Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21754 Trifolium pratense HOM05D004981 ORTHO05D005635 3.0e-129 465.3 257 100.0
Ca_00133_v3 Cicer arietinum L. HOM05D004981 ORTHO05D005635 1.0e-92 344.0 249 71.9
Medtr2g008810 Medicago truncatula HOM05D004981 ORTHO05D005635 3.1e-89 332.4 252 71.0
TPR.G9514 Trifolium pratense HOM05D004981 ORTHO05D005635 7.5e-88 327.8 204 82.8
Psat1g216680 Pisum sativum HOM05D004981 ORTHO05D005635 1.1e-83 313.9 253 68.8
Lj6g0025255 Lotus japonicus HOM05D004981 ORTHO05D005635 3.7e-79 298.9 255 62.4
Lalb_Chr20g0123041 Lupinus albus HOM05D004981 ORTHO05D005635 7.8e-77 291.2 254 61.8
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea HOM05D004981 ORTHO05D005635 2.8e-74 282.7 251 61.0
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea HOM05D004981 ORTHO05D005635 4.7e-74 282.0 251 61.0
Medtr5g017190 Medicago truncatula HOM05D004981 ORTHO05D005635 3.1e-73 279.3 237 67.1
VMungo0540G0644 Vigna mungo HOM05D004981 ORTHO05D005635 1.5e-72 276.9 231 64.5
Glyma.08G179200 Glycine max HOM05D004981 ORTHO05D005635 3.4e-72 275.8 276 57.2
CiPaw.06G153000 Carya illinoinensis HOM05D004981 ORTHO05D005635 9.9e-72 274.2 229 65.1
Glyma.15G053300 Glycine max HOM05D004981 ORTHO05D005635 1.7e-71 273.5 276 56.9
Phvul.006G206700 Phaseolus vulgaris HOM05D004981 ORTHO05D005635 8.4e-71 271.2 231 64.1
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 2.4e-70 269.6 229 63.3
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 3.5e-69 265.8 227 61.7
MELO3C018646.2 Cucumis melo HOM05D004981 ORTHO05D005635 6.0e-69 265.0 225 62.2
Gorai.013G061400 Gossypium raimondii HOM05D004981 ORTHO05D005635 7.8e-69 264.6 232 62.1
Thecc.02G139100 Theobroma cacao HOM05D004981 ORTHO05D005635 7.8e-69 264.6 233 63.1
Dinv24195 Davidia involucrata HOM05D004981 ORTHO05D005635 1.7e-68 263.5 230 60.4
Gohir.A13G067000 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.7e-68 263.5 232 62.1
CsaV3_7G006460 Cucumis sativus L. HOM05D004981 ORTHO05D005635 3.0e-68 262.7 225 62.2
Gohir.D13G054600 Gossypium hirsutum HOM05D004981 ORTHO05D005635 3.0e-68 262.7 232 61.6
Sed0011642 Sechium edule HOM05D004981 ORTHO05D005635 3.9e-68 262.3 225 60.9
Duzib132G0770 Durio zibethinus HOM05D004981 ORTHO05D005635 3.3e-67 259.2 232 61.6
TWI59G1067 Tripterygium wilfordii HOM05D004981 ORTHO05D005635 1.6e-66 256.9 231 60.6
Prupe.8G061500 Prunus persica HOM05D004981 ORTHO05D005635 2.8e-66 256.1 231 60.6
Duzib248G0633 Durio zibethinus HOM05D004981 ORTHO05D005635 1.4e-65 253.8 233 61.4
Lj5A239G83 Lonicera japonica HOM05D004981 ORTHO05D005635 2.4e-65 253.1 230 59.6
Gohir.A03G173700 Gossypium hirsutum HOM05D004981 ORTHO05D005635 3.1e-65 252.7 232 60.8
ClCG09G015370 Citrullus lanatus HOM05D004981 ORTHO05D005635 4.0e-65 252.3 229 59.4
Gorai.005G219800 Gossypium raimondii HOM05D004981 ORTHO05D005635 6.9e-65 251.5 232 60.3
