Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21191 Trifolium pratense HOM05D003216 ORTHO05D002268 1.0e-221 773.1 384 100.0
TPR.G29741 Trifolium pratense HOM05D000593 ORTHO05D002268 1.0e-72 278.1 265 59.6
TPR.G19405 Trifolium pratense HOM05D003216 ORTHO05D002268 9.3e-58 228.4 205 62.0
TPR.G37709 Trifolium pratense HOM05D003216 ORTHO05D000562 6.3e-38 162.5 135 59.3
TPR.G17160 Trifolium pratense HOM05D003216 ORTHO05D002268 1.8e-32 144.4 117 65.8
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 1.5e-31 141.4 222 39.6
TPR.G3927 Trifolium pratense HOM05D003216 ORTHO05D002268 1.2e-28 131.7 105 54.3
TPR.G8671 Trifolium pratense HOM05D000593 ORTHO05D000562 1.0e-27 128.6 91 61.5
TPR.G28618 Trifolium pratense HOM05D000593 ORTHO05D000562 3.8e-27 126.7 93 59.1
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 7.7e-20 102.4 250 32.0
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 8.5e-19 99.0 192 35.4
TPR.G54 Trifolium pratense HOM05D003216 ORTHO05D002268 2.5e-18 97.4 64 62.5
TPR.G22274 Trifolium pratense HOM05D003216 ORTHO05D004526 4.7e-17 93.2 61 63.9
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 5.2e-16 89.7 171 33.9
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 8.8e-16 89.0 231 29.9
Medtr3g104430 Medicago truncatula HOM05D003216 ORTHO05D000562 2.0e-15 87.8 115 37.4
Medtr7g068370 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-15 87.8 154 37.7
TPR.G14065 Trifolium pratense HOM05D003216 ORTHO05D002268 2.6e-15 87.4 80 56.2
Medtr1g103800 Medicago truncatula HOM05D003216 ORTHO05D002268 2.2e-14 84.3 234 32.9
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 8.2e-14 82.4 199 34.2
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-13 81.6 216 32.9
Medtr3g032550 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-13 81.6 183 32.8
TPR.G8656 Trifolium pratense HOM05D003216 ORTHO05D002268 1.4e-13 81.6 137 46.0
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-13 80.9 227 32.2
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 4.1e-13 80.1 196 31.6
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.5e-12 77.0 64 51.6
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.3e-11 75.1 64 50.0
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 1.3e-11 75.1 208 30.3
TPR.G20851 Trifolium pratense HOM05D000593 ORTHO05D000562 1.3e-11 75.1 52 63.5
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.7e-11 74.7 64 50.0
Medtr1g099140 Medicago truncatula HOM05D000593 ORTHO05D000562 2.2e-11 74.3 104 36.5
Medtr2g061890 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-11 73.9 146 34.9
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 3.8e-11 73.6 178 35.4
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 8.5e-11 72.4 64 48.4
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 8.5e-11 72.4 212 31.1
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.1e-10 72.0 64 46.9
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 2.5e-10 70.9 91 39.6
Medtr2g030885 Medicago truncatula HOM05D003216 ORTHO05D002268 2.5e-10 70.9 223 31.4
Hma1.2p1_0353F.1_g133160 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 3.2e-10 70.5 93 37.6
Medtr3g467680 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-10 70.5 182 28.0
Medtr7g056013 Medicago truncatula HOM05D003216 ORTHO05D002268 4.2e-10 70.1 166 31.9
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 5.5e-10 69.7 98 37.8
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 7.2e-10 69.3 200 32.0
CSS0025640 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 9.4e-10 68.9 64 48.4
CSS0003309 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.6e-09 68.2 64 45.3
Ca_26997_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.6e-09 68.2 72 43.1
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 2.1e-09 67.8 232 28.9
Ca_05380_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.1e-09 67.8 86 34.9
Medtr1g094105 Medicago truncatula HOM05D000593 ORTHO05D000562 2.7e-09 67.4 77 45.5
CSS0048160 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.6e-09 67.0 70 45.7
Hma1.2p1_0319F.1_g123940 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 4.7e-09 66.6 93 35.5
Medtr1g081010 Medicago truncatula HOM05D003216 ORTHO05D002268 4.7e-09 66.6 178 34.3
Medtr8g468040 Medicago truncatula HOM05D003216 ORTHO05D002268 4.7e-09 66.6 191 30.9
Oeu035640.1 Olea europaea HOM05D000593 ORTHO05D000562 4.7e-09 66.6 80 38.8
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 1.0e-08 65.5 78 41.0
Ca_23377_v3 Cicer arietinum L. HOM05D000593 ORTHO05D002268 1.4e-08 65.1 201 29.4
PSO832G0356 Papaver somniferum HOM05D000593 ORTHO05D000562 1.4e-08 65.1 64 48.4
Ca_06057_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.3e-08 64.3 168 27.4
Ca_07719_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 2.3e-08 64.3 200 30.0
Ca_15677_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.3e-08 64.3 225 27.1
Ca_18398_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.3e-08 64.3 224 25.9
PSO063G7449 Papaver somniferum HOM05D000593 ORTHO05D000562 2.3e-08 64.3 99 36.4
CSS0015084 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.0e-08 63.5 64 45.3
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 4.0e-08 63.5 214 28.5
Medtr8g028025 Medicago truncatula HOM05D003216 ORTHO05D002268 4.0e-08 63.5 189 25.9
PSO063G3477 Papaver somniferum HOM05D000593 ORTHO05D000562 4.0e-08 63.5 99 37.4
