Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21115 Trifolium pratense HOM05D000193 ORTHO05D412221 9.9e-49 196.4 97 100.0
TPR.G21697 Trifolium pratense HOM05D000193 ORTHO05D000402 4.3e-28 127.9 134 56.0
Medtr8g103500 Medicago truncatula HOM05D000193 ORTHO05D000402 4.6e-22 107.8 128 50.8
Ca_17335_v3 Cicer arietinum L. HOM05D000193 ORTHO05D000402 1.3e-16 89.7 127 47.2
VMungo0251G0555 Vigna mungo HOM05D000193 ORTHO05D000402 1.0e-13 80.1 125 40.0
Phvul.002G312900 Phaseolus vulgaris HOM05D000193 ORTHO05D000402 3.0e-13 78.6 125 40.0
Haze_25720 Corylus avellana HOM05D000193 ORTHO05D000402 5.7e-12 74.3 133 37.6
Haze_25727 Corylus avellana HOM05D000193 ORTHO05D000402 9.7e-12 73.6 133 37.6
Eucgr.C03840 Eucalyptus grandis HOM05D000193 ORTHO05D000402 9.7e-12 73.6 126 37.3
Eucgr.L02540 Eucalyptus grandis HOM05D000193 ORTHO05D000402 9.7e-12 73.6 126 37.3
RcHm_v2.0_Chr2g0090361 Rosa chinensis HOM05D000193 ORTHO05D000402 1.3e-11 73.2 122 41.0
COL.COLO4_34931 Corchorus olitorius HOM05D000193 ORTHO05D000402 2.2e-11 72.4 118 38.1
MD02G1046300 Malus domestica HOM05D000193 ORTHO05D000402 2.2e-11 72.4 134 35.8
arahy.Tifrunner.gnm1.ann1.3EW3TZ Arachis hypogaea HOM05D000193 ORTHO05D000402 2.8e-11 72.0 135 38.5
Atru.chr7.1355 Acer truncatum HOM05D000193 ORTHO05D000402 4.8e-11 71.2 124 38.7
Cfa021565 Carpinus fangiana HOM05D000193 ORTHO05D000402 4.8e-11 71.2 133 36.8
FvH4_1g04760 Fragaria vesca HOM05D000193 ORTHO05D000402 4.8e-11 71.2 126 35.7
FAN19G2603 Fragaria x ananassa HOM05D000193 ORTHO05D000402 4.8e-11 71.2 126 35.7
Manes.03G021000 Manihot esculenta HOM05D000193 ORTHO05D000402 4.8e-11 71.2 128 35.9
arahy.Tifrunner.gnm1.ann1.M9595M Arachis hypogaea HOM05D000193 ORTHO05D000402 6.3e-11 70.9 135 39.3
FAN26G1886 Fragaria x ananassa HOM05D000193 ORTHO05D000402 6.3e-11 70.9 122 38.5
FAN23G1247 Fragaria x ananassa HOM05D000193 ORTHO05D000402 8.2e-11 70.5 122 37.7
FAN28G1079 Fragaria x ananassa HOM05D000193 ORTHO05D000402 1.1e-10 70.1 122 37.7
Atru.chr7.1356 Acer truncatum HOM05D000193 ORTHO05D000402 4.1e-10 68.2 123 37.4
QL02p085265 Quercus lobata HOM05D000193 ORTHO05D000402 1.5e-09 66.2 133 36.8
CiPaw.04G163800 Carya illinoinensis HOM05D000193 ORTHO05D000402 2.0e-09 65.9 138 37.0
Duzib168G0298 Durio zibethinus HOM05D000193 ORTHO05D000402 2.0e-09 65.9 121 33.1
HanXRQChr12g0355591 Helianthus annuus HOM05D000193 ORTHO05D000402 2.0e-09 65.9 127 33.9
Migut.K00454 Erythranthe guttata HOM05D000193 ORTHO05D000402 3.4e-09 65.1 121 37.2
Gohir.D06G061500 Gossypium hirsutum HOM05D000193 ORTHO05D000402 3.4e-09 65.1 129 34.9
Gorai.010G071400 Gossypium raimondii HOM05D000193 ORTHO05D000402 3.4e-09 65.1 129 34.9
Oeu055339.1 Olea europaea HOM05D000193 ORTHO05D000402 3.4e-09 65.1 131 35.9
Prupe.7G231500 Prunus persica HOM05D000193 ORTHO05D000402 4.5e-09 64.7 130 33.8
TWI34G0539 Tripterygium wilfordii HOM05D000193 ORTHO05D000402 4.5e-09 64.7 128 35.9
Hund09207 Selenicereus undatus HOM05D000193 ORTHO05D000402 7.6e-09 63.9 130 36.9
