Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21455 Trifolium pratense HOM05D004804 ORTHO05D005882 3.5e-208 728.0 362 100.0
Medtr7g100345 Medicago truncatula HOM05D004804 ORTHO05D005882 8.1e-189 663.7 364 90.7
Ca_07739_v3 Cicer arietinum L. HOM05D004804 ORTHO05D005882 2.2e-186 655.6 366 90.7
Glyma.03G173400 Glycine max HOM05D004804 ORTHO05D005882 4.8e-181 637.9 362 87.3
Glyma.19G174300 Glycine max HOM05D004804 ORTHO05D005882 1.1e-180 636.7 362 86.7
Ca_08795_v3 Cicer arietinum L. HOM05D004804 ORTHO05D005882 9.0e-180 633.6 363 87.1
Phvul.001G170900 Phaseolus vulgaris HOM05D004804 ORTHO05D005882 2.5e-177 625.5 362 85.4
Lj1g0023900 Lotus japonicus HOM05D004804 ORTHO05D005882 6.1e-176 620.9 363 84.3
arahy.Tifrunner.gnm1.ann1.EYL599 Arachis hypogaea HOM05D004804 ORTHO05D005882 4.3e-174 614.8 364 83.5
VMungo1383G1812 Vigna mungo HOM05D004804 ORTHO05D005882 4.3e-174 614.8 362 83.4
Lalb_Chr25g0289471 Lupinus albus HOM05D004804 ORTHO05D005882 2.2e-170 602.4 362 82.9
Lalb_Chr20g0113121 Lupinus albus HOM05D004804 ORTHO05D005882 1.2e-163 580.1 362 80.7
Psat3g121680 Pisum sativum HOM05D004804 ORTHO05D005882 2.2e-162 575.9 323 88.9
Haze_20724 Corylus avellana HOM05D004804 ORTHO05D005882 4.5e-155 551.6 370 72.2
QL07p046693 Quercus lobata HOM05D004804 ORTHO05D005882 5.9e-155 551.2 373 73.2
Cfa017439 Carpinus fangiana HOM05D004804 ORTHO05D005882 1.0e-154 550.4 370 72.4
Gohir.D04G118600 Gossypium hirsutum HOM05D004804 ORTHO05D005882 1.1e-153 547.0 364 71.7
Duzib093G1125 Durio zibethinus HOM05D004804 ORTHO05D005882 5.5e-153 544.7 362 72.4
CsaV3_4G024670 Cucumis sativus L. HOM05D004804 ORTHO05D005882 7.2e-153 544.3 363 71.1
Sed0001519 Sechium edule HOM05D004804 ORTHO05D005882 1.6e-152 543.1 369 71.0
PGR004G0439 Punica granatum HOM05D004804 ORTHO05D005882 2.1e-152 542.7 368 71.2
RcHm_v2.0_Chr3g0467571 Rosa chinensis HOM05D004804 ORTHO05D005882 2.1e-152 542.7 364 72.0
Gorai.009G423800 Gossypium raimondii HOM05D004804 ORTHO05D005882 2.7e-152 542.3 365 71.5
CiPaw.09G187800 Carya illinoinensis HOM05D004804 ORTHO05D005882 3.6e-152 542.0 369 70.5
Dinv37213 Davidia involucrata HOM05D004804 ORTHO05D005882 3.6e-152 542.0 361 72.6
Gohir.A04G079400 Gossypium hirsutum HOM05D004804 ORTHO05D005882 3.0e-151 538.9 364 71.2
Thecc.05G045900 Theobroma cacao HOM05D004804 ORTHO05D005882 8.8e-151 537.3 363 71.1
FvH4_6g14490 Fragaria vesca HOM05D004804 ORTHO05D005882 4.4e-150 535.0 364 71.2
Manes.08G076545 Manihot esculenta HOM05D004804 ORTHO05D005882 1.3e-149 533.5 371 71.4
Peaxi162Scf00039g00093 Petunia axillaris HOM05D004804 ORTHO05D005882 2.2e-149 532.7 364 70.1
