Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21393 Trifolium pratense HOM05D006189 ORTHO05D007765 3.0e-102 375.2 189 100.0
TPR.G8020 Trifolium pratense HOM05D006189 ORTHO05D007765 1.8e-94 349.4 188 92.0
Medtr2g031990 Medicago truncatula HOM05D006189 ORTHO05D007765 4.4e-93 344.7 188 92.0
Ca_00927_v3 Cicer arietinum L. HOM05D006189 ORTHO05D007765 1.3e-92 343.2 188 89.4
Psat1g164320 Pisum sativum HOM05D006189 ORTHO05D007765 6.3e-92 340.9 188 88.8
arahy.Tifrunner.gnm1.ann1.HZ123V Arachis hypogaea HOM05D006189 ORTHO05D007765 1.6e-87 326.2 188 84.0
Lalb_Chr18g0058331 Lupinus albus HOM05D006189 ORTHO05D007765 6.1e-87 324.3 188 85.1
Lj6g0027485 Lotus japonicus HOM05D006189 ORTHO05D007765 1.4e-86 323.2 188 85.1
Glyma.15G135500 Glycine max HOM05D006189 ORTHO05D007765 2.3e-86 322.4 188 84.6
Glyma.09G029700 Glycine max HOM05D006189 ORTHO05D007765 6.8e-86 320.9 188 84.0
COL.COLO4_26883 Corchorus olitorius HOM05D006189 ORTHO05D007765 2.0e-85 319.3 189 83.1
arahy.Tifrunner.gnm1.ann1.4Q5DUA Arachis hypogaea HOM05D006189 ORTHO05D007765 3.4e-85 318.5 186 83.3
Phvul.006G123300 Phaseolus vulgaris HOM05D006189 ORTHO05D007765 4.4e-85 318.2 188 83.5
TAR626G0344 Trochodendron aralioides HOM05D006189 ORTHO05D007765 1.7e-84 316.2 188 81.9
VMungo0540G1817 Vigna mungo HOM05D006189 ORTHO05D007765 1.7e-84 316.2 188 83.5
Carub.0007s2069 Capsella rubella HOM05D006189 ORTHO05D007765 3.7e-84 315.1 189 78.8
BcaC09g51315 Brassica carinata HOM05D006189 ORTHO05D007765 8.3e-84 313.9 189 78.8
BolC1t01404H Brassica oleracea HOM05D006189 ORTHO05D007765 8.3e-84 313.9 189 78.8
ECA234G0756 Erigeron canadensis HOM05D006189 ORTHO05D007765 8.3e-84 313.9 189 79.4
BcaNung04155 Brassica carinata HOM05D006189 ORTHO05D007765 1.1e-83 313.5 189 78.8
C01p14490 Brassica napus HOM05D006189 ORTHO05D007765 1.1e-83 313.5 189 78.8
Thhalv10025851m.g Eutrema salsugineum HOM05D006189 ORTHO05D007765 1.1e-83 313.5 189 78.8
AL7G33390 Arabidopsis lyrata HOM05D006189 ORTHO05D007765 1.8e-83 312.8 189 78.8
BraA01t01159Z Brassica rapa HOM05D006189 ORTHO05D007765 2.4e-83 312.4 189 78.3
Manes.14G126200 Manihot esculenta HOM05D006189 ORTHO05D007765 2.4e-83 312.4 188 79.8
Sp7g18830 Schrenkiella parvula HOM05D006189 ORTHO05D007765 2.4e-83 312.4 189 78.8
A01p12170 Brassica napus HOM05D006189 ORTHO05D007765 5.4e-83 311.2 189 78.3
CiPaw.09G147800 Carya illinoinensis HOM05D006189 ORTHO05D007765 9.1e-83 310.5 188 80.9
Actinidia29243 Actinidia chinensis HOM05D006189 ORTHO05D007765 1.2e-82 310.1 189 79.9
Gohir.D02G105200 Gossypium hirsutum HOM05D006189 ORTHO05D007765 1.6e-82 309.7 189 79.9
