Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 1.0e-66 256.5 124 100.0
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 3.7e-40 168.3 126 69.8
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.6e-38 162.2 126 67.5
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 2.7e-35 152.1 126 63.5
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 1.0e-34 150.2 127 59.1
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 1.8e-34 149.4 128 57.8
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 3.0e-34 148.7 119 62.2
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 3.9e-34 148.3 128 59.4
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 5.1e-34 147.9 128 59.4
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 1.1e-33 146.7 132 58.3
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 1.5e-33 146.4 132 58.3
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 3.3e-33 145.2 127 59.8
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 7.4e-33 144.1 126 61.9
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 2.2e-32 142.5 129 59.7
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 2.8e-32 142.1 125 58.4
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 3.7e-32 141.7 133 57.1
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 3.7e-32 141.7 125 57.6
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 3.7e-32 141.7 126 58.7
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 4.8e-32 141.4 125 57.6
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 6.3e-32 141.0 126 59.5
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 1.1e-31 140.2 128 56.2
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 1.4e-31 139.8 142 53.5
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 1.8e-31 139.4 126 57.9
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 3.1e-31 138.7 126 54.8
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 4.1e-31 138.3 129 55.0
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 4.1e-31 138.3 122 59.0
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 4.1e-31 138.3 128 56.2
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 7.0e-31 137.5 123 57.7
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 7.0e-31 137.5 130 56.9
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 7.0e-31 137.5 126 54.0
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 9.1e-31 137.1 121 57.0
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 9.1e-31 137.1 121 56.2
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 9.1e-31 137.1 121 56.2
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 9.1e-31 137.1 121 56.2
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.2e-30 136.7 129 52.7
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 1.2e-30 136.7 121 57.9
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 1.6e-30 136.3 121 57.9
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 2.0e-30 136.0 133 55.6
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.0e-30 136.0 134 55.2
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 2.0e-30 136.0 118 57.6
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 2.6e-30 135.6 126 55.6
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 2.6e-30 135.6 118 57.6
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 2.6e-30 135.6 118 57.6
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 3.5e-30 135.2 127 55.9
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 3.5e-30 135.2 118 56.8
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 4.5e-30 134.8 128 55.5
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 5.9e-30 134.4 125 56.0
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 5.9e-30 134.4 128 53.9
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 7.7e-30 134.0 118 55.9
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 7.7e-30 134.0 122 57.4
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 7.7e-30 134.0 129 55.0
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.0e-29 133.7 130 54.6
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.0e-29 133.7 121 55.4
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 2.2e-29 132.5 124 55.6
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 2.2e-29 132.5 125 54.4
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 3.8e-29 131.7 118 55.9
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.1e-28 130.2 118 55.9
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 1.5e-28 129.8 128 52.3
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 1.5e-28 129.8 127 54.3
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 1.9e-28 129.4 123 54.5
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 2.7e-27 125.6 127 52.0
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 1.4e-26 123.2 118 54.2
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 1.4e-26 123.2 125 52.0
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.4e-26 123.2 117 54.7
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 6.7e-26 120.9 123 49.6
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 1.5e-25 119.8 123 49.6
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 2.0e-25 119.4 121 50.4
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 2.6e-25 119.0 125 49.6
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 2.2e-24 115.9 110 55.5
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 2.2e-24 115.9 121 50.4
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 6.3e-24 114.4 122 45.1
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.4e-23 112.5 119 48.7
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.2e-22 110.2 124 47.6
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 3.5e-22 108.6 110 51.8
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 5.9e-22 107.8 122 45.9
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 2.2e-21 105.9 113 48.7
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 9.4e-20 100.5 112 47.3
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.6e-19 98.6 113 42.5
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 4.7e-19 98.2 114 40.4
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 3.0e-18 95.5 244 29.9
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 1.5e-17 93.2 121 43.8
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 2.0e-17 92.8 52 80.8
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 4.8e-16 88.2 55 74.5
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 6.3e-16 87.8 96 47.9
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 2.0e-14 82.8 50 74.0
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 3.5e-14 82.0 56 75.0
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 2.2e-13 79.3 90 46.7
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.8e-13 78.6 126 34.1
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 5.0e-13 78.2 194 30.9
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 1.9e-12 76.3 86 48.8
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.9e-12 76.3 118 35.6
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 2.5e-12 75.9 131 36.6
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 9.4e-12 73.9 127 32.3
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 1.2e-11 73.6 35 100.0
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 3.6e-11 72.0 133 33.8
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.4e-10 70.1 134 34.3
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 1.4e-10 70.1 82 46.3
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 1.8e-10 69.7 51 62.7
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 1.8e-10 69.7 49 61.2
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 4.4e-09 65.1 38 76.3
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 9.8e-09 63.9 132 31.1
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 6.3e-08 61.2 128 31.2
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.8e-07 59.7 102 34.3
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 3.1e-07 58.9 100 33.0
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 2.0e-06 56.2 129 27.1
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 4.5e-06 55.1 144 29.9
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 7.7e-06 54.3 29 89.7


User provided reference genes

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