Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 4.8e-71 271.2 130 100.0
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 7.4e-64 247.3 130 90.0
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 7.0e-62 240.7 126 91.3
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.2e-61 240.0 124 91.1
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 3.8e-60 235.0 129 87.6
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 5.0e-60 234.6 127 89.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.7e-55 219.5 124 81.5
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 5.9e-53 211.1 127 76.4
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 7.7e-53 210.7 122 78.7
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 2.2e-52 209.1 126 76.2
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 6.5e-52 207.6 128 74.2
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.5e-51 206.5 128 74.2
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 1.2e-50 203.4 124 76.6
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.2e-50 203.4 130 78.5
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 3.0e-49 198.7 124 74.2
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 1.5e-48 196.4 130 71.5
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 9.8e-48 193.7 125 72.8
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 3.7e-47 191.8 130 70.8
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 6.3e-47 191.0 119 75.6
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 8.3e-47 190.7 124 70.2
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 1.1e-46 190.3 118 74.6
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 1.4e-46 189.9 128 70.3
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 2.4e-46 189.1 130 69.2
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 3.1e-46 188.7 130 70.0
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 4.1e-46 188.3 132 68.2
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 4.1e-46 188.3 118 74.6
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 5.4e-46 188.0 128 68.8
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 9.1e-46 187.2 130 70.0
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.2e-45 186.8 130 68.5
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.6e-45 186.4 133 67.7
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 1.6e-45 186.4 130 68.5
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 1.6e-45 186.4 131 65.6
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 2.0e-45 186.0 128 69.5
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 2.0e-45 186.0 128 68.8
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 3.5e-45 185.3 130 68.5
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 3.5e-45 185.3 130 68.5
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 3.5e-45 185.3 130 69.2
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.3e-44 183.3 130 67.7
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.7e-44 183.0 117 70.9
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 2.3e-44 182.6 132 67.4
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 2.3e-44 182.6 118 72.0
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 3.8e-44 181.8 129 67.4
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.8e-44 181.8 132 66.7
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 8.6e-44 180.6 120 68.3
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 8.6e-44 180.6 128 68.0
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 8.6e-44 180.6 128 68.0
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 1.1e-43 180.3 118 71.2
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.5e-43 179.9 118 71.2
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 1.9e-43 179.5 117 70.9
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 1.9e-43 179.5 119 68.1
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 2.5e-43 179.1 119 67.2
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 2.5e-43 179.1 119 67.2
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.3e-43 178.7 118 69.5
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 5.5e-43 177.9 119 70.6
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 7.2e-43 177.6 122 68.9
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 9.5e-43 177.2 118 68.6
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 9.5e-43 177.2 120 66.7
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 1.6e-42 176.4 128 66.4
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 2.1e-42 176.0 124 69.4
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 2.8e-42 175.6 118 68.6
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 4.7e-42 174.9 132 67.4
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 4.7e-42 174.9 132 67.4
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 4.7e-42 174.9 132 67.4
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 4.7e-42 174.9 132 67.4
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 4.7e-42 174.9 132 67.4
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 4.7e-42 174.9 115 72.2
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 4.7e-42 174.9 130 63.8
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.0e-41 173.7 131 64.1
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 1.0e-41 173.7 118 66.9
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 1.8e-41 172.9 130 60.8
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.8e-41 172.9 120 66.7
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 2.3e-41 172.6 117 66.7
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 2.3e-41 172.6 118 66.9
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 3.0e-41 172.2 130 62.3
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 3.0e-41 172.2 132 65.9
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 3.0e-41 172.2 133 66.2
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 4.0e-41 171.8 132 65.2
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 5.2e-41 171.4 134 65.7
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 5.2e-41 171.4 132 65.2
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 6.8e-41 171.0 133 65.4
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 8.9e-41 170.6 128 64.1
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 8.9e-41 170.6 132 63.6
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.2e-40 170.2 102 75.5
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.5e-40 169.9 133 64.7
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 1.5e-40 169.9 132 62.9
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 2.0e-40 169.5 130 64.6
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.0e-40 169.5 118 65.3
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 2.6e-40 169.1 118 65.3
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 3.4e-40 168.7 129 64.3
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 4.4e-40 168.3 133 64.7
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 7.5e-40 167.5 109 70.6
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 9.8e-40 167.2 112 68.8
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 3.7e-39 165.2 104 74.0
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 4.9e-39 164.9 109 67.9
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 4.9e-39 164.9 100 74.0
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.8e-38 162.9 112 65.2
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 4.1e-38 161.8 126 63.5
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 4.1e-38 161.8 126 63.5
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 5.4e-38 161.4 100 72.0
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 9.2e-38 160.6 127 63.0
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.6e-37 159.8 166 50.6
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 2.7e-37 159.1 123 59.3
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 2.9e-36 155.6 109 67.0
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 3.8e-36 155.2 132 60.6
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 6.6e-36 154.5 108 63.9
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 1.5e-35 153.3 130 56.2
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 4.3e-35 151.8 119 60.5
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 1.6e-34 149.8 163 50.3
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 2.8e-34 149.1 108 64.8
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 4.7e-34 148.3 130 54.6
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.0e-32 142.9 132 56.8
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 2.2e-31 139.4 87 72.4
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 3.2e-30 135.6 106 60.4
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 4.1e-30 135.2 84 71.4
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 4.3e-27 125.2 86 64.0
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 9.5e-27 124.0 76 73.7
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 2.6e-24 115.9 101 49.5
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 1.7e-23 113.2 101 48.5
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 1.2e-21 107.1 101 47.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 7.8e-21 104.4 61 78.7
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 6.6e-20 101.3 61 73.8
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 1.9e-19 99.8 101 43.6
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 3.3e-19 99.0 49 91.8
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 2.8e-18 95.9 98 45.9
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 8.1e-18 94.4 61 68.9
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 2.6e-16 89.4 88 52.3
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 9.9e-16 87.4 61 63.9
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.1e-14 84.0 51 72.5
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.1e-14 84.0 68 60.3
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 3.2e-14 82.4 85 44.7
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 3.5e-13 79.0 69 55.1
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 7.8e-13 77.8 66 59.1
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 1.5e-11 73.6 57 56.1
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 2.5e-11 72.8 39 87.2
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 1.5e-08 63.5 97 32.0
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.4e-08 62.4 47 53.2
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.9e-06 56.6 61 52.5


User provided reference genes

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