Thecc.06G008600 Theobroma cacao HOM05D006189 ORTHO05D007765 1.6e-82 309.7 189 81.0
DCAR_005641 Daucus carota HOM05D006189 ORTHO05D007765 2.0e-82 309.3 189 78.8
Sed0000978 Sechium edule HOM05D006189 ORTHO05D007765 2.0e-82 309.3 188 80.3
Cpa.g.c30210.1 Carica papaya HOM05D006189 ORTHO05D007765 3.5e-82 308.5 188 79.3
ClCG03G008560 Citrullus lanatus HOM05D006189 ORTHO05D007765 4.5e-82 308.1 188 79.3
Aa31LG6G2850 Aethionema arabicum HOM05D006189 ORTHO05D007765 5.9e-82 307.8 188 77.7
QL04p073052 Quercus lobata HOM05D006189 ORTHO05D007765 5.9e-82 307.8 187 79.7
AT4G20760 Arabidopsis thaliana HOM05D006189 ORTHO05D007765 1.0e-81 307.0 189 77.2
RcHm_v2.0_Chr5g0018051 Rosa chinensis HOM05D006189 ORTHO05D007765 1.7e-81 306.2 189 78.8
Dinv06442 Davidia involucrata HOM05D006189 ORTHO05D007765 2.3e-81 305.8 188 80.9
Duzib235G1073 Durio zibethinus HOM05D006189 ORTHO05D007765 2.3e-81 305.8 189 78.3
Migut.M01928 Erythranthe guttata HOM05D006189 ORTHO05D007765 2.9e-81 305.4 188 77.1
Gorai.005G119400 Gossypium raimondii HOM05D006189 ORTHO05D007765 2.9e-81 305.4 189 78.8
MELO3C002872.2 Cucumis melo HOM05D006189 ORTHO05D007765 5.0e-81 304.7 188 78.7
Prupe.4G101000 Prunus persica HOM05D006189 ORTHO05D007765 5.0e-81 304.7 189 78.8
Atru.chr10.686 Acer truncatum HOM05D006189 ORTHO05D007765 8.6e-81 303.9 188 78.2
Haze_05946 Corylus avellana HOM05D006189 ORTHO05D007765 8.6e-81 303.9 188 78.7
FAN21G1916 Fragaria x ananassa HOM05D006189 ORTHO05D007765 8.6e-81 303.9 189 77.2
GSVIVG01021771001 Vitis vinifera HOM05D006189 ORTHO05D007765 8.6e-81 303.9 188 78.2
CSS0031891 Camellia sinensis var. sinensis HOM05D006189 ORTHO05D007765 1.9e-80 302.8 188 78.7
FAN16G1953 Fragaria x ananassa HOM05D006189 ORTHO05D007765 1.9e-80 302.8 189 76.7
PSO675G7004 Papaver somniferum HOM05D006189 ORTHO05D007765 2.5e-80 302.4 188 77.7
Potri.011G157300 Populus trichocarpa HOM05D006189 ORTHO05D007765 2.5e-80 302.4 188 78.7
Eucgr.D01017 Eucalyptus grandis HOM05D006189 ORTHO05D007765 3.3e-80 302.0 188 77.1
FvH4_3g11150 Fragaria vesca HOM05D006189 ORTHO05D007765 3.3e-80 302.0 189 77.2
PSO541G1785 Papaver somniferum HOM05D006189 ORTHO05D007765 4.2e-80 301.6 188 77.7
Rhsim13G0125300 Rhododendron simsii HOM05D006189 ORTHO05D007765 5.5e-80 301.2 189 77.8
SalBow8G0058 Salvia bowleyana HOM05D006189 ORTHO05D007765 5.5e-80 301.2 189 73.5
SalBow8G0354 Salvia bowleyana HOM05D006189 ORTHO05D007765 5.5e-80 301.2 189 73.5
Ciclev10016184m.g Citrus clementina HOM05D006189 ORTHO05D007765 7.2e-80 300.8 188 80.3
Cfa000769 Carpinus fangiana HOM05D006189 ORTHO05D007765 9.5e-80 300.4 188 77.7
