Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21321 Trifolium pratense HOM05D010147 ORTHO05D006739 2.3e-248 861.7 416 100.0
TPR.G6682 Trifolium pratense HOM05D010147 ORTHO05D006739 4.7e-148 528.5 416 63.7
Medtr1g069530 Medicago truncatula HOM05D010147 ORTHO05D006739 6.4e-145 518.1 413 65.1
Medtr1g069525 Medicago truncatula HOM05D010147 ORTHO05D006739 2.7e-143 512.7 402 64.9
Medtr7g069820 Medicago truncatula HOM05D010147 ORTHO05D006739 3.3e-133 479.2 410 61.0
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.4e-131 473.8 419 58.5
TPR.G38170 Trifolium pratense HOM05D010147 ORTHO05D006739 6.8e-131 471.5 416 60.1
Medtr7g069800 Medicago truncatula HOM05D010147 ORTHO05D006739 7.5e-130 468.0 411 60.1
Medtr7g069870 Medicago truncatula HOM05D010147 ORTHO05D006739 1.9e-128 463.4 408 59.1
Medtr7g069850 Medicago truncatula HOM05D010147 ORTHO05D006739 4.3e-125 452.2 393 60.6
Ca_07680_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.6e-114 416.4 412 54.4
Medtr1g025800 Medicago truncatula HOM05D010147 ORTHO05D006739 5.1e-110 402.1 365 57.5
Medtr7g069840 Medicago truncatula HOM05D010147 ORTHO05D006739 3.4e-106 389.4 366 58.5
Ca_07674_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.3e-94 350.1 416 48.6
Ca_07681_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.6e-87 327.4 403 45.9
Ca_07683_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 6.7e-86 322.0 346 52.9
Ca_07672_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 3.3e-85 319.7 413 44.8
Ca_07673_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.6e-69 266.9 422 38.6
Lj1g0005351 Lotus japonicus HOM05D010147 ORTHO05D006739 2.2e-68 263.8 346 43.4
Lalb_Chr19g0124301 Lupinus albus HOM05D010147 ORTHO05D006739 3.3e-61 240.0 424 37.7
TPR.G6699 Trifolium pratense HOM05D010147 ORTHO05D006739 8.8e-54 215.3 164 61.6
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 4.4e-37 159.8 444 31.1
Medtr7g100490 Medicago truncatula HOM05D010147 ORTHO05D006739 2.2e-36 157.5 114 65.8
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 1.6e-34 151.4 445 30.8
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 4.0e-30 136.7 440 29.3
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 4.0e-30 136.7 454 29.1
TPR.G25164 Trifolium pratense HOM05D010147 ORTHO05D006739 1.1e-27 128.6 437 26.1
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 1.1e-24 118.6 360 30.8
FvH4_4g23711 Fragaria vesca HOM05D006368 ORTHO05D006739 1.5e-24 118.2 457 26.5
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-24 117.5 457 26.5
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.3e-24 116.7 457 28.4
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.3e-24 116.7 431 29.0
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.6e-24 116.3 431 29.0
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 5.6e-24 116.3 429 28.4
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.3e-24 115.9 420 28.1
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 2.1e-23 114.4 351 29.6
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-23 114.4 388 28.4
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 6.2e-23 112.8 420 27.9
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-22 110.9 351 29.3
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-22 110.5 391 28.6
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-21 108.6 398 28.1
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-21 108.6 380 28.9
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-21 108.6 380 28.9
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 1.5e-21 108.2 421 27.1
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 2.2e-20 104.4 420 26.9
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-20 104.0 426 26.3
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 2.9e-20 104.0 443 25.1
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.7e-20 103.6 374 29.7
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 8.3e-20 102.4 242 34.3
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 1.4e-19 101.7 428 27.1
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 1.4e-19 101.7 403 26.6
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 1.9e-19 101.3 434 27.6
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 2.4e-19 100.9 359 27.3
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.4e-19 100.9 432 25.2
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 3.2e-19 100.5 249 30.5
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.2e-19 100.5 425 26.6
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.2e-19 100.5 428 27.1
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 4.1e-19 100.1 442 25.6
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.0e-19 99.4 410 26.1
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.0e-19 99.4 298 29.9
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-18 98.6 416 27.2
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 1.6e-18 98.2 444 27.0
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-18 98.2 272 31.2
Ca_03009_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.0e-18 97.8 301 26.6
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 6.0e-18 96.3 396 28.0
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.0e-17 95.5 367 27.5
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 1.7e-17 94.7 439 23.9
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-17 93.6 442 26.2
