Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 3.2e-67 258.5 146 100.0
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 3.6e-63 245.0 146 86.3
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 4.2e-59 231.5 146 83.6
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 4.2e-59 231.5 146 83.6
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 7.1e-59 230.7 146 80.8
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 7.9e-58 227.3 146 82.2
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 3.9e-57 224.9 149 89.9
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 2.5e-56 222.2 146 84.2
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 4.3e-56 221.5 146 79.5
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 9.9e-53 210.3 146 80.8
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 2.2e-52 209.1 146 74.0
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 2.7e-50 202.2 146 71.2
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 8.7e-49 197.2 146 70.5
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 8.7e-49 197.2 146 70.5
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 1.1e-48 196.8 145 69.7
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 2.1e-47 192.6 147 70.7
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 2.1e-47 192.6 147 70.7
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 2.1e-47 192.6 148 68.2
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 2.1e-47 192.6 146 69.2
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.8e-46 189.5 146 69.2
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 2.4e-46 189.1 146 67.1
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 4.0e-46 188.3 146 69.2
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 5.3e-46 188.0 146 67.8
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 6.9e-46 187.6 147 69.4
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 6.9e-46 187.6 148 68.9
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 6.9e-46 187.6 142 69.7
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 6.9e-46 187.6 146 68.5
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 1.5e-45 186.4 146 67.8
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 1.5e-45 186.4 147 68.7
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 3.4e-45 185.3 147 66.7
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 3.4e-45 185.3 146 67.8
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 3.4e-45 185.3 146 67.8
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 4.5e-45 184.9 146 67.1
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 5.8e-45 184.5 146 65.8
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 7.6e-45 184.1 146 67.1
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 1.0e-44 183.7 146 67.1
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.7e-44 183.0 139 69.8
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 1.7e-44 183.0 145 69.0
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 1.7e-44 183.0 134 71.6
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 2.9e-44 182.2 146 67.8
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 3.8e-44 181.8 146 67.1
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.8e-44 181.8 139 69.8
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.8e-44 181.8 139 69.8
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 4.9e-44 181.4 139 69.8
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 6.5e-44 181.0 147 66.7
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 6.5e-44 181.0 146 65.8
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 8.4e-44 180.6 137 70.8
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 1.4e-43 179.9 120 76.7
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 1.4e-43 179.9 146 65.1
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 2.5e-43 179.1 146 63.7
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 2.5e-43 179.1 139 68.3
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 4.2e-43 178.3 120 75.0
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 5.5e-43 177.9 158 62.0
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 5.5e-43 177.9 138 69.6
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 5.5e-43 177.9 139 69.1
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 5.5e-43 177.9 170 57.6
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 7.1e-43 177.6 146 63.7
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 9.3e-43 177.2 133 70.7
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 9.3e-43 177.2 133 70.7
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 1.6e-42 176.4 146 65.1
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 2.7e-42 175.6 146 65.8
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.7e-42 175.6 146 65.1
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 4.6e-42 174.9 146 65.8
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 6.0e-42 174.5 146 65.8
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 6.0e-42 174.5 133 69.9
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 6.0e-42 174.5 146 65.8
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 1.0e-41 173.7 146 62.3
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 1.3e-41 173.3 148 64.2
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 1.3e-41 173.3 146 64.4
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 2.3e-41 172.6 141 66.0
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 3.0e-41 172.2 116 75.9
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 3.9e-41 171.8 150 64.0
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 5.1e-41 171.4 127 70.9
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 6.7e-41 171.0 146 62.3
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 6.7e-41 171.0 149 63.8
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 8.7e-41 170.6 118 72.9
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 1.5e-40 169.9 167 58.1
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 1.5e-40 169.9 111 79.3
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.5e-40 169.1 119 70.6
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 2.5e-40 169.1 146 61.0
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 3.3e-40 168.7 119 71.4
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 4.3e-40 168.3 119 69.7
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 4.3e-40 168.3 119 69.7
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 5.7e-40 167.9 143 64.3
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 7.4e-40 167.5 142 64.8
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 1.3e-39 166.8 118 72.0
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 1.3e-39 166.8 146 63.0
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 1.3e-39 166.8 119 70.6
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 2.2e-39 166.0 146 61.6
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 6.3e-39 164.5 146 61.6
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 1.1e-38 163.7 145 60.0
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 1.1e-38 163.7 137 65.7
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.4e-38 162.5 146 62.3
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 3.1e-38 162.2 151 58.3
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 3.4e-37 158.7 146 58.9
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 5.9e-37 157.9 150 62.0
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 1.0e-36 157.1 120 67.5
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 2.5e-35 152.5 119 65.5
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 2.1e-34 149.4 150 62.0
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 3.6e-34 148.7 118 69.5
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 1.4e-33 146.7 118 70.3
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 3.3e-32 142.1 80 86.2
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 7.4e-32 141.0 102 71.6
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 5.3e-30 134.8 119 66.4
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 9.1e-30 134.0 119 66.4
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 9.1e-30 134.0 119 66.4
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 9.1e-30 134.0 118 64.4
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 1.2e-29 133.7 119 64.7
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 1.5e-29 133.3 119 65.5
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 1.5e-29 133.3 119 65.5
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 1.5e-29 133.3 97 72.2
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 2.0e-29 132.9 119 65.5
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 2.0e-29 132.9 83 80.7
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 2.6e-29 132.5 77 85.7
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 1.3e-28 130.2 86 74.4
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 1.9e-27 126.3 70 88.6
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 4.2e-27 125.2 147 51.7
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 7.2e-27 124.4 119 60.5
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 1.2e-26 123.6 94 69.1
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 1.6e-26 123.2 117 54.7
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 1.4e-25 120.2 120 54.2
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 2.8e-23 112.5 85 69.4
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 4.8e-23 111.7 83 69.9
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 3.1e-22 109.0 100 60.0
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 2.2e-20 102.8 169 40.2
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 4.2e-19 98.6 117 47.9
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 1.0e-17 94.0 120 43.3
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 1.4e-17 93.6 73 68.5
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 3.3e-16 89.0 111 47.7
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 4.8e-15 85.1 91 53.8
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 3.5e-13 79.0 63 65.1
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 3.2e-11 72.4 85 56.5
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.4e-09 67.0 35 85.7
Hma1.2p1_0494F.1_g165230 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 2.6e-08 62.8 33 87.9
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 8.2e-07 57.8 84 42.9


User provided reference genes

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