TPR.G14990 Trifolium pratense HOM05D003216 ORTHO05D002268 4.0e-08 63.5 235 26.4
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 4.0e-08 63.5 64 45.3
PSO832G1919 Papaver somniferum HOM05D000593 ORTHO05D000562 5.2e-08 63.2 99 36.4
TPR.G39548 Trifolium pratense HOM05D003216 ORTHO05D002268 5.2e-08 63.2 97 45.4
Medtr1g072330 Medicago truncatula HOM05D003216 ORTHO05D002268 6.7e-08 62.8 94 39.4
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 8.8e-08 62.4 203 27.6
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 1.2e-07 62.0 215 27.4
PSO832G2496 Papaver somniferum HOM05D000593 ORTHO05D000562 1.2e-07 62.0 97 36.1
Medtr3g044770 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-07 61.6 187 28.9
Medtr8g020433 Medicago truncatula HOM05D000593 ORTHO05D004526 1.5e-07 61.6 70 45.7
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 2.6e-07 60.8 64 42.2
Ca_02694_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.6e-07 60.8 200 29.5
ECA234G4363 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.6e-07 60.8 83 41.0
TPR.G18522 Trifolium pratense HOM05D000593 ORTHO05D002268 3.3e-07 60.5 241 25.3
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 4.4e-07 60.1 64 40.6
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 4.4e-07 60.1 185 28.6
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 7.5e-07 59.3 232 28.0
EL10Ac2g02647 Beta vulgaris HOM05D000593 ORTHO05D000562 7.5e-07 59.3 65 40.0
Ca_01383_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 7.5e-07 59.3 148 32.4
Ca_13605_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 7.5e-07 59.3 188 28.7
ECA232G1583 Erigeron canadensis HOM05D000593 ORTHO05D000562 7.5e-07 59.3 80 38.8
ECA232G4650 Erigeron canadensis HOM05D000593 ORTHO05D000562 7.5e-07 59.3 83 39.8
ECA248G1631 Erigeron canadensis HOM05D000593 ORTHO05D000562 7.5e-07 59.3 83 39.8
PSO063G7547 Papaver somniferum HOM05D000593 ORTHO05D000562 7.5e-07 59.3 64 45.3
ECA233G0058 Erigeron canadensis HOM05D000593 ORTHO05D000562 9.7e-07 58.9 83 41.0
ECA240G3995 Erigeron canadensis HOM05D000593 ORTHO05D000562 9.7e-07 58.9 109 34.9
ECA247G3427 Erigeron canadensis HOM05D000593 ORTHO05D000562 9.7e-07 58.9 83 39.8
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 9.7e-07 58.9 141 29.8
PSO585G0009 Papaver somniferum HOM05D000593 ORTHO05D000562 9.7e-07 58.9 80 35.0
PSO782G4983 Papaver somniferum HOM05D000593 ORTHO05D000562 9.7e-07 58.9 76 42.1
ECA232G3502 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.3e-06 58.5 83 39.8
Gorai.009G169100 Gossypium raimondii HOM05D000593 ORTHO05D000562 1.3e-06 58.5 64 37.5
Ca_25222_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.7e-06 58.2 225 25.8
ECA238G0279 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.7e-06 58.2 87 36.8
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 1.7e-06 58.2 90 34.4
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 2.2e-06 57.8 65 38.5
Ca_20438_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.2e-06 57.8 58 48.3
ECA246G0852 Erigeron canadensis HOM05D000319 ORTHO05D002646 2.2e-06 57.8 83 39.8
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 2.2e-06 57.8 141 29.8
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 2.2e-06 57.8 141 29.8
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 2.2e-06 57.8 68 39.7
Aqoxy7G02031 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 2.8e-06 57.4 67 43.3
Ca_06728_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 2.8e-06 57.4 196 28.1
ECA234G3910 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.8e-06 57.4 83 38.6
ECA234G3992 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.8e-06 57.4 83 38.6
ECA236G0889 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.8e-06 57.4 83 38.6
ECA236G3883 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.8e-06 57.4 83 38.6
ECA246G0555 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.8e-06 57.4 83 38.6
ECA246G1394 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.8e-06 57.4 83 38.6
ECA247G3961 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.8e-06 57.4 83 38.6
ECA234G1600 Erigeron canadensis HOM05D000593 ORTHO05D000562 3.7e-06 57.0 87 36.8
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 3.7e-06 57.0 64 37.5
TWI73G0387 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.7e-06 57.0 166 28.9
ECA232G0850 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.8e-06 56.6 109 33.9
ECA240G4055 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.8e-06 56.6 109 33.9
ECA246G0792 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.8e-06 56.6 109 33.9
ECA246G4698 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.8e-06 56.6 109 33.9
ECA247G2639 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.8e-06 56.6 109 33.9
ECA248G1652 Erigeron canadensis HOM05D000282 ORTHO05D000562 4.8e-06 56.6 87 36.8
ECA248G3260 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.8e-06 56.6 109 33.9
ECA233G5937 Erigeron canadensis HOM05D000593 ORTHO05D000562 6.3e-06 56.2 83 38.6
TWI79G0388 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.3e-06 56.2 108 35.2
ECA234G1534 Erigeron canadensis HOM05D000593 ORTHO05D000562 8.2e-06 55.8 109 33.0
ECA234G1676 Erigeron canadensis HOM05D000593 ORTHO05D000562 8.2e-06 55.8 83 37.3


User provided reference genes

Program Settings