FvH4_6g46020 Fragaria vesca HOM05D006368 ORTHO05D025547 3.3e-16 90.5 341 27.6
FAN14G1520 Fragaria x ananassa HOM05D006368 ORTHO05D025547 3.3e-16 90.5 341 27.6
FAN14G5490 Fragaria x ananassa HOM05D006368 ORTHO05D025547 3.3e-16 90.5 341 27.6
Lalb_Chr19g0133241 Lupinus albus HOM05D006368 ORTHO05D006739 3.3e-16 90.5 461 24.1
TAR636G2580 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.3e-16 90.5 375 25.6
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 4.3e-16 90.1 236 31.4
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.3e-16 90.1 201 33.8
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.6e-16 89.7 368 27.7
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.3e-16 89.4 301 27.9
SGA_v2.0_scaffold351G49652 Striga asiatica HOM05D000151 ORTHO05D000074 1.2e-15 88.6 428 24.3
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.8e-15 87.4 455 23.1
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.6e-15 87.0 264 29.2
Dinv25349 Davidia involucrata HOM05D006368 ORTHO05D006739 6.2e-15 86.3 253 28.5
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 6.2e-15 86.3 400 23.2
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 1.4e-14 85.1 292 27.4
FAN02G0248 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.4e-14 85.1 341 27.6
FAN05G1788 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.4e-14 85.1 341 27.0
Oeu017909.1 Olea europaea HOM05D000151 ORTHO05D000074 1.4e-14 85.1 395 24.8
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.1e-14 84.0 416 26.2
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 4.0e-14 83.6 262 28.2
Lj4C37G10 Lonicera japonica HOM05D000151 ORTHO05D000074 4.0e-14 83.6 380 25.5
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 5.2e-14 83.2 455 22.6
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-13 81.6 278 26.6
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-13 80.9 223 26.0
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-13 80.9 216 30.1
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.6e-13 80.9 428 23.8
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.6e-13 80.9 413 26.2
TAR636G0219 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.4e-13 80.5 176 32.4
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 5.8e-13 79.7 249 28.1
Lj2g0009806 Lotus japonicus HOM05D006368 ORTHO05D006739 5.8e-13 79.7 423 25.1
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 1.3e-12 78.6 381 24.9
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 1.7e-12 78.2 218 28.0
FAN14G3691 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-12 77.8 208 30.8
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.9e-12 76.6 387 24.8
Aqoxy5G01074 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-11 75.1 222 28.8
Manes.05G141800 Manihot esculenta HOM05D000151 ORTHO05D000074 2.4e-11 74.3 398 23.9
Duzib132G1061 Durio zibethinus HOM05D007346 ORTHO05D009044 5.4e-11 73.2 233 27.0
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.1e-11 72.8 212 31.1
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.1e-11 72.8 251 27.1
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-10 72.0 188 27.7
TWI15G0901 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.2e-10 72.0 228 28.5
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-10 72.0 420 24.0
Lj2g0002702 Lotus japonicus HOM05D006368 ORTHO05D006739 2.1e-10 71.2 436 23.6
Sed0007657 Sechium edule HOM05D000151 ORTHO05D000074 3.5e-10 70.5 417 23.0
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-09 68.6 129 37.2
FAN14G3548 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-09 67.8 175 28.0
PGSC0003DMG400046531 Solanum tuberosum HOM05D009171 ORTHO05D000440 3.0e-09 67.4 187 27.3
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-09 67.0 342 25.7
FAN04G2785 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.6e-09 65.9 172 31.4
MBI18_g40419_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.1e-08 65.5 218 27.1
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 1.5e-08 65.1 374 23.5
Cc08_g06170 Coffea canephora HOM05D000151 ORTHO05D000074 2.5e-08 64.3 143 32.2
PGSC0003DMG400045094 Solanum tuberosum HOM05D009171 ORTHO05D000440 2.5e-08 64.3 205 24.9
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 5.6e-08 63.2 133 30.1
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 9.5e-08 62.4 130 30.8
Oeu016486.1 Olea europaea HOM05D000151 ORTHO05D000074 1.2e-07 62.0 380 23.4
FAN22G0881 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.6e-07 60.5 131 35.1
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.7e-07 60.1 135 30.4
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.7e-07 60.1 135 30.4
MBI11_g05443_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 6.2e-07 59.7 131 32.8
Nn1g04037 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.8e-06 58.2 191 28.8
RcHm_v2.0_Chr4g0430571 Rosa chinensis HOM05D014495 ORTHO05D014615 1.8e-06 58.2 192 28.6
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.4e-06 57.8 428 23.1
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.4e-06 57.8 331 22.7
Cfa018639 Carpinus fangiana HOM05D000151 ORTHO05D000074 4.0e-06 57.0 127 29.1
Prupe.2G280300 Prunus persica HOM05D000151 ORTHO05D000074 4.0e-06 57.0 262 23.3
TWI56G0115 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.0e-06 57.0 212 25.9
FAN05G0916 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.8e-06 56.2 115 35.7


User provided reference genes

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