vmacro03465 Vaccinium macrocarpon HOM05D006189 ORTHO05D007765 9.5e-80 300.4 189 77.8
MBI18_g27139_MAGBIO Magnolia biondii HOM05D006189 ORTHO05D007765 1.6e-79 299.7 188 78.2
CAN.G565.1 Capsicum annuum HOM05D006189 ORTHO05D007765 2.1e-79 299.3 189 74.1
HanXRQChr10g0296271 Helianthus annuus HOM05D006189 ORTHO05D007765 2.1e-79 299.3 189 75.1
Nitab4.5_0010673g0010 Nicotiana tabacum HOM05D006189 ORTHO05D007765 2.1e-79 299.3 189 74.1
PGSC0003DMG400028033 Solanum tuberosum HOM05D006189 ORTHO05D007765 2.1e-79 299.3 189 74.6
MD10G1243100 Malus domestica HOM05D006189 ORTHO05D007765 3.6e-79 298.5 189 77.8
Nitab4.5_0002819g0010 Nicotiana tabacum HOM05D006189 ORTHO05D007765 6.1e-79 297.7 189 74.6
TWI38G1238 Tripterygium wilfordii HOM05D006189 ORTHO05D007765 6.1e-79 297.7 188 75.5
Oeu063153.2 Olea europaea HOM05D006189 ORTHO05D007765 1.0e-78 297.0 189 74.1
FAN25G1707 Fragaria x ananassa HOM05D006189 ORTHO05D007765 1.8e-78 296.2 189 76.7
Sc24g0002570 Simmondsia chinensis HOM05D006189 ORTHO05D007765 3.0e-78 295.4 189 74.6
Solyc02g023990.3 Solanum lycopersicum HOM05D006189 ORTHO05D007765 5.2e-78 294.7 189 74.1
Cc09_g07340 Coffea canephora HOM05D006189 ORTHO05D007765 8.9e-78 293.9 189 73.5
Sopen02g006700 Solanum pennellii HOM05D006189 ORTHO05D007765 8.9e-78 293.9 189 73.5
AUR62030247 Chenopodium quinoa HOM05D006189 ORTHO05D007765 3.4e-77 292.0 188 73.4
EL10Ac9g22332 Beta vulgaris HOM05D006189 ORTHO05D007765 9.8e-77 290.4 188 73.4
MSTRG.16306 Avicennia marina HOM05D006189 ORTHO05D007765 1.3e-76 290.0 189 71.4
AUR62027598 Chenopodium quinoa HOM05D006189 ORTHO05D007765 1.3e-76 290.0 188 72.9
ATR0763G139 Amborella trichopoda HOM05D006189 ORTHO05D007765 6.3e-76 287.7 189 73.5
Lsat_1_v5_gn_5_148401 Lactuca sativa HOM05D006189 ORTHO05D007765 3.1e-75 285.4 189 73.0
arahy.Tifrunner.gnm1.ann1.5RXD5Y Arachis hypogaea HOM05D006189 ORTHO05D007765 3.5e-74 282.0 186 75.8
Nn7g37778 Nelumbo nucifera HOM05D006189 ORTHO05D007765 3.5e-74 282.0 188 73.9
Hund17667 Selenicereus undatus HOM05D006189 ORTHO05D007765 5.9e-74 281.2 189 70.4
SGA_v2.0_scaffold1G00293 Striga asiatica HOM05D006189 ORTHO05D007765 2.9e-73 278.9 181 72.9
Aqoxy1G01513 Aquilegia oxysepala HOM05D006189 ORTHO05D007765 4.3e-72 275.0 170 78.2
SEGI_07893 Sequoiadendron giganteum HOM05D006189 ORTHO05D007765 9.5e-72 273.9 188 68.6
Os12g0609500 Oryza sativa ssp. japonica HOM05D006189 ORTHO05D007765 1.2e-71 273.5 188 71.3
Gohir.A03G088500 Gossypium hirsutum HOM05D006189 ORTHO05D007765 1.6e-71 273.1 175 77.1
Lj2A337T31 Lonicera japonica HOM05D006189 ORTHO05D007765 1.4e-70 270.0 189 73.0
