Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 0.0e+00 1144.0 559 100.0
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 4.2e-277 957.6 560 85.2
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 2.4e-272 941.8 563 82.1
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 2.0e-255 885.6 563 78.5
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 5.1e-206 721.5 554 68.2
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 9.9e-202 707.2 567 65.8
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 5.6e-197 691.4 571 63.0
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.5e-194 683.3 562 63.0
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 1.7e-177 626.7 564 59.0
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 8.5e-177 624.4 564 58.3
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 9.8e-141 504.6 576 49.7
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 1.0e-137 494.6 602 46.3
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 6.1e-135 485.3 574 47.2
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 1.1e-131 474.6 572 45.8
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 7.0e-131 471.9 582 47.4
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 9.2e-131 471.5 570 46.1
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 1.6e-130 470.7 576 45.7
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 2.7e-130 469.9 560 47.1
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 4.5e-130 469.2 582 45.4
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 1.0e-129 468.0 592 45.1
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 1.7e-129 467.2 569 44.6
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 5.0e-129 465.7 597 45.6
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 6.6e-129 465.3 585 44.4
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.5e-128 464.2 591 44.3
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 4.3e-128 462.6 586 45.1
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 5.6e-128 462.2 582 45.5
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 7.3e-128 461.8 599 44.1
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 1.2e-127 461.1 582 45.5
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.1e-127 460.3 603 43.6
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 2.8e-127 459.9 587 45.3
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 4.7e-127 459.1 581 44.6
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 6.1e-127 458.8 601 45.8
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 1.8e-126 457.2 548 45.3
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 8.9e-126 454.9 584 44.3
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 3.7e-124 449.5 578 45.8
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 4.9e-124 449.1 584 45.0
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 7.0e-123 445.3 575 45.2
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 1.2e-122 444.5 573 44.9
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 1.6e-122 444.1 523 46.3
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 7.8e-122 441.8 573 44.7
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.9e-120 437.2 563 44.2
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 5.6e-120 435.6 562 46.6
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 9.8e-117 424.9 592 43.1
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 1.3e-116 424.5 558 43.9
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 1.7e-116 424.1 562 44.1
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 6.4e-116 422.2 528 45.1
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 2.4e-115 420.2 580 42.2
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 5.4e-115 419.1 567 42.3
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 2.1e-114 417.2 560 42.5
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 4.6e-114 416.0 559 42.4
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 1.3e-113 414.5 559 42.0
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 2.1e-111 407.1 568 41.0
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 4.7e-111 406.0 600 40.5
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 6.2e-111 405.6 567 42.0
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.8e-110 404.1 572 42.8
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 1.8e-110 404.1 576 41.7
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 2.3e-110 403.7 590 40.8
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 5.2e-110 402.5 580 41.4
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.2e-109 401.4 576 41.0
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 3.4e-109 399.8 570 41.6
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 2.2e-108 397.1 566 41.9
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 6.4e-108 395.6 418 50.2
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 1.1e-107 394.8 570 41.2
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 2.4e-107 393.7 559 40.6
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 7.8e-106 388.7 568 40.7
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.0e-105 388.3 579 40.2
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 1.3e-105 387.9 567 40.0
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 1.3e-105 387.9 567 40.0
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 1.7e-105 387.5 570 40.2
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.7e-105 387.5 578 39.8
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 8.6e-105 385.2 579 40.8
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 2.5e-104 383.6 576 40.6
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 7.3e-104 382.1 573 39.8
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 1.6e-103 380.9 567 40.6
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 4.7e-103 379.4 560 39.8
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 4.0e-102 376.3 563 40.5
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.2e-101 374.8 593 37.9
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 2.0e-101 374.0 562 39.9
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 2.0e-101 374.0 568 40.0
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 7.6e-101 372.1 570 39.6
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 7.6e-101 372.1 562 39.5
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 2.2e-100 370.5 562 39.3
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 2.9e-100 370.2 448 46.0
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 2.8e-95 353.6 608 37.5
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 3.6e-95 353.2 244 70.5
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 6.2e-95 352.4 416 44.5
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 4.0e-94 349.7 585 37.1
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 5.3e-94 349.4 568 38.2
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 2.0e-93 347.4 416 46.2
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 1.6e-90 337.8 585 36.1
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 2.1e-90 337.4 548 38.7
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 3.0e-89 333.6 252 67.5
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 4.8e-87 326.2 561 37.4
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 8.1e-87 325.5 556 35.3
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.8e-86 324.3 412 44.7
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.7e-84 317.8 408 42.4
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 3.8e-84 316.6 503 38.2
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 6.4e-84 315.8 444 40.3
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.3e-81 308.1 445 40.7
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 4.0e-78 296.6 360 44.4
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 9.4e-59 232.3 650 28.5
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.2e-50 205.3 191 52.4
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 1.1e-48 198.7 512 28.9
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 1.5e-48 198.4 614 29.2
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 9.1e-38 162.5 134 57.5
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 2.0e-37 161.4 458 26.6
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 4.2e-35 153.7 140 52.9
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 2.3e-33 147.9 141 61.7
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 1.5e-32 145.2 140 50.7
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 2.6e-32 144.4 189 39.2
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 5.7e-32 143.3 130 53.8
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 8.3e-23 112.8 129 43.4
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 3.3e-19 100.9 328 28.0
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.1e-11 75.9 110 44.5
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 2.5e-11 74.7 87 44.8
Medtr3g062350 Medicago truncatula HOM05D006531 ORTHO05D007905 2.3e-09 68.2 36 80.6
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 1.7e-07 62.0 42 59.5
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 3.7e-07 60.8 75 46.7
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.2e-06 57.8 78 37.2


User provided reference genes

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