COL.COLO4_14869 Corchorus olitorius HOM05D004804 ORTHO05D005882 2.8e-149 532.3 363 70.2
FAN02G1589 Fragaria x ananassa HOM05D004804 ORTHO05D005882 6.3e-149 531.2 362 70.2
MD04G1119400 Malus domestica HOM05D004804 ORTHO05D005882 6.3e-149 531.2 363 71.1
CANSAT80G2153 Cannabis sativa HOM05D004804 ORTHO05D005882 2.4e-148 529.3 369 69.1
MD12G1136700 Malus domestica HOM05D004804 ORTHO05D005882 7.0e-148 527.7 369 69.6
SalBow4G1685 Salvia bowleyana HOM05D004804 ORTHO05D005882 7.0e-148 527.7 366 70.5
Hma1.2p1_1481F.1_g286070 Hydrangea macrophylla HOM05D004804 ORTHO05D005882 2.0e-147 526.2 311 77.5
Ciclev10012025m.g Citrus clementina HOM05D004804 ORTHO05D005882 3.5e-147 525.4 363 68.9
FAN09G0808 Fragaria x ananassa HOM05D004804 ORTHO05D005882 3.5e-147 525.4 365 70.4
SGA_v2.0_scaffold126G33837 Striga asiatica HOM05D004804 ORTHO05D005882 3.5e-147 525.4 370 68.6
Solyc09g005700.3 Solanum lycopersicum HOM05D004804 ORTHO05D005882 1.0e-146 523.9 366 69.1
GSVIVG01025612001 Vitis vinifera HOM05D004804 ORTHO05D005882 1.3e-146 523.5 299 78.9
ClCG04G008480 Citrullus lanatus HOM05D004804 ORTHO05D005882 1.7e-146 523.1 378 66.9
Lj2A100T74 Lonicera japonica HOM05D004804 ORTHO05D005882 1.7e-146 523.1 317 74.4
Atru.chr8.1921 Acer truncatum HOM05D004804 ORTHO05D005882 2.2e-146 522.7 367 68.4
Eucgr.K03171 Eucalyptus grandis HOM05D004804 ORTHO05D005882 3.8e-146 521.9 360 69.2
EL10Ac2g02842 Beta vulgaris HOM05D004804 ORTHO05D005882 1.1e-145 520.4 369 69.1
Nn2g12889 Nelumbo nucifera HOM05D004804 ORTHO05D005882 1.5e-145 520.0 362 67.7
TWI53G1005 Tripterygium wilfordii HOM05D004804 ORTHO05D005882 1.5e-145 520.0 372 68.8
Aqoxy4G03017 Aquilegia oxysepala HOM05D004804 ORTHO05D005882 3.2e-145 518.8 373 67.3
SalBow1G1981 Salvia bowleyana HOM05D004804 ORTHO05D005882 3.2e-145 518.8 364 70.1
A05p08530 Brassica napus HOM05D004804 ORTHO05D005882 4.2e-145 518.5 362 70.2
CAN.G125.11 Capsicum annuum HOM05D004804 ORTHO05D005882 4.2e-145 518.5 309 75.4
Actinidia05292 Actinidia chinensis HOM05D004804 ORTHO05D005882 5.5e-145 518.1 372 67.2
BraA05t19821Z Brassica rapa HOM05D004804 ORTHO05D005882 5.5e-145 518.1 362 70.2
Ah.10g030750 Amaranthus hybridus HOM05D004804 ORTHO05D005882 9.4e-145 517.3 315 75.6
C04p10610 Brassica napus HOM05D004804 ORTHO05D005882 9.4e-145 517.3 366 69.1
BolC4t22652H Brassica oleracea HOM05D004804 ORTHO05D005882 9.4e-145 517.3 366 69.1
Cc06_g03070 Coffea canephora HOM05D004804 ORTHO05D005882 1.2e-144 516.9 366 67.8
Rhsim05G0187300 Rhododendron simsii HOM05D004804 ORTHO05D005882 1.2e-144 516.9 386 65.0
Oeu029811.2 Olea europaea HOM05D004804 ORTHO05D005882 2.1e-144 516.2 354 71.8
TAR623G1260 Trochodendron aralioides HOM05D004804 ORTHO05D005882 4.7e-144 515.0 362 67.4
