Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21513 Trifolium pratense HOM05D006313 ORTHO05D007853 5.1e-121 437.6 195 100.0
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 4.1e-118 427.9 195 95.9
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 5.1e-113 411.0 195 91.3
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 1.1e-112 409.8 195 90.3
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 1.1e-112 409.8 195 90.3
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 4.8e-111 404.4 195 90.8
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 3.8e-108 394.8 195 88.7
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 1.1e-102 376.7 193 86.0
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 1.1e-102 376.7 193 86.0
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 5.3e-102 374.4 196 83.7
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 2.5e-99 365.5 193 81.9
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 5.5e-99 364.4 195 82.6
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 3.6e-98 361.7 193 80.3
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 6.1e-98 360.9 193 79.8
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 7.9e-98 360.5 193 79.3
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 1.0e-97 360.1 193 79.8
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 3.0e-97 358.6 191 80.1
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 3.9e-97 358.2 193 79.3
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 3.9e-97 358.2 191 81.2
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 5.2e-97 357.8 195 81.0
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 2.0e-96 355.9 193 78.8
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 2.0e-96 355.9 191 80.6
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 5.7e-96 354.4 191 80.6
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 1.3e-95 353.2 193 78.8
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 1.7e-95 352.8 193 77.7
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 2.2e-95 352.4 193 79.8
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 3.7e-95 351.7 193 78.2
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 3.7e-95 351.7 191 78.5
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 6.3e-95 350.9 191 79.1
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 8.2e-95 350.5 193 78.2
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 1.1e-94 350.1 193 77.2
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.4e-94 349.7 192 78.6
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 1.4e-94 349.7 193 77.2
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 1.4e-94 349.7 193 77.7
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 1.8e-94 349.4 193 77.7
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 1.8e-94 349.4 193 77.7
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 1.8e-94 349.4 193 78.2
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 2.4e-94 349.0 193 77.7
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 4.1e-94 348.2 193 78.2
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 5.3e-94 347.8 193 78.2
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 9.1e-94 347.1 193 77.2
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 2.6e-93 345.5 192 78.1
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 3.5e-93 345.1 193 77.7
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 1.3e-92 343.2 191 79.1
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 2.2e-92 342.4 193 75.6
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 3.8e-92 341.7 191 78.5
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 8.5e-92 340.5 193 74.6
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 8.5e-92 340.5 192 76.0
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 8.5e-92 340.5 193 75.1
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 1.1e-91 340.1 193 76.2
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 1.9e-91 339.3 193 75.1
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 2.5e-91 339.0 191 78.0
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 2.5e-91 339.0 193 76.2
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 5.5e-91 337.8 198 74.7
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 9.4e-91 337.0 191 77.0
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 1.2e-90 336.7 190 77.9
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 1.2e-90 336.7 191 76.4
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 2.1e-90 335.9 190 75.3
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 1.0e-89 333.6 191 74.9
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 1.4e-89 333.2 193 73.6
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 1.4e-89 333.2 191 73.8
Sc02g0009110 Simmondsia chinensis HOM05D006313 ORTHO05D007853 3.0e-89 332.0 191 75.9
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 4.0e-89 331.6 191 74.9
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 5.2e-89 331.3 191 74.9
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 1.5e-88 329.7 191 74.9
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 1.5e-88 329.7 191 77.0
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 2.6e-88 328.9 190 74.2
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 1.7e-87 326.2 193 71.5
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 2.2e-87 325.9 190 74.2
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 6.3e-87 324.3 191 73.3
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 8.2e-87 323.9 189 74.6
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 2.4e-86 322.4 191 73.3
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 2.4e-86 322.4 191 73.3
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 2.4e-86 322.4 191 73.3
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 2.4e-86 322.4 191 73.3
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 5.3e-86 321.2 191 72.8
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 2.0e-85 319.3 191 71.7
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 4.5e-85 318.2 191 71.7
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 2.9e-84 315.5 191 70.2
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 9.4e-83 310.5 190 69.5
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 4.7e-82 308.1 193 68.4
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 4.0e-81 305.1 191 68.1
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 1.5e-80 303.1 193 70.5
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.5e-80 303.1 193 71.5
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 8.3e-79 297.4 172 73.3
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 8.3e-79 297.4 164 78.0
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 9.1e-78 293.9 177 72.3
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 2.5e-75 285.8 193 64.2
Mapoly0001s0491 Marchantia polymorpha HOM05D006313 ORTHO05D007853 3.6e-74 282.0 193 62.7
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 1.3e-71 273.5 189 61.9
ClCG11G018700 Citrullus lanatus HOM05D006313 ORTHO05D007853 3.7e-71 271.9 148 79.7
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 1.6e-69 266.5 192 60.4
Psat2g064920 Pisum sativum HOM05D006313 ORTHO05D007853 3.8e-68 261.9 122 94.3
Sabra05G0194300 Salix brachista HOM05D006313 ORTHO05D007853 2.8e-66 255.8 147 74.8
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 5.2e-65 251.5 146 74.0
AUR62036859 Chenopodium quinoa HOM05D006313 ORTHO05D007853 2.2e-63 246.1 183 61.7
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 1.1e-62 243.8 193 57.5
Cpa.g.sc801.5 Carica papaya HOM05D006313 ORTHO05D007853 2.3e-57 226.1 121 74.4
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 2.2e-55 219.5 196 53.1
CBR_g6381 Chara braunii HOM05D006313 ORTHO05D007853 7.3e-51 204.5 145 58.6
CSS0049724 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 1.9e-46 189.9 160 55.6
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 3.5e-45 185.7 105 81.0
Cpa.g.sc26.189 Carica papaya HOM05D006313 ORTHO05D007853 2.1e-42 176.4 101 80.2
SEGI_13417 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 7.6e-40 167.9 93 72.0
Zm00001eb379580 Zea mays HOM05D006313 ORTHO05D007853 1.4e-38 163.7 98 72.4
Cfa012651 Carpinus fangiana HOM05D006313 ORTHO05D007853 8.1e-34 147.9 95 71.6
SEGI_26691 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 3.4e-32 142.5 99 61.6
COL.COLO4_05222 Corchorus olitorius HOM05D006313 ORTHO05D007853 1.7e-23 113.6 52 86.5
CSS0044355 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 1.1e-22 110.9 69 73.9
Manes.18G005201 Manihot esculenta HOM05D006313 ORTHO05D007853 1.3e-18 97.4 56 76.8
PRCOL_00004404 Prasinoderma coloniale HOM05D006313 ORTHO05D007853 3.7e-18 95.9 202 31.7
BolC3t20551H Brassica oleracea HOM05D006313 ORTHO05D007853 6.9e-09 65.1 52 57.7


User provided reference genes

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