Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 3.4e-158 561.6 282 100.0
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 1.5e-134 483.0 285 83.5
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 1.2e-131 473.4 278 85.3
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 7.1e-124 447.6 274 81.8
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 2.2e-120 436.0 284 78.5
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 4.1e-119 431.8 278 80.6
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 3.4e-118 428.7 277 79.1
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 2.9e-117 425.6 278 78.8
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 9.4e-116 420.6 288 74.0
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 5.1e-114 414.8 289 73.4
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 9.7e-113 410.6 276 76.8
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 7.7e-110 401.0 271 71.6
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 1.3e-109 400.2 272 74.3
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.0e-106 390.6 267 73.4
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 3.0e-106 389.0 267 73.0
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 5.1e-106 388.3 279 68.5
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 6.7e-106 387.9 274 69.7
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 8.8e-106 387.5 273 70.7
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 1.5e-105 386.7 264 74.6
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 1.5e-105 386.7 266 70.3
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 2.0e-105 386.3 259 76.1
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 3.3e-105 385.6 280 70.4
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 5.7e-105 384.8 275 69.8
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 2.2e-104 382.9 263 73.0
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 2.8e-104 382.5 278 69.1
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 1.1e-103 380.6 280 68.6
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.8e-103 379.8 273 69.2
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 3.1e-103 379.0 272 70.2
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 3.1e-103 379.0 272 70.2
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 4.1e-103 378.6 263 73.0
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.1e-103 378.6 263 73.0
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 5.3e-103 378.3 259 74.5
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 9.1e-103 377.5 275 69.5
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 9.1e-103 377.5 260 71.5
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.2e-102 377.1 269 70.6
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 1.2e-102 377.1 270 69.3
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 3.5e-102 375.6 273 67.8
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.5e-102 375.2 263 72.6
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 5.9e-102 374.8 280 68.2
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 5.9e-102 374.8 269 69.5
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.0e-101 374.0 269 68.8
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.3e-101 373.6 275 68.4
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 5.0e-101 371.7 273 68.9
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 5.0e-101 371.7 263 71.5
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 6.5e-101 371.3 278 68.3
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 8.5e-101 370.9 267 70.0
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 8.5e-101 370.9 275 68.7
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.9e-100 369.8 263 71.5
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 2.5e-100 369.4 274 66.8
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 2.5e-100 369.4 274 66.8
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 9.4e-100 367.5 267 69.3
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 2.1e-99 366.3 271 68.6
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 3.6e-99 365.5 341 58.7
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 3.6e-99 365.5 267 68.9
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 8.0e-99 364.4 263 70.0
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 1.0e-98 364.0 272 67.3
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 1.0e-98 364.0 272 67.3
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.0e-98 364.0 267 68.5
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 1.8e-98 363.2 272 67.3
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 1.8e-98 363.2 262 70.6
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 5.2e-98 361.7 278 64.4
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 5.7e-97 358.2 295 64.4
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 3.7e-96 355.5 259 68.0
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 8.2e-96 354.4 269 67.7
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.8e-95 353.2 264 69.3
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 5.3e-95 351.7 269 66.5
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 7.7e-94 347.8 266 67.3
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 7.7e-94 347.8 258 69.8
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 1.7e-93 346.7 282 66.0
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 2.9e-93 345.9 266 67.7
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 8.5e-93 344.4 260 67.3
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.2e-91 340.5 274 63.5
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.6e-91 340.1 263 65.0
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 2.1e-91 339.7 291 64.6
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 3.6e-91 339.0 291 65.3
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 1.0e-90 337.4 262 66.4
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 2.3e-90 336.3 257 66.5
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 4.0e-90 335.5 261 65.9
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 5.7e-89 331.6 273 67.0
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 5.7e-89 331.6 273 67.0
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 5.7e-89 331.6 261 65.9
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 7.5e-89 331.3 273 66.7
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 2.2e-88 329.7 275 64.7
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 2.8e-88 329.3 270 67.0
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 6.3e-88 328.2 262 66.4
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.3e-85 320.5 274 57.3
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 5.0e-85 318.5 257 63.8
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 3.6e-83 312.4 257 61.5
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 2.2e-80 303.1 261 59.8
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 3.5e-78 295.8 193 72.5
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 5.9e-78 295.0 183 83.6
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 4.4e-73 278.9 169 78.1
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 9.8e-73 277.7 179 76.5
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 2.9e-72 276.2 181 74.0
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 3.9e-61 239.2 161 72.0
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 5.6e-60 235.3 283 45.9
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.2e-59 234.2 162 70.4
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 8.1e-59 231.5 173 66.5
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.2e-57 227.6 135 79.3
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 4.6e-54 215.7 268 47.0
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 4.6e-54 215.7 268 46.3
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.8e-50 203.8 267 48.3
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 8.9e-50 201.4 151 68.2
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 3.7e-48 196.1 269 43.9
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 9.6e-44 181.4 212 47.6
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.9e-39 167.2 275 40.4
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 3.3e-36 156.4 277 38.3
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.5e-28 130.2 126 57.9
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 3.3e-28 129.8 93 67.7
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.3e-27 127.9 78 76.9
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 4.9e-24 115.9 164 40.2
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 6.0e-22 109.0 79 70.9
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.3e-19 101.3 173 39.9
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.5e-17 94.4 264 30.7
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 4.5e-17 92.8 65 66.2
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.6e-14 82.8 179 36.3
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 4.3e-12 76.3 84 48.8


User provided reference genes

Program Settings