Nitab4.5_0002995g0070 Nicotiana tabacum HOM05D004804 ORTHO05D005882 8.0e-144 514.2 360 69.7
Migut.L01624 Erythranthe guttata HOM05D004804 ORTHO05D005882 1.4e-143 513.5 368 69.8
Hund13338 Selenicereus undatus HOM05D004804 ORTHO05D005882 1.8e-143 513.1 315 74.9
AT3G53580 Arabidopsis thaliana HOM05D004804 ORTHO05D005882 2.3e-143 512.7 363 68.6
Carub.0005s2015 Capsella rubella HOM05D004804 ORTHO05D005882 2.3e-143 512.7 365 69.6
Sc01g0003910 Simmondsia chinensis HOM05D004804 ORTHO05D005882 2.3e-143 512.7 353 70.3
MSTRG.5692 Avicennia marina HOM05D004804 ORTHO05D005882 4.0e-143 511.9 375 66.9
THA.LOC104806587 Tarenaya hassleriana HOM05D004804 ORTHO05D005882 2.6e-142 509.2 362 68.0
Lsat_1_v5_gn_2_111181 Lactuca sativa HOM05D004804 ORTHO05D005882 3.4e-142 508.8 368 65.2
Potri.016G120900 Populus trichocarpa HOM05D004804 ORTHO05D005882 5.7e-142 508.1 342 72.5
Thhalv10010477m.g Eutrema salsugineum HOM05D004804 ORTHO05D005882 9.8e-142 507.3 366 68.6
ECA238G1409 Erigeron canadensis HOM05D004804 ORTHO05D005882 1.7e-141 506.5 352 67.3
Thhalv10016845m.g Eutrema salsugineum HOM05D004804 ORTHO05D005882 1.7e-141 506.5 367 67.3
AL5G34510 Arabidopsis lyrata HOM05D004804 ORTHO05D005882 3.7e-141 505.4 363 68.3
CARHR163490 Cardamine hirsuta HOM05D004804 ORTHO05D005882 8.3e-141 504.2 364 69.2
Sp4g19750 Schrenkiella parvula HOM05D004804 ORTHO05D005882 8.3e-141 504.2 362 67.1
AUR62026834 Chenopodium quinoa HOM05D004804 ORTHO05D005882 2.4e-140 502.7 373 65.7
Potri.006G102700 Populus trichocarpa HOM05D004804 ORTHO05D005882 3.1e-140 502.3 366 68.0
Aa31LG5G22830 Aethionema arabicum HOM05D004804 ORTHO05D005882 4.1e-140 501.9 368 67.7
Migut.J00372 Erythranthe guttata HOM05D004804 ORTHO05D005882 4.1e-140 501.9 368 66.3
PSO339G6548 Papaver somniferum HOM05D004804 ORTHO05D005882 7.0e-140 501.1 322 72.4
DCAR_009258 Daucus carota HOM05D004804 ORTHO05D005882 1.6e-139 500.0 366 66.4
FAN14G5408 Fragaria x ananassa HOM05D004804 ORTHO05D005882 1.6e-139 500.0 363 67.8
HanXRQChr14g0453791 Helianthus annuus HOM05D004804 ORTHO05D005882 7.7e-139 497.7 376 65.2
Sp5g08760 Schrenkiella parvula HOM05D004804 ORTHO05D005882 5.0e-138 495.0 365 67.7
BcaB01g00261 Brassica carinata HOM05D004804 ORTHO05D005882 6.5e-138 494.6 338 70.7
A07p21740 Brassica napus HOM05D004804 ORTHO05D005882 3.2e-137 492.3 368 65.8
BraA09t40124Z Brassica rapa HOM05D004804 ORTHO05D005882 4.2e-137 491.9 363 66.9
PSO384G4865 Papaver somniferum HOM05D004804 ORTHO05D005882 4.2e-137 491.9 366 66.1
BolC6t37342H Brassica oleracea HOM05D004804 ORTHO05D005882 5.5e-137 491.5 367 65.9