Medtr6g088450 Medicago truncatula HOM05D000193 ORTHO05D000402 1.0e-08 63.5 122 32.8
PSO832G1045 Papaver somniferum HOM05D000193 ORTHO05D000402 1.0e-08 63.5 128 35.2
Actinidia20372 Actinidia chinensis HOM05D000193 ORTHO05D000402 1.3e-08 63.2 129 35.7
MELO3C025345.2 Cucumis melo HOM05D000193 ORTHO05D000402 1.3e-08 63.2 120 35.8
Duzib187G1102 Durio zibethinus HOM05D000193 ORTHO05D000402 1.3e-08 63.2 129 33.3
Gohir.D05G019300 Gossypium hirsutum HOM05D000193 ORTHO05D000402 1.3e-08 63.2 125 33.6
Gorai.009G019700 Gossypium raimondii HOM05D000193 ORTHO05D000402 1.3e-08 63.2 125 33.6
vmacro20703 Vaccinium macrocarpon HOM05D000193 ORTHO05D000402 1.3e-08 63.2 120 32.5
PGR102G1135 Punica granatum HOM05D000193 ORTHO05D000402 1.7e-08 62.8 127 33.1
PGSC0003DMG400004419 Solanum tuberosum HOM05D000193 ORTHO05D000402 1.7e-08 62.8 120 34.2
unitig_748.g7156 Utricularia gibba HOM05D000193 ORTHO05D000402 1.7e-08 62.8 122 34.4
CiPaw.04G163700 Carya illinoinensis HOM05D000193 ORTHO05D000402 2.2e-08 62.4 129 31.8
Sc08g0007540 Simmondsia chinensis HOM05D000193 ORTHO05D000402 2.2e-08 62.4 122 36.1
CSS0028875 Camellia sinensis var. sinensis HOM05D000193 ORTHO05D000402 2.9e-08 62.0 132 33.3
CsaV3_1G024230 Cucumis sativus L. HOM05D000193 ORTHO05D000402 2.9e-08 62.0 120 35.8
QL02p085247 Quercus lobata HOM05D000193 ORTHO05D000402 2.9e-08 62.0 136 32.4
Solyc07g024030.3 Solanum lycopersicum HOM05D000193 ORTHO05D000402 2.9e-08 62.0 120 33.3
SHI02762 Sapria himalayana HOM05D000193 ORTHO05D000402 3.8e-08 61.6 131 32.8
ClCG06G008560 Citrullus lanatus HOM05D000193 ORTHO05D000402 5.0e-08 61.2 123 33.3
Ciclev10008031m.g Citrus clementina HOM05D000193 ORTHO05D000402 5.0e-08 61.2 133 30.1
Sopen07g012400 Solanum pennellii HOM05D000193 ORTHO05D000402 5.0e-08 61.2 120 33.3
Eucgr.C03836 Eucalyptus grandis HOM05D000193 ORTHO05D000402 6.5e-08 60.8 130 30.0
MD15G1184500 Malus domestica HOM05D000193 ORTHO05D000402 6.5e-08 60.8 126 31.7
EL10Ac8g18490 Beta vulgaris HOM05D000193 ORTHO05D000402 8.5e-08 60.5 122 35.2
CSS0033880 Camellia sinensis var. sinensis HOM05D000193 ORTHO05D000402 8.5e-08 60.5 130 34.6
Eucgr.C01038 Eucalyptus grandis HOM05D000193 ORTHO05D000402 8.5e-08 60.5 127 31.5
Gohir.A06G063000 Gossypium hirsutum HOM05D000193 ORTHO05D000402 8.5e-08 60.5 127 33.9
Manes.16G115700 Manihot esculenta HOM05D000193 ORTHO05D000402 1.1e-07 60.1 128 32.0
Hund26197 Selenicereus undatus HOM05D000193 ORTHO05D000402 1.4e-07 59.7 122 35.2
Gohir.A05G018400 Gossypium hirsutum HOM05D000193 ORTHO05D000402 1.9e-07 59.3 125 32.0
Thecc.09G109900 Theobroma cacao HOM05D000193 ORTHO05D000402 1.9e-07 59.3 129 33.3
CANSAT56G3437 Cannabis sativa HOM05D000193 ORTHO05D000402 2.5e-07 58.9 132 35.6
Sabra06G0123800 Salix brachista HOM05D000193 ORTHO05D000402 2.5e-07 58.9 126 32.5
Sed0001628 Sechium edule HOM05D000193 ORTHO05D000402 2.5e-07 58.9 122 32.8
Sed0020499 Sechium edule HOM05D000193 ORTHO05D000402 2.5e-07 58.9 124 33.1
