Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21702 Trifolium pratense HOM05D008067 ORTHO05D010226 4.8e-67 257.7 130 100.0
TPR.G23486 Trifolium pratense HOM05D008067 ORTHO05D010226 3.3e-39 165.2 90 94.4
Psat7g013560 Pisum sativum HOM05D008067 ORTHO05D010226 3.3e-31 138.7 86 86.0
Medtr8g083450 Medicago truncatula HOM05D008067 ORTHO05D010226 2.4e-26 122.5 76 85.5
Psat1g041240 Pisum sativum HOM05D008067 ORTHO05D010226 1.0e-16 90.5 89 61.8
Prupe.7G230000 Prunus persica HOM05D008067 ORTHO05D010226 1.3e-16 90.1 78 60.3
Lalb_Chr05g0222841 Lupinus albus HOM05D008067 ORTHO05D010226 3.0e-16 89.0 80 66.2
Lalb_Chr22g0352831 Lupinus albus HOM05D008067 ORTHO05D010226 6.6e-16 87.8 81 66.7
Glyma.08G039000 Glycine max HOM05D008067 ORTHO05D010226 3.3e-15 85.5 75 66.7
RhsimUnG0085400 Rhododendron simsii HOM05D008067 ORTHO05D010226 3.3e-15 85.5 88 51.1
Glyma.05G231500 Glycine max HOM05D008067 ORTHO05D010226 5.6e-15 84.7 73 68.5
Glyma.09G190000 Glycine max HOM05D008067 ORTHO05D010226 5.6e-15 84.7 78 62.8
Gohir.D07G005400 Gossypium hirsutum HOM05D008067 ORTHO05D010226 7.3e-15 84.3 80 65.0
Gorai.001G004900 Gossypium raimondii HOM05D008067 ORTHO05D010226 7.3e-15 84.3 80 65.0
Gohir.A07G006600 Gossypium hirsutum HOM05D008067 ORTHO05D010226 1.3e-14 83.6 79 62.0
Thecc.09G111500 Theobroma cacao HOM05D008067 ORTHO05D010226 1.6e-14 83.2 78 62.8
TPR.G35272 Trifolium pratense HOM05D003111 ORTHO05D003502 2.1e-14 82.8 75 62.7
Medtr6g086485 Medicago truncatula HOM05D008067 ORTHO05D010226 6.2e-14 81.3 92 57.6
Phvul.004G162800 Phaseolus vulgaris HOM05D008067 ORTHO05D010226 6.2e-14 81.3 84 59.5
Manes.03G019700 Manihot esculenta HOM05D008067 ORTHO05D010226 1.8e-13 79.7 88 59.1
COL.COLO4_34910 Corchorus olitorius HOM05D008067 ORTHO05D010226 2.4e-13 79.3 81 54.3
Glyma.07G086900 Glycine max HOM05D008067 ORTHO05D010226 3.1e-13 79.0 94 55.3
QL02p085507 Quercus lobata HOM05D008067 ORTHO05D010226 4.0e-13 78.6 78 64.1
MD02G1048100 Malus domestica HOM05D008067 ORTHO05D010226 5.3e-13 78.2 77 62.3
Cfa003263 Carpinus fangiana HOM05D008067 ORTHO05D010226 6.9e-13 77.8 78 61.5
Haze_25708 Corylus avellana HOM05D008067 ORTHO05D010226 2.0e-12 76.3 78 60.3
TAR624G0725 Trochodendron aralioides HOM05D008067 ORTHO05D010226 2.6e-12 75.9 78 55.1
Lj2g0006280 Lotus japonicus HOM05D008067 ORTHO05D010226 9.9e-12 73.9 88 54.5
CiPaw.04G164800 Carya illinoinensis HOM05D008067 ORTHO05D010226 1.3e-11 73.6 78 56.4
Gorai.010G070100 Gossypium raimondii HOM05D008067 ORTHO05D010226 1.3e-11 73.6 79 53.2
Lj4g0026171 Lotus japonicus HOM05D008067 ORTHO05D010226 1.3e-11 73.6 65 66.2
RcHm_v2.0_Chr2g0090561 Rosa chinensis HOM05D008067 ORTHO05D010226 2.2e-11 72.8 89 51.7
Potri.018G079200 Populus trichocarpa HOM05D008067 ORTHO05D010226 4.9e-11 71.6 79 57.0
