Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21214 Trifolium pratense HOM05D007533 ORTHO05D009622 6.9e-60 233.8 120 100.0
LjContig00439g0010342 Lotus japonicus HOM05D007533 ORTHO05D009622 5.8e-59 230.7 120 99.2
LjContig00439g0021951 Lotus japonicus HOM05D007533 ORTHO05D009622 5.8e-59 230.7 120 99.2
Lalb_Chr00c21g0405841 Lupinus albus HOM05D007533 ORTHO05D009622 5.5e-57 224.2 120 96.7
Lalb_Chr00c24g0407011 Lupinus albus HOM05D007533 ORTHO05D009622 5.5e-57 224.2 120 96.7
Glyma.17G185600 Glycine max HOM05D007533 ORTHO05D009622 7.1e-57 223.8 120 96.7
PGSC0003DMG400026520 Solanum tuberosum HOM05D007533 ORTHO05D009622 4.1e-52 208.0 119 87.4
Solyc00g500302.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 1.5e-51 206.1 119 87.4
Solyc11g063573.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 1.5e-51 206.1 119 87.4
Solyc00g500173.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 1.0e-50 203.4 119 86.6
Nitab4.5_0012599g0080 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.3e-50 203.0 119 86.6
CAN.G2446.3 Capsicum annuum HOM05D007533 ORTHO05D009622 2.2e-50 202.2 119 86.6
CAN.G2792.1 Capsicum annuum HOM05D007533 ORTHO05D009622 2.2e-50 202.2 119 86.6
arahy.Tifrunner.gnm1.ann1.6ILC2A Arachis hypogaea HOM05D007533 ORTHO05D009622 5.0e-50 201.1 105 97.1
arahy.Tifrunner.gnm1.ann1.R8TWAM Arachis hypogaea HOM05D007533 ORTHO05D009622 5.0e-50 201.1 105 97.1
Sopen00g001050 Solanum pennellii HOM05D007533 ORTHO05D009622 5.0e-50 201.1 119 85.7
Nn1g09978 Nelumbo nucifera HOM05D007533 ORTHO05D009622 5.5e-49 197.6 119 85.7
Nn1g10040 Nelumbo nucifera HOM05D007533 ORTHO05D009622 5.5e-49 197.6 119 85.7
Lj2P1223T74 Lonicera japonica HOM05D007533 ORTHO05D009622 7.9e-48 193.7 114 87.7
Lj2P1228T84 Lonicera japonica HOM05D007533 ORTHO05D009622 7.9e-48 193.7 114 87.7
Lj2P1231T101 Lonicera japonica HOM05D007533 ORTHO05D009622 7.9e-48 193.7 114 87.7
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 1.4e-47 193.0 119 84.0
Ah.10g028150 Amaranthus hybridus HOM05D007533 ORTHO05D009622 1.4e-47 193.0 119 84.0
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.8e-47 192.6 119 82.4
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 1.8e-47 192.6 119 81.5
MSTRG.26054 Avicennia marina HOM05D007533 ORTHO05D009622 2.3e-47 192.2 119 84.0
CANSAT16G0029 Cannabis sativa HOM05D007533 ORTHO05D009622 5.1e-47 191.0 119 84.9
Gorai.001G167400 Gossypium raimondii HOM05D007533 ORTHO05D009622 5.1e-47 191.0 120 84.2
Thhalv10023156m.g Eutrema salsugineum HOM05D007533 ORTHO05D009622 1.1e-46 189.9 114 86.8
Nitab4.5_0010333g0060 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.0e-46 189.1 111 85.6
AL9U10720 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 2.5e-46 188.7 114 86.0
RcHm_v2.0_MTg0498351 Rosa chinensis HOM05D007533 ORTHO05D009622 2.5e-46 188.7 119 83.2
PGSC0003DMG400030942 Solanum tuberosum HOM05D007533 ORTHO05D009622 2.5e-46 188.7 119 79.0
Aqoxy23s008 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 3.3e-46 188.3 119 81.5
ATMG00640 Arabidopsis thaliana HOM05D007533 ORTHO05D009622 3.3e-46 188.3 113 86.7
CAN.G1001.31 Capsicum annuum HOM05D007533 ORTHO05D009622 3.3e-46 188.3 119 80.7
DCAR_032459 Daucus carota HOM05D007533 ORTHO05D009622 7.4e-46 187.2 114 86.0
Aqoxy1G02967 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 9.7e-46 186.8 119 80.7
CsaV3_UNG210000 Cucumis sativus L. HOM05D007533 ORTHO05D009622 9.7e-46 186.8 119 83.2
Potri.007G061641 Populus trichocarpa HOM05D007533 ORTHO05D009622 1.3e-45 186.4 119 82.4
Potri.007G062602 Populus trichocarpa HOM05D007533 ORTHO05D009622 1.3e-45 186.4 119 82.4
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 1.3e-45 186.4 119 82.4
Hma1.2p1_0136F.1_g062009 Hydrangea macrophylla HOM05D007533 ORTHO05D009622 2.2e-45 185.7 113 85.8
Sed0020832 Sechium edule HOM05D007533 ORTHO05D009622 2.8e-45 185.3 120 82.5
CARHR283000 Cardamine hirsuta HOM05D007533 ORTHO05D009622 6.3e-45 184.1 114 85.1
Lsat_1_v5_gn_0_35060 Lactuca sativa HOM05D007533 ORTHO05D009622 5.3e-44 181.0 113 85.0
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 6.9e-44 180.6 109 86.2
A04p09330 Brassica napus HOM05D007533 ORTHO05D009622 2.0e-43 179.1 109 86.2