A09p46600 Brassica napus HOM05D004804 ORTHO05D005882 1.6e-136 490.0 361 67.0
BcaC08g44637 Brassica carinata HOM05D004804 ORTHO05D005882 2.1e-136 489.6 367 65.7
C06p21540 Brassica napus HOM05D004804 ORTHO05D005882 2.1e-136 489.6 367 65.7
BraA07t29856Z Brassica rapa HOM05D004804 ORTHO05D005882 1.0e-135 487.3 369 65.6
BcaB02g07773 Brassica carinata HOM05D004804 ORTHO05D005882 1.8e-135 486.5 368 64.4
Nitab4.5_0005039g0030 Nicotiana tabacum HOM05D004804 ORTHO05D005882 8.8e-135 484.2 385 63.1
Actinidia19758 Actinidia chinensis HOM05D004804 ORTHO05D001149 3.4e-134 482.3 361 68.7
CDE08G0350 Ceratophyllum demersum HOM05D004804 ORTHO05D005882 3.4e-134 482.3 357 66.4
Nitab4.5_0004851g0050 Nicotiana tabacum HOM05D004804 ORTHO05D005882 3.4e-134 482.3 481 53.0
CSS0039312 Camellia sinensis var. sinensis HOM05D004804 ORTHO05D001149 1.7e-133 479.9 330 71.2
C08p28920 Brassica napus HOM05D004804 ORTHO05D005882 5.4e-132 474.9 364 65.4
unitig_27.g24899 Utricularia gibba HOM05D002116 ORTHO05D005882 7.0e-132 474.6 310 71.0
Zm00001eb136710 Zea mays HOM05D004804 ORTHO05D005882 3.5e-131 472.2 354 64.1
HPP92_019459 Vanilla planifolia HOM05D004804 ORTHO05D005882 7.8e-131 471.1 355 63.7
MELO3C003100.2 Cucumis melo HOM05D004804 ORTHO05D005882 2.9e-130 469.2 386 60.6
ATR0033G037 Amborella trichopoda HOM05D004804 ORTHO05D005882 4.3e-129 465.3 354 63.0
vmacro20115 Vaccinium macrocarpon HOM05D004804 ORTHO05D005882 1.2e-128 463.8 320 68.8
Sabra06G0079000 Salix brachista HOM05D004804 ORTHO05D005882 3.6e-120 435.6 277 73.3
AUR62037218 Chenopodium quinoa HOM05D004804 ORTHO05D005882 6.2e-120 434.9 337 64.4
BcaNung07017 Brassica carinata HOM05D004804 ORTHO05D005882 1.2e-118 430.6 309 69.3
AagrBONN_evm.TU.Sc2ySwM_228.1472 Anthoceros agrestis HOM05D004804 ORTHO05D005882 2.1e-112 409.8 281 66.9
SMO118G0282 Selaginella moellendorffii HOM05D004804 ORTHO05D005882 3.6e-112 409.1 294 66.0
Mapoly0001s0200 Marchantia polymorpha HOM05D004804 ORTHO05D005882 3.1e-111 406.0 319 63.3
BcaNung07160 Brassica carinata HOM05D004804 ORTHO05D005882 2.4e-108 396.4 363 59.0
BcaC07g39720 Brassica carinata HOM05D004804 ORTHO05D005882 4.3e-105 385.6 335 61.5
Sopen09g001590 Solanum pennellii HOM05D004804 ORTHO05D005882 1.6e-104 383.6 282 65.6
AUR62038459 Chenopodium quinoa HOM05D004804 ORTHO05D005882 2.3e-103 379.8 244 69.7
Pp3c10_3520 Physcomitrium patens HOM05D004804 ORTHO05D005882 1.7e-101 373.6 320 56.2
Cre05.g237400 Chlamydomonas reinhardtii HOM05D004804 ORTHO05D005882 6.4e-101 371.7 287 62.0
MCO16G320 Micromonas commoda HOM05D004804 ORTHO05D005882 5.2e-95 352.1 285 58.9
Zm00001eb028810 Zea mays HOM05D004804 ORTHO05D005882 1.7e-90 337.0 282 57.4