Cpa.g.sc49.24 Carica papaya HOM05D004981 ORTHO05D005635 1.2e-64 250.8 239 58.6
TAR114G0002 Trochodendron aralioides HOM05D004981 ORTHO05D005635 1.5e-64 250.4 228 61.0
Nn5g30124 Nelumbo nucifera HOM05D004981 ORTHO05D005635 2.0e-64 250.0 229 59.8
Gohir.D02G196800 Gossypium hirsutum HOM05D004981 ORTHO05D005635 4.4e-64 248.8 232 59.9
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 5.8e-64 248.4 230 60.0
CANSAT11G0061 Cannabis sativa HOM05D004981 ORTHO05D005635 5.8e-64 248.4 229 61.1
MD05G1045100 Malus domestica HOM05D004981 ORTHO05D005635 9.9e-64 247.7 234 57.7
Manes.06G012400 Manihot esculenta HOM05D004981 ORTHO05D005635 1.3e-63 247.3 233 60.1
PGR142G3166 Punica granatum HOM05D004981 ORTHO05D005635 2.2e-63 246.5 231 59.7
Sc20g0002060 Simmondsia chinensis HOM05D004981 ORTHO05D005635 2.2e-63 246.5 229 58.5
CSS0034779 Camellia sinensis var. sinensis HOM05D004981 ORTHO05D005635 2.9e-63 246.1 229 59.0
COL.COLO4_24958 Corchorus olitorius HOM05D004981 ORTHO05D005635 8.4e-63 244.6 249 57.4
Potri.001G205700 Populus trichocarpa HOM05D004981 ORTHO05D005635 1.9e-62 243.4 230 57.0
Nitab4.5_0008051g0010 Nicotiana tabacum HOM05D004981 ORTHO05D005635 2.4e-62 243.0 227 60.8
Eucgr.I02666 Eucalyptus grandis HOM05D004981 ORTHO05D005635 3.2e-62 242.7 229 59.0
Sopen04g004240 Solanum pennellii HOM05D004981 ORTHO05D005635 3.2e-62 242.7 226 59.7
PGSC0003DMG400011507 Solanum tuberosum HOM05D004981 ORTHO05D005635 3.2e-62 242.7 226 60.2
MBI02_g08724_MAGBIO Magnolia biondii HOM05D004981 ORTHO05D005635 1.2e-61 240.7 229 59.8
Oeu047361.1 Olea europaea HOM05D004981 ORTHO05D005635 1.2e-61 240.7 227 57.7
Peaxi162Scf00152g01024 Petunia axillaris HOM05D004981 ORTHO05D005635 2.1e-61 240.0 223 60.1
GSVIVG01029180001 Vitis vinifera HOM05D004981 ORTHO05D005635 3.5e-61 239.2 228 57.5
Solyc04g009060.4 Solanum lycopersicum HOM05D004981 ORTHO05D005635 7.8e-61 238.0 226 58.8
CAN.G274.6 Capsicum annuum HOM05D004981 ORTHO05D005635 3.9e-60 235.7 226 58.0
Potri.003G023700 Populus trichocarpa HOM05D004981 ORTHO05D005635 5.6e-59 231.9 230 57.4
CDE10G0645 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 7.3e-59 231.5 229 55.0
AUR62010122 Chenopodium quinoa HOM05D004981 ORTHO05D005635 7.3e-59 231.5 223 57.0
MSTRG.20297 Avicennia marina HOM05D004981 ORTHO05D005635 1.3e-58 230.7 225 53.8
Atru.chr5.2124 Acer truncatum HOM05D004981 ORTHO05D005635 2.8e-58 229.6 236 55.1
Rhsim05G0107500 Rhododendron simsii HOM05D004981 ORTHO05D005635 2.4e-57 226.5 234 55.6
EL10Ac9g21471 Beta vulgaris HOM05D004981 ORTHO05D005635 4.0e-57 225.7 214 56.1
Ciclev10025761m.g Citrus clementina HOM05D004981 ORTHO05D005635 6.9e-57 224.9 266 51.5
Sabra01G0158000 Salix brachista HOM05D004981 ORTHO05D005635 6.9e-57 224.9 258 50.8
Cc02_g21590 Coffea canephora HOM05D004981 ORTHO05D005635 9.0e-57 224.6 229 54.1
Rhsim05G0107600 Rhododendron simsii HOM05D004981 ORTHO05D005635 2.0e-56 223.4 234 54.7
