Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21558 Trifolium pratense HOM05D010505 ORTHO05D014594 1.0e-160 570.1 297 100.0
TPR.G4039 Trifolium pratense HOM05D010505 ORTHO05D014594 2.1e-134 482.6 298 85.2
TPR.G29155 Trifolium pratense HOM05D010505 ORTHO05D014594 1.4e-74 283.9 323 55.1
TPR.G23982 Trifolium pratense HOM05D010505 ORTHO05D014594 1.5e-68 263.8 324 54.0
TPR.G22082 Trifolium pratense HOM05D010505 ORTHO05D014594 2.5e-66 256.5 314 52.5
TPR.G23185 Trifolium pratense HOM05D010505 ORTHO05D014594 1.2e-60 237.7 315 50.8
Ca_08700_v3 Cicer arietinum L. HOM05D010505 ORTHO05D014594 7.0e-53 211.8 323 47.1
Psat3g080800 Pisum sativum HOM05D010505 ORTHO05D014594 7.0e-53 211.8 341 44.9
Psat0s698g0080 Pisum sativum HOM05D010505 ORTHO05D014594 3.7e-46 189.5 340 40.3
Psat3g087040 Pisum sativum HOM05D010505 ORTHO05D014594 1.4e-45 187.6 341 40.2
Psat1g108920 Pisum sativum HOM05D010505 ORTHO05D014594 9.1e-45 184.9 364 38.2
Psat3g088000 Pisum sativum HOM05D010505 ORTHO05D014594 1.8e-40 170.6 300 41.3
TPR.G8383 Trifolium pratense HOM05D010505 ORTHO05D014594 4.8e-30 136.0 230 43.0
Psat0s4247g0040 Pisum sativum HOM05D010505 ORTHO05D014594 1.3e-11 74.7 165 37.6
Glyma.02G162200 Glycine max HOM05D000333 ORTHO05D000190 5.6e-10 69.3 183 33.9
Glyma.10G101900 Glycine max HOM05D000333 ORTHO05D000190 9.5e-10 68.6 276 28.6
Ca_11231_v3 Cicer arietinum L. HOM05D000333 ORTHO05D000190 1.2e-09 68.2 119 39.5
Lj1g0014985 Lotus japonicus HOM05D000333 ORTHO05D000190 2.8e-09 67.0 74 51.4
Lalb_Chr09g0328931 Lupinus albus HOM05D010505 ORTHO05D000190 1.1e-08 65.1 222 30.6
Actinidia01691 Actinidia chinensis HOM05D000333 ORTHO05D000190 6.8e-08 62.4 197 31.5
Psat5g202560 Pisum sativum HOM05D000333 ORTHO05D000190 6.8e-08 62.4 202 30.7
Potri.016G028100 Populus trichocarpa HOM05D000333 ORTHO05D000190 8.9e-08 62.0 130 39.2
Psat5g214360 Pisum sativum HOM05D000333 ORTHO05D000190 4.4e-07 59.7 69 43.5
Lalb_Chr16g0385421 Lupinus albus HOM05D000333 ORTHO05D000190 7.5e-07 58.9 130 33.1
Medtr2g067740 Medicago truncatula HOM05D000333 ORTHO05D000190 9.8e-07 58.5 111 33.3
EL10Ac2g04137 Beta vulgaris HOM05D000333 ORTHO05D000190 1.7e-06 57.8 203 29.6
Zm00001eb256600 Zea mays HOM05D003047 ORTHO05D000627 1.7e-06 57.8 203 27.6
Ah.16g104900 Amaranthus hybridus HOM05D000333 ORTHO05D000190 2.2e-06 57.4 204 26.5
MD05G1179400 Malus domestica HOM05D000333 ORTHO05D000190 2.2e-06 57.4 105 34.3
Cpa.g.sc48.112 Carica papaya HOM05D000333 ORTHO05D000190 2.9e-06 57.0 238 28.2
COL.COLO4_06932 Corchorus olitorius HOM05D000333 ORTHO05D000190 2.9e-06 57.0 139 32.4
Thecc.05G315800 Theobroma cacao HOM05D000333 ORTHO05D000190 2.9e-06 57.0 171 28.1
AUR62031584 Chenopodium quinoa HOM05D000333 ORTHO05D000190 3.7e-06 56.6 221 31.2
Sabra18G0105700 Salix brachista HOM05D000333 ORTHO05D000190 3.7e-06 56.6 301 28.2
QL07p013417 Quercus lobata HOM05D000333 ORTHO05D000190 4.9e-06 56.2 37 64.9
TPR.G37695 Trifolium pratense HOM05D000333 ORTHO05D000190 6.4e-06 55.8 76 42.1
Aa31LG5G11530 Aethionema arabicum HOM05D000333 ORTHO05D000190 8.3e-06 55.5 131 35.1
CiPaw.14G010900 Carya illinoinensis HOM05D000333 ORTHO05D000190 8.3e-06 55.5 160 30.6
Ciclev10012428m.g Citrus clementina HOM05D000333 ORTHO05D000190 8.3e-06 55.5 60 45.0
Lj3g0021707 Lotus japonicus HOM05D000333 ORTHO05D000190 8.3e-06 55.5 143 32.2


User provided reference genes

Program Settings