Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 1.4e-75 286.2 141 100.0
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 4.2e-40 168.3 115 72.2
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 1.8e-35 152.9 115 65.2
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 1.9e-32 142.9 109 67.0
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 2.1e-31 139.4 120 60.0
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 5.1e-30 134.8 79 79.7
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 2.8e-28 129.0 123 59.3
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 4.1e-27 125.2 124 57.3
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 1.2e-26 123.6 124 54.8
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 2.6e-26 122.5 113 58.4
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.4e-16 90.1 55 76.4
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 2.5e-16 89.4 107 44.9
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 5.5e-16 88.2 78 57.7
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 7.2e-16 87.8 50 74.0
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 7.2e-16 87.8 50 74.0
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 9.4e-16 87.4 50 76.0
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 9.4e-16 87.4 50 76.0
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 9.4e-16 87.4 67 59.7
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.2e-15 87.0 54 68.5
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.2e-15 87.0 88 53.4
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 1.2e-15 87.0 54 70.4
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.6e-15 86.7 59 67.8
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 2.7e-15 85.9 120 45.0
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 2.7e-15 85.9 55 63.6
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 2.7e-15 85.9 55 72.7
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 2.7e-15 85.9 44 81.8
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 2.7e-15 85.9 58 67.2
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 2.7e-15 85.9 58 67.2
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 2.7e-15 85.9 58 67.2
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 3.6e-15 85.5 54 66.7
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 3.6e-15 85.5 68 60.3
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 4.7e-15 85.1 70 55.7
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 6.1e-15 84.7 118 45.8
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 7.9e-15 84.3 42 81.0
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 7.9e-15 84.3 42 81.0
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 7.9e-15 84.3 50 72.0
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.0e-14 84.0 80 51.2
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 1.0e-14 84.0 93 48.4
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 1.0e-14 84.0 54 68.5
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.0e-14 84.0 104 47.1
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.0e-14 84.0 68 58.8
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.4e-14 83.6 64 62.5
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 1.8e-14 83.2 76 53.9
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 1.8e-14 83.2 69 56.5
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 2.3e-14 82.8 43 81.4
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 3.0e-14 82.4 56 64.3
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 5.2e-14 81.6 69 58.0
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 5.2e-14 81.6 37 83.8
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 5.2e-14 81.6 37 83.8
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 5.2e-14 81.6 39 82.1
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 6.7e-14 81.3 42 83.3
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 8.8e-14 80.9 39 79.5
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 8.8e-14 80.9 47 74.5
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 8.8e-14 80.9 96 46.9
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.1e-13 80.5 54 68.5
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 1.1e-13 80.5 101 47.5
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 1.5e-13 80.1 73 53.4
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.5e-13 80.1 54 68.5
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.5e-13 80.1 54 68.5
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 1.5e-13 80.1 44 75.0
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 2.0e-13 79.7 114 45.6
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.0e-13 79.7 58 60.3
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 2.0e-13 79.7 62 59.7
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 2.0e-13 79.7 43 79.1
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 3.3e-13 79.0 140 42.1
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 3.3e-13 79.0 66 59.1
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 4.4e-13 78.6 52 69.2
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 5.7e-13 78.2 136 36.8
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 9.7e-13 77.4 39 76.9
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 1.3e-12 77.0 62 54.8
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 1.3e-12 77.0 33 90.9
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 2.2e-12 76.3 116 39.7
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 2.2e-12 76.3 124 41.9
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 4.8e-12 75.1 42 73.8
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 8.2e-12 74.3 48 60.4
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 8.2e-12 74.3 41 75.6
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 1.1e-11 73.9 31 93.5
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 1.1e-11 73.9 31 93.5
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 1.1e-11 73.9 31 93.5
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 1.1e-11 73.9 78 50.0
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 1.4e-11 73.6 29 96.6
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 1.4e-11 73.6 71 52.1
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 1.4e-11 73.6 32 87.5
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.8e-11 73.2 119 40.3
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.1e-11 72.4 65 49.2
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.1e-11 72.4 61 52.5
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 5.3e-11 71.6 65 49.2
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 7.0e-11 71.2 37 70.3
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 9.1e-11 70.9 31 87.1
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 9.1e-11 70.9 56 53.6
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 1.6e-10 70.1 36 75.0
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 2.0e-10 69.7 35 80.0
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 5.9e-10 68.2 31 80.6
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 7.7e-10 67.8 64 51.6
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 7.7e-10 67.8 42 69.0
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 1.0e-09 67.4 29 86.2
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 2.9e-09 65.9 40 62.5
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 3.8e-09 65.5 32 75.0
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.1e-08 63.9 64 48.4
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.1e-08 63.9 29 82.8
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 1.5e-08 63.5 96 38.5
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 9.4e-08 60.8 84 38.1
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 2.7e-07 59.3 39 69.2
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 3.6e-07 58.9 35 65.7
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 4.0e-06 55.5 35 65.7


User provided reference genes

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