Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 3.3e-112 408.3 193 100.0
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 1.1e-94 350.1 184 88.0
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.4e-94 349.0 185 88.6
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 8.4e-92 340.5 184 84.8
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 5.3e-86 321.2 181 81.8
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 9.0e-86 320.5 175 83.4
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 5.5e-83 311.2 184 81.0
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 3.0e-81 305.4 184 77.7
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.1e-80 303.5 181 76.8
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 4.8e-79 298.1 164 81.7
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 8.5e-76 287.3 175 77.1
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 3.6e-74 282.0 176 69.3
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 5.7e-72 274.6 176 69.9
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 1.3e-71 273.5 178 72.5
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 2.2e-71 272.7 164 73.8
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 3.7e-71 271.9 163 75.5
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 2.4e-70 269.2 178 68.5
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 4.1e-70 268.5 180 71.1
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 5.3e-70 268.1 181 69.6
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 6.9e-70 267.7 170 72.9
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.2e-69 266.9 178 67.4
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.5e-69 266.5 178 68.0
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 1.5e-69 266.5 184 66.8
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 2.0e-69 266.2 178 65.7
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 2.0e-69 266.2 176 67.0
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 3.4e-69 265.4 163 73.0
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 4.5e-69 265.0 176 68.8
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 4.5e-69 265.0 178 67.4
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 4.5e-69 265.0 178 68.0
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 5.9e-69 264.6 178 67.4
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 7.7e-69 264.2 170 72.4
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.0e-68 263.8 170 70.6
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.0e-68 263.8 170 71.8
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.7e-68 263.1 179 67.6
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.7e-68 263.1 183 64.5
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.2e-68 262.7 176 67.6
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.9e-68 262.3 178 69.1
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 2.9e-68 262.3 178 65.2
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 3.8e-68 261.9 178 66.9
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 6.5e-68 261.2 178 64.6
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.4e-67 260.0 178 65.7
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 2.5e-67 259.2 178 69.1
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 5.5e-67 258.1 178 67.4
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 7.2e-67 257.7 182 63.7
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.2e-66 256.9 174 66.1
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 2.1e-66 256.1 182 63.7
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 4.7e-66 255.0 174 65.5
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 7.9e-66 254.2 179 65.9
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 1.0e-65 253.8 176 65.9
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 1.0e-65 253.8 163 68.7
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.4e-65 253.4 176 64.8
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 3.0e-65 252.3 176 65.9
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 5.1e-65 251.5 207 61.4
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 8.8e-65 250.8 176 63.6
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.1e-64 250.4 162 69.1
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.5e-64 250.0 182 62.6
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 3.3e-64 248.8 182 62.6
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 5.7e-64 248.1 162 68.5
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 5.7e-64 248.1 162 68.5
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 5.7e-64 248.1 178 64.6
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 7.4e-64 247.7 165 70.3
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 9.7e-64 247.3 170 65.9
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.3e-63 246.9 178 62.4
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 2.8e-63 245.7 173 65.9
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 3.7e-63 245.4 164 67.1
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 6.3e-63 244.6 182 62.1
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.1e-62 243.8 181 62.4
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 1.5e-61 240.0 179 60.9
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 2.0e-61 239.6 183 59.0
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 1.5e-59 233.4 200 57.0
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 4.2e-59 231.9 191 57.6
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 4.7e-58 228.4 233 48.5
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.3e-57 226.1 144 69.4
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 2.0e-56 223.0 178 60.1
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 7.4e-56 221.1 182 58.2
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 1.3e-55 220.3 174 59.8
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 5.3e-54 214.9 183 55.7
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 4.5e-53 211.8 156 64.1
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 2.9e-52 209.1 170 58.8
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 3.8e-52 208.8 162 66.7
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.5e-51 206.8 190 52.6
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 7.2e-51 204.5 205 53.2
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 1.2e-48 197.2 100 89.0
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.5e-48 196.8 181 55.8
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 2.7e-45 186.0 209 48.3
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 8.5e-44 181.0 170 56.5
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 1.1e-43 180.6 116 69.0
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.9e-43 179.9 162 53.7
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 5.5e-43 178.3 131 59.5
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 2.1e-42 176.4 128 64.1
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 8.0e-42 174.5 178 51.7
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 8.0e-42 174.5 204 43.6
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.5e-40 170.2 216 42.6
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 4.1e-38 162.2 112 70.5
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.2e-34 150.6 168 44.6
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 8.9e-33 144.4 186 40.3
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.2e-32 144.1 160 45.6
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 2.0e-29 133.3 178 37.6
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 4.6e-29 132.1 76 69.7
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 7.8e-29 131.3 187 41.2
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 6.6e-28 128.3 67 79.1
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 4.3e-27 125.6 170 38.2
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 6.1e-26 121.7 125 50.4
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 5.2e-25 118.6 148 43.9
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.2e-16 90.9 90 50.0
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 9.2e-14 81.3 122 39.3
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 1.5e-08 63.9 46 63.0
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 4.9e-07 58.9 30 70.0
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 1.9e-06 57.0 38 57.9
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 2.4e-06 56.6 32 68.8


User provided reference genes

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