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla HOM05D004981 ORTHO05D005635 2.6e-56 223.0 184 63.0
Lsat_1_v5_gn_5_107300 Lactuca sativa HOM05D004981 ORTHO05D005635 2.6e-56 223.0 231 51.1
Dinv09034 Davidia involucrata HOM05D004981 ORTHO05D005635 5.8e-56 221.9 226 54.4
ATR0753G166 Amborella trichopoda HOM05D004981 ORTHO05D005635 9.9e-56 221.1 232 52.6
Migut.B00612 Erythranthe guttata HOM05D004981 ORTHO05D005635 9.9e-56 221.1 225 53.8
Oeu011769.5 Olea europaea HOM05D004981 ORTHO05D005635 2.9e-55 219.5 265 49.1
HanXRQChr16g0514321 Helianthus annuus HOM05D004981 ORTHO05D005635 3.2e-54 216.1 230 51.7
SGA_v2.0_scaffold83G26298 Striga asiatica HOM05D004981 ORTHO05D005635 4.2e-54 215.7 222 53.6
THA.LOC104818438 Tarenaya hassleriana HOM05D004981 ORTHO05D005635 4.6e-53 212.2 222 54.1
ECA234G4021 Erigeron canadensis HOM05D004981 ORTHO05D005635 2.3e-52 209.9 233 49.8
AUR62013118 Chenopodium quinoa HOM05D004981 ORTHO05D005635 8.7e-52 208.0 228 52.2
RcHm_v2.0_Chr7g0191681 Rosa chinensis HOM05D004981 ORTHO05D005635 2.5e-51 206.5 241 55.2
Sabra03G0014800 Salix brachista HOM05D004981 ORTHO05D005635 2.5e-51 206.5 214 56.1
Aa31LG3G17630 Aethionema arabicum HOM05D004981 ORTHO05D005635 1.3e-50 204.1 230 50.0
Sp6g33940 Schrenkiella parvula HOM05D004981 ORTHO05D005635 1.6e-50 203.8 222 52.3
C09p67980 Brassica napus HOM05D004981 ORTHO05D005635 4.8e-50 202.2 230 50.4
BolC9t59557H Brassica oleracea HOM05D004981 ORTHO05D005635 4.8e-50 202.2 230 50.4
DCAR_021855 Daucus carota HOM05D004981 ORTHO05D005635 6.2e-50 201.8 258 47.7
Aqoxy6G00803 Aquilegia oxysepala HOM05D004981 ORTHO05D005635 1.1e-49 201.1 233 52.4
A10p27880 Brassica napus HOM05D004981 ORTHO05D005635 1.4e-49 200.7 230 49.6
BraA10t44837Z Brassica rapa HOM05D004981 ORTHO05D005635 5.3e-49 198.7 230 49.1
SEGI_39436 Sequoiadendron giganteum HOM05D004981 ORTHO05D005635 5.3e-49 198.7 237 51.1
PSO781G0052 Papaver somniferum HOM05D004981 ORTHO05D005635 1.2e-48 197.6 237 49.8
FAN04G0403 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.0e-48 196.8 238 52.9
Nitab4.5_0000480g0020 Nicotiana tabacum HOM05D004981 ORTHO05D005635 2.6e-48 196.4 183 58.5
Hund00058 Selenicereus undatus HOM05D004981 ORTHO05D005635 2.6e-48 196.4 212 53.3
FvH4_5g07000 Fragaria vesca HOM05D004981 ORTHO05D005635 4.5e-48 195.7 238 52.5
FAN18G1425 Fragaria x ananassa HOM05D004981 ORTHO05D005635 4.5e-48 195.7 238 52.5
SalBow5G0436 Salvia bowleyana HOM05D004981 ORTHO05D005635 4.5e-48 195.7 236 48.3
Zm00001eb311320 Zea mays HOM05D004981 ORTHO05D005635 4.5e-48 195.7 228 49.1
BcaB08g37209 Brassica carinata HOM05D004981 ORTHO05D005635 1.3e-47 194.1 227 49.8
FAN08G0200 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.7e-47 193.7 238 52.1
Lj1g0016172 Lotus japonicus HOM05D004981 ORTHO05D005635 1.9e-46 190.3 248 47.2