Sabra11G0142800 Salix brachista HOM05D006189 ORTHO05D007765 2.3e-70 269.2 253 56.9
CARHR227300 Cardamine hirsuta HOM05D006189 ORTHO05D007765 2.6e-69 265.8 158 78.5
Hma1.2p1_1192F.1_g265520 Hydrangea macrophylla HOM05D006189 ORTHO05D007765 2.6e-69 265.8 163 79.8
CDE02G4463 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 9.8e-69 263.8 189 69.8
AagrBONN_evm.TU.Sc2ySwM_228.1434 Anthoceros agrestis HOM05D006189 ORTHO05D007765 2.4e-67 259.2 188 64.9
CANSAT35G1316 Cannabis sativa HOM05D006189 ORTHO05D007765 4.1e-67 258.5 189 69.3
CsaV3_1G037630 Cucumis sativus L. HOM05D006189 ORTHO05D007765 5.0e-65 251.5 188 68.6
Ah.14g085060 Amaranthus hybridus HOM05D006189 ORTHO05D007765 3.6e-63 245.4 188 64.9
Pp3c10_7720 Physcomitrium patens HOM05D006189 ORTHO05D007765 3.6e-63 245.4 190 61.6
HPP92_015693 Vanilla planifolia HOM05D006189 ORTHO05D007765 4.0e-62 241.9 146 79.5
Mapoly0158s0008 Marchantia polymorpha HOM05D006189 ORTHO05D007765 7.5e-61 237.7 188 59.0
SMO116G0118 Selaginella moellendorffii HOM05D006189 ORTHO05D007765 1.4e-59 233.4 189 59.3
PSO541G6221 Papaver somniferum HOM05D006189 ORTHO05D007765 1.0e-57 227.3 164 72.0
Hma1.2p1_1192F.1_g265540 Hydrangea macrophylla HOM05D006189 ORTHO05D007765 3.9e-57 225.3 130 80.0
Peaxi162Scf00395g00112 Petunia axillaris HOM05D006189 ORTHO05D007765 2.8e-47 192.6 189 54.0
CDE02G2479 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 6.2e-47 191.4 128 71.9
MCO04G545 Micromonas commoda HOM05D006189 ORTHO05D007765 4.4e-45 185.3 191 47.1
Zm00001eb031410 Zea mays HOM05D006189 ORTHO05D007765 1.7e-36 156.8 108 71.3
arahy.Tifrunner.gnm1.ann1.FHXA43 Arachis hypogaea HOM05D006189 ORTHO05D007765 1.9e-35 153.3 188 46.8
PRCOL_00006144 Prasinoderma coloniale HOM05D006189 ORTHO05D007765 3.0e-33 146.0 193 40.9
unitig_92.g28182 Utricularia gibba HOM05D006189 ORTHO05D007765 4.8e-31 138.7 96 71.9
QL04p073045 Quercus lobata HOM05D006189 ORTHO05D007765 1.2e-13 80.9 51 76.5
PRCOL_00004206 Prasinoderma coloniale HOM05D006189 ORTHO05D007765 7.1e-11 71.6 169 27.8
PRCOL_00006510 Prasinoderma coloniale HOM05D006189 ORTHO05D007765 7.1e-11 71.6 195 28.7
MCO08G164 Micromonas commoda HOM05D006189 ORTHO05D007765 2.7e-10 69.7 195 26.2
MCO09G279 Micromonas commoda HOM05D006189 ORTHO05D007765 5.1e-09 65.5 134 33.6
MCO02G010 Micromonas commoda HOM05D006189 ORTHO05D007765 7.4e-08 61.6 190 25.3
Cre16.g675450 Chlamydomonas reinhardtii HOM05D006189 ORTHO05D007765 3.7e-07 59.3 181 28.7


User provided reference genes

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