Gohir.D06G060201 Gossypium hirsutum HOM05D008067 ORTHO05D010226 6.4e-11 71.2 111 43.2
CiPaw.03G232800 Carya illinoinensis HOM05D008067 ORTHO05D010226 1.1e-10 70.5 85 50.6
ClCG11G002490 Citrullus lanatus HOM05D008067 ORTHO05D010226 2.4e-10 69.3 84 50.0
Lj2g0013738 Lotus japonicus HOM05D008067 ORTHO05D010226 2.4e-10 69.3 74 56.8
FvH4_1g04950 Fragaria vesca HOM05D008067 ORTHO05D010226 3.2e-10 68.9 88 52.3
Gohir.A06G061900 Gossypium hirsutum HOM05D008067 ORTHO05D010226 3.2e-10 68.9 81 51.9
Ciclev10010044m.g Citrus clementina HOM05D008067 ORTHO05D010226 4.2e-10 68.6 82 50.0
FAN23G0784 Fragaria x ananassa HOM05D008067 ORTHO05D010226 4.2e-10 68.6 80 55.0
Lj2g0025160 Lotus japonicus HOM05D008067 ORTHO05D010226 4.2e-10 68.6 88 52.3
Peaxi162Scf00560g00114 Petunia axillaris HOM05D008067 ORTHO05D010226 4.2e-10 68.6 79 49.4
Phvul.002G313700 Phaseolus vulgaris HOM05D008067 ORTHO05D010226 4.2e-10 68.6 73 58.9
Atru.chr7.1341 Acer truncatum HOM05D008067 ORTHO05D010226 7.1e-10 67.8 49 69.4
MELO3C004555.2 Cucumis melo HOM05D008067 ORTHO05D010226 7.1e-10 67.8 87 49.4
FAN28G1234 Fragaria x ananassa HOM05D008067 ORTHO05D010226 7.1e-10 67.8 91 49.5
Lj2g0022306 Lotus japonicus HOM05D008067 ORTHO05D010226 7.1e-10 67.8 88 53.4
Aqoxy7G01692 Aquilegia oxysepala HOM05D008067 ORTHO05D010226 1.2e-09 67.0 87 52.9
CSS0009961 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 1.2e-09 67.0 78 51.3
CSS0037112 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 1.2e-09 67.0 78 51.3
CsaV3_2G002290 Cucumis sativus L. HOM05D008067 ORTHO05D010226 1.2e-09 67.0 84 48.8
Sed0012648 Sechium edule HOM05D008067 ORTHO05D010226 1.2e-09 67.0 84 50.0
Lsat_1_v5_gn_8_95580 Lactuca sativa HOM05D008067 ORTHO05D010226 2.1e-09 66.2 85 42.4
PGSC0003DMG400000315 Solanum tuberosum HOM05D008067 ORTHO05D010226 3.5e-09 65.5 83 48.2
Nitab4.5_0003537g0010 Nicotiana tabacum HOM05D008067 ORTHO05D010226 4.6e-09 65.1 74 52.7
Sed0011788 Sechium edule HOM05D008067 ORTHO05D010226 4.6e-09 65.1 84 46.4
Solyc12g007060.1 Solanum lycopersicum HOM05D008067 ORTHO05D010226 3.0e-08 62.4 73 47.9
Sopen12g003050 Solanum pennellii HOM05D008067 ORTHO05D010226 3.0e-08 62.4 73 47.9
EL10Ac8g18505 Beta vulgaris HOM05D008067 ORTHO05D010226 1.1e-07 60.5 73 50.7
DCAR_028716 Daucus carota HOM05D008067 ORTHO05D010226 2.5e-07 59.3 65 47.7
Nn8g39208 Nelumbo nucifera HOM05D008067 ORTHO05D010226 7.3e-07 57.8 78 47.4
Ah.09g227900 Amaranthus hybridus HOM05D008067 ORTHO05D010226 9.6e-07 57.4 63 54.0
SHI02746 Sapria himalayana HOM05D008067 ORTHO05D010226 1.3e-06 57.0 66 50.0
HPP92_010803 Vanilla planifolia HOM05D008067 ORTHO05D010226 2.1e-06 56.2 77 46.8
TAR636G2707 Trochodendron aralioides HOM05D003111 ORTHO05D003502 6.2e-06 54.7 49 59.2


User provided reference genes

Program Settings