Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21356 Trifolium pratense HOM05D000475 ORTHO05D011666 6.3e-105 384.0 184 100.0
TPR.G25494 Trifolium pratense HOM05D000475 ORTHO05D011666 4.2e-40 168.7 121 71.9
TPR.G40566 Trifolium pratense HOM05D000475 ORTHO05D011666 1.1e-21 107.5 118 52.5
arahy.Tifrunner.gnm1.ann1.VSZX8Y Arachis hypogaea HOM05D000475 ORTHO05D000343 1.5e-18 97.1 108 53.7
TPR.G35832 Trifolium pratense HOM05D000475 ORTHO05D000343 2.0e-18 96.7 79 64.6
TPR.G4429 Trifolium pratense HOM05D000475 ORTHO05D000343 2.0e-18 96.7 82 62.2
Medtr7g070320 Medicago truncatula HOM05D000475 ORTHO05D000343 1.4e-16 90.5 100 55.0
Solyc10g076330.3 Solanum lycopersicum HOM05D000475 ORTHO05D000343 5.5e-16 88.6 147 36.7
Ca_07698_v3 Cicer arietinum L. HOM05D000475 ORTHO05D000343 7.2e-16 88.2 79 62.0
Psat3g124320 Pisum sativum HOM05D000475 ORTHO05D000343 1.6e-15 87.0 76 61.8
DCAR_018667 Daucus carota HOM05D000475 ORTHO05D000343 2.3e-14 83.2 119 40.3
Peaxi162Scf00009g01231 Petunia axillaris HOM05D000475 ORTHO05D000343 3.3e-13 79.3 107 43.0
CAN.G629.5 Capsicum annuum HOM05D000475 ORTHO05D000343 1.7e-12 77.0 98 42.9
Nitab4.5_0000047g0200 Nicotiana tabacum HOM05D000475 ORTHO05D000343 2.8e-12 76.3 123 39.0
Lj2g0010150 Lotus japonicus HOM05D000475 ORTHO05D000343 3.7e-12 75.9 79 54.4
Aqoxy3G02479 Aquilegia oxysepala HOM05D000475 ORTHO05D000343 4.8e-12 75.5 89 46.1
Phvul.010G010600 Phaseolus vulgaris HOM05D000475 ORTHO05D011666 6.3e-12 75.1 79 54.4
TPR.G8213 Trifolium pratense HOM05D014746 ORTHO05D011720 1.4e-11 73.9 48 72.9
AT5G01660 Arabidopsis thaliana HOM05D000475 ORTHO05D000343 4.1e-11 72.4 116 38.8
TPR.G8421 Trifolium pratense HOM05D000347 ORTHO05D011666 4.1e-11 72.4 47 72.3
Lalb_Chr07g0191001 Lupinus albus HOM05D000475 ORTHO05D011666 5.3e-11 72.0 116 39.7
CAN.G1328.7 Capsicum annuum HOM05D003810 ORTHO05D004416 7.0e-11 71.6 99 42.4
CAN.G289.45 Capsicum annuum HOM05D002177 ORTHO05D004416 7.0e-11 71.6 99 43.4
QL05p049129 Quercus lobata HOM05D000475 ORTHO05D000343 1.2e-10 70.9 102 45.1
Migut.L02045 Erythranthe guttata HOM05D000475 ORTHO05D000343 2.2e-09 66.6 107 41.1
Sp6g40920 Schrenkiella parvula HOM05D000475 ORTHO05D000343 2.2e-09 66.6 100 42.0
CAN.G1057.19 Capsicum annuum HOM05D000222 ORTHO05D004416 2.9e-09 66.2 90 40.0
Thhalv10012920m.g Eutrema salsugineum HOM05D000475 ORTHO05D000343 5.0e-09 65.5 104 37.5
Rhsim03G0110100 Rhododendron simsii HOM05D000475 ORTHO05D011666 6.5e-09 65.1 123 36.6
C09p74700 Brassica napus HOM05D000475 ORTHO05D000343 1.1e-08 64.3 104 39.4
BcaNung03297 Brassica carinata HOM05D000475 ORTHO05D000343 1.5e-08 63.9 104 38.5
BolC9t60202H Brassica oleracea HOM05D000475 ORTHO05D000343 1.5e-08 63.9 104 38.5
BcaC06g31981 Brassica carinata HOM05D000475 ORTHO05D000343 1.9e-08 63.5 115 34.8
Peaxi162Scf00284g00231 Petunia axillaris HOM05D000475 ORTHO05D000343 2.5e-08 63.2 131 32.1
AL6G10390 Arabidopsis lyrata HOM05D000475 ORTHO05D000343 4.2e-08 62.4 109 37.6
A10p33760 Brassica napus HOM05D000475 ORTHO05D000343 4.2e-08 62.4 104 37.5
BraA10t45406Z Brassica rapa HOM05D000475 ORTHO05D000343 4.2e-08 62.4 104 37.5
CAN.G6.22 Capsicum annuum HOM05D000475 ORTHO05D011666 4.2e-08 62.4 103 37.9
CARHR212020 Cardamine hirsuta HOM05D000475 ORTHO05D000343 7.2e-08 61.6 106 35.8
Atru.chr8.2339 Acer truncatum HOM05D015228 ORTHO05D011666 9.4e-08 61.2 64 51.6
COL.COLO4_24866 Corchorus olitorius HOM05D000475 ORTHO05D000343 1.2e-07 60.8 162 27.2
BcaC06g31955 Brassica carinata HOM05D000389 ORTHO05D000287 1.6e-07 60.5 104 38.5
MELO3C033863.2 Cucumis melo HOM05D015228 ORTHO05D011666 2.7e-07 59.7 146 31.5
CDE07G1739 Ceratophyllum demersum HOM05D000475 ORTHO05D000343 3.6e-07 59.3 79 40.5
Eucgr.G03101 Eucalyptus grandis HOM05D000475 ORTHO05D011666 3.6e-07 59.3 87 36.8
CSS0035305 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D011666 8.0e-07 58.2 89 39.3
Glyma.18G207500 Glycine max HOM05D000475 ORTHO05D000343 8.0e-07 58.2 34 79.4
CAN.G1225.6 Capsicum annuum HOM05D000475 ORTHO05D000343 1.4e-06 57.4 89 36.0
Lj4g0019173 Lotus japonicus HOM05D000475 ORTHO05D000343 1.8e-06 57.0 159 31.4
CAN.G149.44 Capsicum annuum HOM05D000475 ORTHO05D011666 4.0e-06 55.8 94 37.2


User provided reference genes

Program Settings