Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 5.3e-55 218.8 277 100.0
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 2.3e-50 203.4 277 93.9
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 4.2e-44 182.6 280 80.7
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 6.3e-40 168.7 284 71.1
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 4.2e-36 156.0 280 72.9
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 8.0e-35 151.8 282 66.0
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 8.0e-35 151.8 277 69.7
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 8.0e-35 151.8 280 73.9
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 1.8e-34 150.6 194 91.2
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.8e-34 150.6 280 62.9
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 1.7e-32 144.1 283 74.6
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.2e-32 143.7 283 70.7
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 2.8e-32 143.3 280 76.1
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 3.7e-32 142.9 283 69.6
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 6.3e-32 142.1 279 73.1
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 6.3e-32 142.1 281 79.4
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 1.1e-31 141.4 306 66.3
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 1.4e-31 141.0 281 75.4
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 9.1e-31 138.3 193 82.9
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 4.5e-30 136.0 283 71.4
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 5.9e-30 135.6 283 70.0
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 2.2e-29 133.7 275 73.5
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 2.2e-29 133.7 280 69.3
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 5.0e-29 132.5 282 76.2
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.9e-28 130.6 195 82.6
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 4.2e-28 129.4 195 72.8
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 2.1e-27 127.1 304 65.5
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 2.7e-27 126.7 277 65.0
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 3.6e-27 126.3 281 69.0
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.4e-26 124.4 279 65.6
Glyma.08G186200 Glycine max HOM05D003347 ORTHO05D003821 3.0e-26 123.2 280 72.9
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 4.0e-26 122.9 283 71.0
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 4.0e-26 122.9 280 66.4
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 6.8e-26 122.1 278 64.0
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 1.2e-25 121.3 195 80.5
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 3.4e-25 119.8 194 75.3
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 4.4e-25 119.4 278 73.7
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.3e-24 117.9 190 63.2
Glyma.15G046600 Glycine max HOM05D003347 ORTHO05D003821 1.7e-24 117.5 280 71.8
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 2.2e-24 117.1 271 70.8
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 4.8e-24 115.9 194 71.1
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 1.1e-23 114.8 293 56.0
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.8e-23 114.0 278 60.8
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 3.1e-23 113.2 274 67.9
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 4.1e-23 112.8 196 76.0
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 5.4e-23 112.5 278 69.4
Duzib248G0125 Durio zibethinus HOM05D003347 ORTHO05D003821 1.6e-22 110.9 283 70.0
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 5.0e-21 105.9 174 69.0
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 6.5e-21 105.5 194 75.8
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 1.5e-20 104.4 195 69.2
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.9e-20 104.0 275 54.5
Prupe.1G568600 Prunus persica HOM05D003347 ORTHO05D003821 3.2e-20 103.2 304 69.7
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 4.2e-20 102.8 158 92.4
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 1.2e-19 101.3 271 69.4
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.8e-19 100.1 195 57.4
CiPaw.06G147300 Carya illinoinensis HOM05D003347 ORTHO05D003821 2.8e-19 100.1 194 73.7
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 2.8e-19 100.1 280 73.9
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 4.7e-19 99.4 194 63.9
RcHm_v2.0_Chr5g0049401 Rosa chinensis HOM05D003347 ORTHO05D003821 4.7e-19 99.4 196 78.6
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 4.7e-19 99.4 270 51.1
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 8.0e-19 98.6 194 71.1
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 1.0e-18 98.2 283 58.3
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 4.0e-18 96.3 158 88.0
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 4.0e-18 96.3 194 64.9
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 4.0e-18 96.3 192 61.5
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 8.8e-18 95.1 196 75.0
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 8.8e-18 95.1 276 62.0
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 2.0e-17 94.0 158 76.6
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 2.6e-17 93.6 313 50.2
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 3.4e-17 93.2 285 52.3
TWI23G0580 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 5.7e-17 92.4 194 75.8
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 7.5e-17 92.0 195 62.1
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 9.8e-17 91.7 188 66.0
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 1.7e-16 90.9 157 82.2
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 1.7e-16 90.9 193 57.0
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 2.2e-16 90.5 201 58.7
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 2.2e-16 90.5 200 62.5
Potri.001G211000 Populus trichocarpa HOM05D003347 ORTHO05D003821 4.9e-16 89.4 280 66.8
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 6.3e-16 89.0 200 58.5
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 8.3e-16 88.6 197 78.7