SMO116G0240 Selaginella moellendorffii HOM05D004804 ORTHO05D005882 2.3e-90 336.7 294 55.4
Prupe.6G249100 Prunus persica HOM05D004804 ORTHO05D005882 3.0e-90 336.3 254 64.6
Cpa.g.c31068.3 Carica papaya HOM05D004804 ORTHO05D005882 2.8e-88 329.7 258 64.0
BolC8t50494H Brassica oleracea HOM05D004804 ORTHO05D005882 2.1e-83 313.5 335 53.7
PRCOL_00004448 Prasinoderma coloniale HOM05D004804 ORTHO05D005882 3.5e-83 312.8 282 56.0
Medtr7g072350 Medicago truncatula HOM05D004804 ORTHO05D005882 7.6e-78 295.0 230 67.4
Cpa.g.c30481.1 Carica papaya HOM05D004804 ORTHO05D005882 3.5e-75 286.2 168 79.2
MD07G1084600 Malus domestica HOM05D004804 ORTHO05D005882 5.5e-68 262.3 154 75.3
MD07G1085800 Malus domestica HOM05D004804 ORTHO05D005882 2.5e-57 226.9 127 81.1
FvH4_5g27660 Fragaria vesca HOM05D004804 ORTHO05D005882 1.4e-52 211.1 127 70.9
AUR62014235 Chenopodium quinoa HOM05D004804 ORTHO05D005882 3.1e-47 193.4 337 39.2
BcaC05g25676 Brassica carinata HOM05D004804 ORTHO05D005882 5.3e-47 192.6 146 61.0
BcaC03g18267 Brassica carinata HOM05D004804 ORTHO05D005882 8.8e-42 175.3 146 56.8
FAN18G1921 Fragaria x ananassa HOM05D004804 ORTHO05D005882 4.4e-41 172.9 100 72.0
BcaC03g18268 Brassica carinata HOM05D004804 ORTHO05D005882 1.1e-39 168.3 146 56.2
SEGI_18757 Sequoiadendron giganteum HOM05D004804 ORTHO05D005882 1.1e-36 158.3 127 55.9
BcaC01g02299 Brassica carinata HOM05D004804 ORTHO05D005882 2.6e-33 147.1 146 49.3
SEGI_29945 Sequoiadendron giganteum HOM05D004804 ORTHO05D005882 4.4e-33 146.4 108 63.0
Hma1.2p1_0683F.1_g202920 Hydrangea macrophylla HOM05D004804 ORTHO05D005882 9.4e-28 128.6 72 80.6
SEGI_13543 Sequoiadendron giganteum HOM05D004804 ORTHO05D005882 8.0e-19 99.0 60 75.0
Atru.chr5.1411 Acer truncatum HOM05D004804 ORTHO05D005882 4.0e-18 96.7 93 51.6
C03p66890 Brassica napus HOM05D004804 ORTHO05D005882 3.1e-15 87.0 67 55.2
BolC3t18959H Brassica oleracea HOM05D004804 ORTHO05D005882 3.1e-15 87.0 67 55.2
MSTRG.19109 Avicennia marina HOM05D004804 ORTHO05D005882 4.1e-15 86.7 63 58.7
BolC5t30247H Brassica oleracea HOM05D003490 ORTHO05D039708 1.7e-13 81.3 44 77.3
C03p66880 Brassica napus HOM05D004804 ORTHO05D005882 3.8e-13 80.1 44 75.0
BolC3t18958H Brassica oleracea HOM05D004804 ORTHO05D005882 6.6e-13 79.3 43 76.7
Rhsim01G0214400 Rhododendron simsii HOM05D004804 ORTHO05D000007 1.2e-11 75.1 35 85.7
SGA_v2.0_scaffold594G53100 Striga asiatica HOM05D004804 ORTHO05D005882 2.8e-11 73.9 70 54.3
FAN13G1509 Fragaria x ananassa HOM05D004804 ORTHO05D022561 4.7e-11 73.2 41 73.2
RcHm_v2.0_Chr6g0244381 Rosa chinensis HOM05D004556 ORTHO05D005298 6.8e-10 69.3 38 86.8


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