 ORTHO05D008015 9.7e-10 67.4 63 54.0
CSS0017624 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 2.2e-09 66.2 63 54.0
Dinv29532 Davidia involucrata HOM05D005298 ORTHO05D008015 2.2e-09 66.2 57 57.9
Gohir.A02G057201 Gossypium hirsutum HOM05D005298 ORTHO05D008015 2.8e-09 65.9 61 55.7
Aqoxy2G02567 Aquilegia oxysepala HOM05D005298 ORTHO05D008015 3.7e-09 65.5 46 67.4
CiPaw.01G131300 Carya illinoinensis HOM05D005298 ORTHO05D008015 3.7e-09 65.5 43 72.1
Gorai.005G070900 Gossypium raimondii HOM05D005298 ORTHO05D008015 3.7e-09 65.5 61 55.7
Thecc.04G309800 Theobroma cacao HOM05D005298 ORTHO05D008015 3.7e-09 65.5 61 55.7
MD16G1139700 Malus domestica HOM05D005298 ORTHO05D008015 4.8e-09 65.1 42 71.4
Prupe.1G109100 Prunus persica HOM05D005298 ORTHO05D008015 4.8e-09 65.1 42 71.4
TAR362G0426 Trochodendron aralioides HOM05D005298 ORTHO05D008015 4.8e-09 65.1 61 54.1
Actinidia18497 Actinidia chinensis HOM05D005298 ORTHO05D008015 6.3e-09 64.7 44 72.7
DCAR_002539 Daucus carota HOM05D005298 ORTHO05D008015 6.3e-09 64.7 48 70.8
Eucgr.H04107 Eucalyptus grandis HOM05D005298 ORTHO05D008015 6.3e-09 64.7 50 62.0
Carub.0003s1705 Capsella rubella HOM05D005298 ORTHO05D008015 8.2e-09 64.3 63 49.2
Gohir.D02G063000 Gossypium hirsutum HOM05D005298 ORTHO05D008015 8.2e-09 64.3 61 54.1
PSO210G1072 Papaver somniferum HOM05D005298 ORTHO05D008015 8.2e-09 64.3 59 50.8
QL06p013696 Quercus lobata HOM05D005298 ORTHO05D008015 8.2e-09 64.3 43 74.4
Lj3A839G57 Lonicera japonica HOM05D005298 ORTHO05D008015 1.4e-08 63.5 39 79.5
MBI18_g28901_MAGBIO Magnolia biondii HOM05D005298 ORTHO05D008015 1.4e-08 63.5 45 66.7
Nn3g21868 Nelumbo nucifera HOM05D005298 ORTHO05D008015 1.4e-08 63.5 62 48.4
A05p32420 Brassica napus HOM05D005298 ORTHO05D008015 2.4e-08 62.8 46 60.9
Manes.15G003700 Manihot esculenta HOM05D005298 ORTHO05D008015 2.4e-08 62.8 62 53.2
Potri.010G152700 Populus trichocarpa HOM05D005298 ORTHO05D008015 3.1e-08 62.4 62 50.0
GSVIVG01017664001 Vitis vinifera HOM05D005298 ORTHO05D008015 3.1e-08 62.4 36 83.3
GSVIVG01034907001 Vitis vinifera HOM05D005298 ORTHO05D008015 3.1e-08 62.4 36 83.3
Atru.chr4.3122 Acer truncatum HOM05D005298 ORTHO05D008015 5.3e-08 61.6 61 50.8
Rhsim04G0246500 Rhododendron simsii HOM05D005298 ORTHO05D008015 5.3e-08 61.6 42 69.0
Lsat_1_v5_gn_6_69380 Lactuca sativa HOM05D005298 ORTHO05D008015 7.0e-08 61.2 40 72.5
Sabra10G0117500 Salix brachista HOM05D005298 ORTHO05D008015 7.0e-08 61.2 62 50.0
FAN07G1807 Fragaria x ananassa HOM05D005298 ORTHO05D008015 1.2e-07 60.5 62 50.0
FAN17G0175 Fragaria x ananassa HOM05D005298 ORTHO05D008015 1.2e-07 60.5 62 50.0
TWI09G0537 Tripterygium wilfordii HOM05D005298 ORTHO05D008015 2.0e-07 59.7 44 68.2
AUR62029998 Chenopodium quinoa HOM05D005298 ORTHO05D008015 2.6e-07 59.3 63 49.2
Ciclev10004217m.g Citrus clementina HOM05D005298 ORTHO05D008015 2.6e-07 59.3 55 56.4
RcHm_v2.0_Chr4g0426661 Rosa chinensis HOM05D005298 ORTHO05D008015 2.6e-07 59.3 62 46.8
BraA05t22069Z Brassica rapa HOM05D005298 ORTHO05D008015 5.9e-07 58.2 41 65.9
ECA233G2380 Erigeron canadensis HOM05D005298 ORTHO05D008015 5.9e-07 58.2 40 70.0
HanXRQChr09g0251541 Helianthus annuus HOM05D005298 ORTHO05D008015 5.9e-07 58.2 42 66.7
Ah.07g203800 Amaranthus hybridus HOM05D005298 ORTHO05D008015 1.0e-06 57.4 46 63.0
MELO3C021240.2 Cucumis melo HOM05D005298 ORTHO05D008015 1.0e-06 57.4 52 55.8
Solyc01g057520.4 Solanum lycopersicum HOM05D005298 ORTHO05D008015 1.3e-06 57.0 60 46.7
CsaV3_6G000130 Cucumis sativus L. HOM05D005298 ORTHO05D008015 1.7e-06 56.6 52 55.8
FvH4_4g21110 Fragaria vesca HOM05D005298 ORTHO05D008015 1.7e-06 56.6 62 48.4
CDE09G0452 Ceratophyllum demersum HOM05D005298 ORTHO05D008015 2.9e-06 55.8 39 66.7
Peaxi162Scf00126g10123 Petunia axillaris HOM05D005298 ORTHO05D008015 5.0e-06 55.1 60 43.3
Nitab4.5_0000169g0140 Nicotiana tabacum HOM05D005298 ORTHO05D008015 6.5e-06 54.7 51 51.0
CANSAT78G1118 Cannabis sativa HOM05D005298 ORTHO05D008015 8.5e-06 54.3 61 49.2
PGR004G2663 Punica granatum HOM05D005298 ORTHO05D008015 8.5e-06 54.3 38 65.8
Sopen01g022220 Solanum pennellii HOM05D005298 ORTHO05D008015 8.5e-06 54.3 60 45.0


User provided reference genes

Program Settings