GSVIVG01015387001 Vitis vinifera HOM05D000193 ORTHO05D000402 2.5e-07 58.9 122 32.0
Glyma.07G086000 Glycine max HOM05D000193 ORTHO05D000402 3.2e-07 58.5 133 32.3
Lj4P458T31 Lonicera japonica HOM05D000193 ORTHO05D000402 3.2e-07 58.5 121 29.8
Lj4P460T36 Lonicera japonica HOM05D000193 ORTHO05D000402 3.2e-07 58.5 121 29.8
MSTRG.26422 Avicennia marina HOM05D000193 ORTHO05D000402 4.2e-07 58.2 125 36.8
AUR62010988 Chenopodium quinoa HOM05D000193 ORTHO05D000402 4.2e-07 58.2 123 35.0
AUR62021499 Chenopodium quinoa HOM05D000193 ORTHO05D000402 4.2e-07 58.2 123 35.0
Dinv36635 Davidia involucrata HOM05D000193 ORTHO05D000402 4.2e-07 58.2 137 30.7
Eucgr.C03839 Eucalyptus grandis HOM05D000193 ORTHO05D000402 4.2e-07 58.2 126 30.2
Manes.03G021100 Manihot esculenta HOM05D000193 ORTHO05D000402 4.2e-07 58.2 124 31.5
Peaxi162Scf00231g00016 Petunia axillaris HOM05D000193 ORTHO05D000402 4.2e-07 58.2 131 30.5
Haze_25721 Corylus avellana HOM05D000193 ORTHO05D000402 5.5e-07 57.8 127 32.3
Haze_25728 Corylus avellana HOM05D000193 ORTHO05D000402 5.5e-07 57.8 127 32.3
Prupe.7G231600 Prunus persica HOM05D000193 ORTHO05D000402 5.5e-07 57.8 133 30.8
Hma1.2p1_0018F.1_g013580 Hydrangea macrophylla HOM05D000193 ORTHO05D000402 7.2e-07 57.4 84 38.1
PGR102G2872 Punica granatum HOM05D000193 ORTHO05D000402 7.2e-07 57.4 124 30.6
Duzib150G0017 Durio zibethinus HOM05D000193 ORTHO05D000402 9.3e-07 57.0 127 30.7
Thecc.09G109800 Theobroma cacao HOM05D000193 ORTHO05D000402 9.3e-07 57.0 128 31.2
BraA03t15506Z Brassica rapa HOM05D000193 ORTHO05D000402 1.2e-06 56.6 110 32.7
MBI01_g06515_MAGBIO Magnolia biondii HOM05D000193 ORTHO05D000402 1.2e-06 56.6 131 32.8
Ciclev10007938m.g Citrus clementina HOM05D000193 ORTHO05D000402 1.6e-06 56.2 126 31.0
Eucgr.C03362 Eucalyptus grandis HOM05D000193 ORTHO05D000402 1.6e-06 56.2 133 29.3
Lalb_Chr14g0371521 Lupinus albus HOM05D000193 ORTHO05D000402 1.6e-06 56.2 125 32.0
SalBow1G3315 Salvia bowleyana HOM05D000193 ORTHO05D000402 1.6e-06 56.2 120 35.0
DCAR_028708 Daucus carota HOM05D000193 ORTHO05D000402 2.1e-06 55.8 126 30.2
Potri.006G158700 Populus trichocarpa HOM05D000193 ORTHO05D000402 2.1e-06 55.8 122 32.0
THA.LOC104819792 Tarenaya hassleriana HOM05D000193 ORTHO05D000402 2.1e-06 55.8 135 26.7
Cfa021564 Carpinus fangiana HOM05D000193 ORTHO05D000402 2.7e-06 55.5 127 31.5
ATR0315G119 Amborella trichopoda HOM05D000193 ORTHO05D000402 3.6e-06 55.1 120 31.7
Cc06_g09700 Coffea canephora HOM05D000193 ORTHO05D000402 3.6e-06 55.1 127 34.6
THA.LOC104811112 Tarenaya hassleriana HOM05D000193 ORTHO05D000402 4.6e-06 54.7 124 30.6
TWI34G1353 Tripterygium wilfordii HOM05D000193 ORTHO05D000402 4.6e-06 54.7 123 31.7
Psat1g042840 Pisum sativum HOM05D000193 ORTHO05D000402 7.9e-06 53.9 124 30.6
Rhsim01G0095000 Rhododendron simsii HOM05D000193 ORTHO05D000402 7.9e-06 53.9 124 27.4
THA.LOC104807444 Tarenaya hassleriana HOM05D000193 ORTHO05D000402 7.9e-06 53.9 135 27.4


User provided reference genes

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