Nn1g08766 Nelumbo nucifera HOM05D003347 ORTHO05D003821 1.4e-15 87.8 277 64.3
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.4e-15 87.8 189 58.7
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 2.4e-15 87.0 157 71.3
Solyc01g104160.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 2.4e-15 87.0 133 85.0
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 3.1e-15 86.7 188 68.6
FAN16G0856 Fragaria x ananassa HOM05D003347 ORTHO05D003821 3.1e-15 86.7 307 64.5
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 4.1e-15 86.3 289 61.9
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 4.1e-15 86.3 201 66.7
FAN25G2408 Fragaria x ananassa HOM05D003347 ORTHO05D003821 5.4e-15 85.9 303 70.6
FAN21G3803 Fragaria x ananassa HOM05D003347 ORTHO05D003821 9.2e-15 85.1 196 77.0
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 2.0e-14 84.0 276 68.5
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 5.9e-14 82.4 195 61.0
FAN11G2552 Fragaria x ananassa HOM05D003347 ORTHO05D003821 5.9e-14 82.4 196 76.0
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 7.7e-14 82.0 196 61.7
C05p09260 Brassica napus HOM05D003347 ORTHO05D003821 1.3e-13 81.3 194 62.9
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 2.9e-13 80.1 158 67.7
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 2.9e-13 80.1 158 67.7
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 3.8e-13 79.7 207 68.6
FvH4_3g26951 Fragaria vesca HOM05D003347 ORTHO05D003821 5.0e-13 79.3 305 69.2
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 6.6e-13 79.0 181 63.0
Nitab4.5_0003344g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.1e-12 78.2 134 78.4
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 1.5e-12 77.8 269 63.9
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 2.5e-12 77.0 182 39.0
vmacro19891 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 3.3e-12 76.6 195 68.7
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 5.6e-12 75.9 165 52.1
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 5.6e-12 75.9 72 62.5
Carub.0001s1045 Capsella rubella HOM05D003347 ORTHO05D003821 7.3e-12 75.5 196 63.8
SEGI_15810 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 9.5e-12 75.1 194 67.0
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.2e-11 74.7 154 63.6
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 1.2e-11 74.7 196 63.3
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 2.1e-11 73.9 157 66.9
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.8e-11 73.6 185 66.5
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 6.1e-11 72.4 190 60.0
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.0e-10 71.6 179 63.1
Cpa.g.sc113.60 Carica papaya HOM05D003347 ORTHO05D003821 1.4e-10 71.2 195 65.6
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 3.0e-10 70.1 158 68.4
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 6.8e-10 68.9 155 64.5
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 8.9e-10 68.6 188 62.2
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.2e-09 68.2 104 50.0
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.2e-09 68.2 70 77.1
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.5e-09 67.8 155 67.1
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.5e-09 67.8 155 65.2
Aa31LG1G3970 Aethionema arabicum HOM05D003347 ORTHO05D003821 3.4e-09 66.6 134 62.7
Ciclev10002126m.g Citrus clementina HOM05D003347 ORTHO05D003821 3.4e-09 66.6 195 66.2
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 4.4e-09 66.2 69 58.0
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 5.7e-09 65.9 47 76.6
Manes.12G147600 Manihot esculenta HOM05D003347 ORTHO05D003821 5.7e-09 65.9 178 74.7
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 5.7e-09 65.9 160 70.0
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 5.7e-09 65.9 69 58.0
Pp3c9_6610 Physcomitrium patens HOM05D003347 ORTHO05D003821 7.5e-09 65.5 284 56.7
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 7.5e-09 65.5 276 56.9
COL.COLO4_17865 Corchorus olitorius HOM05D003347 ORTHO05D003821 1.3e-08 64.7 108 65.7
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 1.3e-08 64.7 160 54.4
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.3e-08 64.7 108 55.6
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 2.2e-08 63.9 98 60.2
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 2.2e-08 63.9 110 59.1
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 2.9e-08 63.5 72 70.8
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 4.9e-08 62.8 72 56.9
Prupe.4G280500 Prunus persica HOM05D003347 ORTHO05D003821 6.4e-08 62.4 103 67.0
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 6.4e-08 62.4 71 66.2
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 8.3e-08 62.0 70 58.6
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 8.3e-08 62.0 47 70.2
Nitab4.5_0000816g0010 Nicotiana tabacum HOM05D003347 ORTHO05D003821 8.3e-08 62.0 225 58.2
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 1.1e-07 61.6 187 54.0
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 1.4e-07 61.2 187 59.9
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 1.8e-07 60.8 69 52.2
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 2.4e-07 60.5 196 59.2
MELO3C023199.2 Cucumis melo HOM05D003347 ORTHO05D003821 3.2e-07 60.1 95 69.5
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 5.4e-07 59.3 84 54.8
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 5.4e-07 59.3 71 64.8
Aa31LG11G7390 Aethionema arabicum HOM05D012923 ORTHO05D014747 7.0e-07 58.9 194 53.6
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 7.0e-07 58.9 315 45.4
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 7.0e-07 58.9 156 57.1
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 7.0e-07 58.9 164 65.2
Nitab4.5_0013117g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.6e-06 57.8 72 68.1
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 2.0e-06 57.4 87 47.1
ECA248G0339 Erigeron canadensis HOM05D003347 ORTHO05D003821 3.5e-06 56.6 44 70.5
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 7.8e-06 55.5 71 49.3


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