vmacro19928 Vaccinium macrocarpon HOM05D004981 ORTHO05D005635 4.2e-46 189.1 317 41.0
HPP92_013108 Vanilla planifolia HOM05D004981 ORTHO05D005635 7.1e-46 188.3 214 53.7
Mapoly0041s0053 Marchantia polymorpha HOM05D004981 ORTHO05D005635 2.7e-45 186.4 238 45.0
MD14G1166200 Malus domestica HOM05D004981 ORTHO05D005635 3.9e-44 182.6 232 50.0
Carub.0006s0794 Capsella rubella HOM05D004981 ORTHO05D005635 9.6e-43 177.9 206 51.0
AT5G09390 Arabidopsis thaliana HOM05D004981 ORTHO05D005635 2.1e-42 176.8 206 50.0
CARHR204020 Cardamine hirsuta HOM05D004981 ORTHO05D005635 3.7e-42 176.0 203 49.3
Thhalv10013574m.g Eutrema salsugineum HOM05D004981 ORTHO05D005635 4.8e-42 175.6 207 50.2
Prupe.5G160300 Prunus persica HOM05D004981 ORTHO05D005635 8.2e-42 174.9 243 47.7
PSO541G0435 Papaver somniferum HOM05D004981 ORTHO05D005635 1.1e-41 174.5 237 46.0
Pp3c22_4170 Physcomitrium patens HOM05D004981 ORTHO05D005635 1.1e-41 174.5 229 45.0
Os09g0372400 Oryza sativa ssp. japonica HOM05D004981 ORTHO05D005635 1.4e-41 174.1 161 56.5
AL6G19780 Arabidopsis lyrata HOM05D004981 ORTHO05D005635 1.8e-41 173.7 206 51.0
COL.COLO4_15286 Corchorus olitorius HOM05D004981 ORTHO05D005635 6.9e-41 171.8 229 50.7
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis HOM05D004981 ORTHO05D005635 6.7e-36 155.2 216 44.0
SMO356G0631 Selaginella moellendorffii HOM05D004981 ORTHO05D005635 1.1e-33 147.9 225 40.4
HPP92_013085 Vanilla planifolia HOM05D004981 ORTHO05D005635 1.7e-31 140.6 150 54.7
VMungo1383G1991 Vigna mungo HOM05D004981 ORTHO05D005635 1.4e-30 137.5 143 53.1
CBR_g31506 Chara braunii HOM05D004981 ORTHO05D005635 9.3e-30 134.8 246 37.4
Ah.01g009580 Amaranthus hybridus HOM05D004981 ORTHO05D005635 6.7e-28 128.6 237 38.0
FAN08G2142 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.8e-26 123.2 232 43.1
FAN21G1455 Fragaria x ananassa HOM05D004981 ORTHO05D005635 6.9e-17 92.0 102 53.9
Thecc.06G050700 Theobroma cacao HOM05D004981 ORTHO05D005635 2.0e-16 90.5 86 53.5
Ah.01g009610 Amaranthus hybridus HOM05D004981 ORTHO05D005635 4.5e-16 89.4 76 59.2
C05p07220 Brassica napus HOM05D001624 ORTHO05D005635 7.9e-13 78.6 157 35.7
RcHm_v2.0_Chr7g0224681 Rosa chinensis HOM05D004981 ORTHO05D005635 1.4e-12 77.8 135 40.0
FvH4_4g13240 Fragaria vesca HOM05D004981 ORTHO05D005635 3.0e-12 76.6 116 40.5
Lsat_1_v5_gn_5_82561 Lactuca sativa HOM05D004981 ORTHO05D005635 1.3e-10 71.2 65 56.9
FAN12G0625 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.1e-09 68.2 73 52.1
PRCOL_00000241 Prasinoderma coloniale HOM05D004981 ORTHO05D005635 5.3e-09 65.9 178 28.1
Cre06.g299450 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 2.0e-08 63.9 92 44.6
Dinv07233 Davidia involucrata HOM05D004981 ORTHO05D005635 2.0e-08 63.9 67 49.3
TPR.G22403 Trifolium pratense HOM05D049136 ORTHO05D005635 1.5e-06 57.8 53 60.4


User provided reference genes

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