Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 4.6e-126 454.5 221 100.0
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 4.0e-114 414.8 221 91.0
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 1.9e-111 406.0 224 88.8
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 7.1e-111 404.1 222 90.5
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 4.6e-102 374.8 227 80.6
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 3.8e-96 355.1 223 79.8
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 1.1e-95 353.6 223 79.4
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 1.9e-95 352.8 226 77.9
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 8.7e-93 344.0 223 80.3
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 1.5e-92 343.2 223 77.6
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 8.2e-91 337.4 217 79.3
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 8.2e-91 337.4 217 79.3
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 1.6e-78 296.6 222 69.4
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 2.1e-78 296.2 228 67.1
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 3.6e-78 295.4 225 68.4
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 1.4e-77 293.5 229 65.1
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 1.1e-76 290.4 222 67.6
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 1.1e-76 290.4 222 67.6
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.0e-76 289.7 222 68.0
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 1.3e-75 287.0 229 66.8
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 2.2e-75 286.2 226 64.6
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 4.8e-75 285.0 228 65.4
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 5.3e-74 281.6 226 65.9
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 2.0e-73 279.6 228 64.0
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 7.7e-73 277.7 235 65.1
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 1.3e-72 276.9 226 65.5
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 1.3e-72 276.9 230 63.0
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 1.7e-72 276.6 235 64.7
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 2.9e-72 275.8 227 63.9
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 2.5e-71 272.7 230 62.6
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 5.5e-71 271.6 229 61.1
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 1.6e-70 270.0 225 64.9
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.7e-70 269.2 226 62.8
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 6.1e-70 268.1 228 61.4
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 7.9e-70 267.7 229 60.3
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 1.0e-69 267.3 226 64.6
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 5.2e-69 265.0 228 62.7
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.3e-67 260.4 240 59.6
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 4.8e-67 258.5 188 70.7
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 8.2e-67 257.7 222 63.5
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 3.1e-66 255.8 188 70.7
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 3.1e-66 255.8 176 73.9
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 4.1e-66 255.4 187 70.1
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 9.1e-66 254.2 187 69.0
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 9.1e-66 254.2 187 71.7
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 1.6e-65 253.4 226 60.2
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.6e-65 253.4 176 73.3
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 1.3e-64 250.4 226 62.8
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 1.3e-64 250.4 226 61.9
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 1.3e-64 250.4 210 62.9
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 1.3e-64 250.4 172 74.4
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 1.7e-64 250.0 187 68.4
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.7e-64 250.0 229 58.1
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 2.2e-64 249.6 176 71.6
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 3.8e-64 248.8 225 61.8
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 5.0e-64 248.4 229 59.0
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 6.5e-64 248.1 225 62.7
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.5e-63 246.1 225 59.6
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 7.2e-63 244.6 227 61.7
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 7.2e-63 244.6 227 61.7
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 7.2e-63 244.6 227 61.7
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.2e-62 243.8 207 62.3
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 1.2e-62 243.8 173 72.8
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 3.6e-62 242.3 173 72.3
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 6.1e-62 241.5 227 59.5
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 8.0e-62 241.1 161 73.3
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 8.0e-62 241.1 212 60.8
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 3.0e-61 239.2 229 57.6
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 1.1e-60 237.3 131 85.5
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 1.5e-60 236.9 203 64.5
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.0e-60 236.5 204 62.7
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.6e-60 236.1 202 63.9
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 4.4e-60 235.3 215 60.9
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 7.5e-60 234.6 130 86.9
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 9.7e-60 234.2 188 66.5
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 3.7e-59 232.3 160 74.4
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 3.7e-59 232.3 160 74.4
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 4.8e-59 231.9 191 64.4
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 4.1e-58 228.8 128 84.4
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 7.0e-58 228.0 228 55.7
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 1.2e-57 227.3 131 82.4
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.2e-56 223.0 218 57.8
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.2e-56 223.0 218 57.8
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 2.7e-54 216.1 126 80.2
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 4.0e-53 212.2 163 66.9
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 6.8e-53 211.5 149 73.8
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 3.4e-52 209.1 169 63.3
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 2.2e-51 206.5 198 60.1
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 3.7e-51 205.7 167 61.1
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 4.1e-50 202.2 143 70.6
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 4.1e-50 202.2 122 82.0
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 7.0e-50 201.4 125 77.6
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 4.5e-49 198.7 212 50.5
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.3e-48 197.2 168 61.3
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.9e-48 196.1 111 83.8
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 3.7e-43 179.1 168 58.9
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 2.5e-39 166.4 224 46.4
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 5.6e-39 165.2 227 44.5
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 3.7e-35 152.5 122 58.2
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 9.2e-34 147.9 128 62.5
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 1.8e-29 133.7 140 55.0
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 9.5e-23 111.3 56 92.9
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 1.6e-22 110.5 159 47.8
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 3.6e-22 109.4 84 70.2
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 1.9e-18 97.1 61 73.8
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 1.7e-16 90.5 112 42.9
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 6.6e-16 88.6 65 67.7
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 2.0e-12 77.0 139 33.1
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 3.8e-11 72.8 45 82.2
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 3.2e-10 69.7 45 80.0
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 2.7e-09 66.6 101 35.6


User provided reference genes

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