Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 0.0e+00 1184.9 751 100.0
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 2.8e-260 902.1 754 79.2
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 1.8e-254 882.9 749 71.4
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 6.1e-231 804.7 750 64.7
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 1.7e-225 786.6 747 69.7
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 9.9e-197 691.0 805 58.0
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 2.1e-194 683.3 683 69.3
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 1.6e-170 604.0 549 63.6
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 2.4e-166 590.1 811 53.6
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 9.0e-158 561.6 572 58.6
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 4.5e-157 559.3 549 60.5
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 3.3e-144 516.5 547 56.5
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 1.7e-143 514.2 569 54.1
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.6e-141 507.7 594 51.0
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 3.2e-139 500.0 547 54.8
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 5.5e-139 499.2 756 48.1
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 1.2e-138 498.0 541 55.8
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 1.6e-138 497.7 771 45.1
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.1e-138 497.3 747 48.5
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 3.6e-138 496.5 572 53.3
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 2.3e-137 493.8 541 54.5
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 3.7e-135 486.5 550 53.8
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 4.8e-135 486.1 780 42.4
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 4.1e-134 483.0 548 52.6
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 4.1e-134 483.0 566 51.2
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 5.3e-134 482.6 745 47.0
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 1.2e-133 481.5 547 51.2
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.2e-133 481.5 548 52.2
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 4.5e-133 479.6 548 52.6
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 4.5e-133 479.6 750 45.3
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 3.2e-131 473.4 575 49.7
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 4.2e-131 473.0 764 44.4
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 4.0e-129 466.5 569 48.5
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 5.2e-129 466.1 763 46.0
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 6.8e-129 465.7 574 50.0
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 2.8e-127 460.3 539 51.4
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 1.0e-124 451.8 581 47.3
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 3.8e-124 449.9 550 49.3
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 1.2e-122 444.9 539 50.6
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.1e-122 444.1 814 41.5
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 2.7e-122 443.7 549 49.0
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 4.0e-121 439.9 539 50.1
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 4.4e-120 436.4 788 37.9
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 5.7e-120 436.0 541 47.5
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 1.7e-119 434.5 550 49.5
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 2.8e-119 433.7 789 39.0
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 2.8e-119 433.7 550 48.9
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 6.3e-119 432.6 753 43.8
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 1.1e-118 431.8 745 44.0
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.8e-118 431.0 745 43.9
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 1.6e-117 427.9 542 48.7
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 1.6e-117 427.9 542 48.7
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 2.1e-114 417.5 535 46.9
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 2.1e-114 417.5 571 46.4
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 2.9e-111 407.1 492 49.2
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 1.1e-110 405.2 536 47.4
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 2.4e-110 404.1 539 46.9
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 1.6e-109 401.4 786 40.3
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 1.6e-109 401.4 540 46.3
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.6e-109 401.4 539 46.0
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.6e-109 401.4 539 46.0
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.3e-108 397.5 400 57.8
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 8.6e-108 395.6 538 45.9
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 1.1e-107 395.2 479 49.5
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 1.2e-106 391.7 553 46.3
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 4.7e-106 389.8 744 42.3
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 1.4e-105 388.3 785 37.6
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 1.4e-105 388.3 539 48.4
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 2.3e-105 387.5 778 38.9
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.2e-104 385.2 757 38.6
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 7.5e-104 382.5 746 39.1
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 8.3e-103 379.0 745 41.7
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 1.9e-102 377.9 766 42.4
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 9.5e-99 365.5 420 53.3
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 3.2e-94 350.5 594 43.1
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 5.1e-92 343.2 324 65.1
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.2e-82 312.0 528 40.9
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 4.7e-82 310.1 440 45.0
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 3.4e-80 303.9 566 39.6
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 4.4e-80 303.5 556 39.6
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 1.3e-74 285.4 547 38.9
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 7.1e-70 269.6 516 37.0
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 6.7e-68 263.1 389 42.2
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 1.8e-65 255.0 263 58.9
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 4.6e-61 240.4 542 36.0
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 1.8e-60 238.4 359 40.4
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 1.5e-59 235.3 515 33.2
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 2.1e-53 214.9 250 52.0
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 1.1e-46 192.6 507 31.6
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 3.2e-46 191.0 535 29.7
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 2.0e-35 155.2 323 38.1
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 2.6e-32 144.8 182 47.3
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 7.4e-27 126.7 169 50.9
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.9e-23 114.8 122 54.9
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 8.2e-18 96.7 125 48.8
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 9.4e-14 83.2 137 37.2
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.8e-12 79.0 81 58.0
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.5e-11 75.9 128 39.1
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 8.3e-10 70.1 121 38.0
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 9.1e-09 66.6 69 53.6
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 5.9e-08 63.9 95 41.1
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 3.8e-07 61.2 95 38.9
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 5.0e-07 60.8 95 40.0


User provided reference genes

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