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 2.0e-43 179.1 109 86.2
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 2.0e-43 179.1 109 86.2
BraSC48t46232Z Brassica rapa HOM05D007533 ORTHO05D009622 2.0e-43 179.1 109 86.2
BraSC48t46320Z Brassica rapa HOM05D007533 ORTHO05D009622 2.0e-43 179.1 109 86.2
HanXRQChr16g0504431 Helianthus annuus HOM05D007533 ORTHO05D009622 2.6e-43 178.7 113 84.1
HanXRQMTg0579131 Helianthus annuus HOM05D007533 ORTHO05D009622 2.6e-43 178.7 113 84.1
unitig_87.g27950 Utricularia gibba HOM05D007533 ORTHO05D009622 7.7e-43 177.2 127 74.0
HanXRQChr09g0253411 Helianthus annuus HOM05D007533 ORTHO05D009622 2.2e-42 175.6 113 83.2
MBI05_g05359_MAGBIO Magnolia biondii HOM05D007533 ORTHO05D009622 2.9e-42 175.3 106 84.0
AUR62042328 Chenopodium quinoa HOM05D007533 ORTHO05D009622 3.8e-42 174.9 111 82.9
C01p34790 Brassica napus HOM05D007533 ORTHO05D009622 1.1e-41 173.3 109 82.6
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 2.6e-38 162.2 107 80.4
arahy.Tifrunner.gnm1.ann1.PN90EB Arachis hypogaea HOM05D007533 ORTHO05D009622 2.6e-38 162.2 107 80.4
Lj2P1226T70 Lonicera japonica HOM05D007533 ORTHO05D009622 9.7e-38 160.2 88 92.0
Dinv06666 Davidia involucrata HOM05D007533 ORTHO05D009622 1.1e-36 156.8 95 84.2
QL12p027939 Quercus lobata HOM05D007533 ORTHO05D009622 1.4e-36 156.4 102 77.5
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 2.0e-35 152.5 77 98.7
SalBow1G6690 Salvia bowleyana HOM05D007533 ORTHO05D009622 4.5e-35 151.4 80 95.0
Aa31csc1168G30 Aethionema arabicum HOM05D007533 ORTHO05D009622 1.7e-34 149.4 82 92.7
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 1.7e-34 149.4 79 93.7
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 5.0e-34 147.9 77 97.4
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 8.5e-34 147.1 77 96.1
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 8.5e-34 147.1 77 96.1
CARHR288330 Cardamine hirsuta HOM05D007533 ORTHO05D009622 1.4e-33 146.4 90 85.6
ATR0155G001 Amborella trichopoda HOM05D007533 ORTHO05D009622 3.2e-33 145.2 88 85.2
Aqoxy12s024 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 3.2e-33 145.2 83 89.2
Nitab4.5_0000172g1940 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.8e-31 139.4 111 66.7
CDE02G4305 Ceratophyllum demersum HOM05D007533 ORTHO05D009622 1.5e-30 136.3 74 90.5
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 6.3e-29 131.0 77 85.7
Nitab4.5_0010333g0120 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.7e-26 122.9 79 77.2
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 1.2e-24 116.7 67 86.6
HanXRQChr17g0567331 Helianthus annuus HOM05D007533 ORTHO05D009622 2.1e-24 115.9 81 77.8
SHI19535 Sapria himalayana HOM05D000105 ORTHO05D000023 1.4e-20 103.2 76 72.4
Lsat_1_v5_gn_1_118900 Lactuca sativa HOM05D007533 ORTHO05D009622 2.4e-20 102.4 73 74.0
Gohir.D01G116666 Gossypium hirsutum HOM05D007533 ORTHO05D009622 4.5e-19 98.2 62 79.0
C03p57120 Brassica napus HOM05D007533 ORTHO05D009622 3.2e-17 92.0 58 81.0
BolC3t17989H Brassica oleracea HOM05D007533 ORTHO05D009622 3.2e-17 92.0 58 81.0
CAN.G649.12 Capsicum annuum HOM05D007533 ORTHO05D009622 2.7e-16 89.0 48 89.6
Oeu041867.1 Olea europaea HOM05D007533 ORTHO05D009622 3.6e-16 88.6 47 93.6
Nitab4.5_0000172g2020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 5.2e-15 84.7 83 57.8
Nitab4.5_0000034g0140 Nicotiana tabacum HOM05D007533 ORTHO05D009622 4.4e-14 81.6 59 71.2
SHI23927 Sapria himalayana HOM05D007533 ORTHO05D009622 4.8e-13 78.2 48 79.2
Peaxi162Scf01098g00011 Petunia axillaris HOM05D007533 ORTHO05D009622 1.4e-12 76.6 46 87.0
Solyc06g042990.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 4.1e-12 75.1 68 57.4
Lsat_1_v5_gn_5_43041 Lactuca sativa HOM05D007533 ORTHO05D009622 1.6e-11 73.2 39 89.7
ATR0807G043 Amborella trichopoda HOM05D007533 ORTHO05D009622 1.1e-09 67.0 48 75.0
CDE02G0940 Ceratophyllum demersum HOM05D000131 ORTHO05D000086 2.5e-09 65.9 39 79.5
Nitab4.5_0002253g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 8.9e-07 57.4 31 80.6
GSVIVG01010884001 Vitis vinifera HOM05D007533 ORTHO05D009622 8.9e-07 57.4 48 62.5


User provided reference genes

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