Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21024 Trifolium pratense HOM05D007884 ORTHO05D009968 6.5e-207 724.2 465 100.0
Psat1g062080 Pisum sativum HOM05D007884 ORTHO05D009968 2.9e-138 496.1 469 70.8
Medtr6g017035 Medicago truncatula HOM05D007884 ORTHO05D009968 2.5e-134 483.0 461 72.2
Lj2g0010779 Lotus japonicus HOM05D007884 ORTHO05D009968 1.9e-113 413.7 468 60.5
Lalb_Chr02g0158331 Lupinus albus HOM05D007884 ORTHO05D009968 2.2e-101 373.6 463 65.7
VMungo1309G1853 Vigna mungo HOM05D007884 ORTHO05D009968 4.4e-86 322.8 486 53.7
Glyma.19G044700 Glycine max HOM05D007884 ORTHO05D009968 7.7e-83 312.0 475 53.7
Phvul.003G017800 Phaseolus vulgaris HOM05D007884 ORTHO05D009968 2.2e-82 310.5 482 52.7
Ca_26346_v3 Cicer arietinum L. HOM05D007884 ORTHO05D009968 3.4e-62 243.4 272 50.4
CiPaw.03G016000 Carya illinoinensis HOM05D007884 ORTHO05D009968 1.4e-55 221.5 376 49.7
Haze_13924 Corylus avellana HOM05D007884 ORTHO05D009968 3.5e-51 206.8 373 42.9
Cfa008093 Carpinus fangiana HOM05D007884 ORTHO05D009968 6.0e-51 206.1 373 34.6
Dinv09394 Davidia involucrata HOM05D007884 ORTHO05D009968 4.0e-47 193.4 373 50.7
QL09p002129 Quercus lobata HOM05D007884 ORTHO05D009968 4.0e-47 193.4 377 32.6
Duzib177G0356 Durio zibethinus HOM05D007884 ORTHO05D009968 2.6e-46 190.7 444 48.4
Prupe.1G544500 Prunus persica HOM05D007884 ORTHO05D009968 2.9e-45 187.2 372 37.6
Thecc.08G176500 Theobroma cacao HOM05D007884 ORTHO05D009968 3.8e-45 186.8 439 42.8
Sabra19G0086300 Salix brachista HOM05D007884 ORTHO05D009968 1.9e-44 184.5 393 38.2
Potri.019G075900 Populus trichocarpa HOM05D007884 ORTHO05D009968 4.1e-44 183.3 443 30.5
TWI75G0081 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 1.6e-43 181.4 443 49.0
Hma1.2p1_0004F.1_g003780 Hydrangea macrophylla HOM05D007884 ORTHO05D009968 4.6e-43 179.9 480 41.7
Ciclev10019950m.g Citrus clementina HOM05D007884 ORTHO05D009968 7.8e-43 179.1 391 51.4
Eucgr.F02657 Eucalyptus grandis HOM05D007884 ORTHO05D009968 4.3e-41 173.3 371 48.5
Lj9P699T19 Lonicera japonica HOM05D007884 ORTHO05D009968 7.3e-41 172.6 370 49.7
MD08G1213200 Malus domestica HOM05D007884 ORTHO05D009968 2.1e-40 171.0 379 47.0
TAR383G0946 Trochodendron aralioides HOM05D007884 ORTHO05D009968 2.1e-40 171.0 369 45.8
Actinidia29389 Actinidia chinensis HOM05D007884 ORTHO05D009968 1.4e-39 168.3 348 50.0
PGSC0003DMG400013578 Solanum tuberosum HOM05D007884 ORTHO05D009968 3.1e-39 167.2 375 46.4
ClCG10G005030 Citrullus lanatus HOM05D007884 ORTHO05D009968 4.0e-39 166.8 416 42.1
Gohir.A07G085300 Gossypium hirsutum HOM05D007884 ORTHO05D009968 2.0e-38 164.5 474 35.0
Gohir.D07G090700 Gossypium hirsutum HOM05D007884 ORTHO05D009968 2.6e-38 164.1 474 36.7
Gorai.001G097200 Gossypium raimondii HOM05D007884 ORTHO05D009968 2.6e-38 164.1 474 36.3
Nitab4.5_0005550g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 5.8e-38 162.9 372 45.7
Nitab4.5_0006974g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 7.6e-38 162.5 372 37.1
Sopen07g021970 Solanum pennellii HOM05D007884 ORTHO05D009968 1.3e-37 161.8 368 47.0
CANSAT25G3642 Cannabis sativa HOM05D007884 ORTHO05D009968 1.7e-37 161.4 495 33.3
CAN.G63.2 Capsicum annuum HOM05D007884 ORTHO05D009968 4.9e-37 159.8 368 45.1
Oeu023202.1 Olea europaea HOM05D007884 ORTHO05D009968 6.4e-37 159.5 369 49.1
Nn3g17503 Nelumbo nucifera HOM05D007884 ORTHO05D009968 2.4e-36 157.5 374 51.3
PGR031G2984 Punica granatum HOM05D007884 ORTHO05D009968 2.4e-36 157.5 365 37.3
Nn4g26038 Nelumbo nucifera HOM05D007884 ORTHO05D009968 3.2e-36 157.1 374 51.1
DCAR_014075 Daucus carota HOM05D007884 ORTHO05D009968 4.2e-36 156.8 369 41.7
Sc26g0002320 Simmondsia chinensis HOM05D007884 ORTHO05D009968 4.6e-35 153.3 379 43.5
COL.COLO4_22419 Corchorus olitorius HOM05D007884 ORTHO05D009968 1.0e-34 152.1 348 42.8
PSO242G0004 Papaver somniferum HOM05D007884 ORTHO05D009968 1.3e-34 151.8 378 46.6
CsaV3_4G033680 Cucumis sativus L. HOM05D007884 ORTHO05D009968 2.3e-34 151.0 377 39.5
Cc11_g04640 Coffea canephora HOM05D007884 ORTHO05D009968 1.6e-32 144.8 366 26.5
MBI04_g00944_MAGBIO Magnolia biondii HOM05D007884 ORTHO05D009968 1.1e-31 142.1 222 36.5
AUR62022398 Chenopodium quinoa HOM05D007884 ORTHO05D009968 1.8e-31 141.4 411 42.3
Ah.05g168770 Amaranthus hybridus HOM05D007884 ORTHO05D009968 9.0e-31 139.0 462 40.3
Aqoxy7G02021 Aquilegia oxysepala HOM05D007884 ORTHO05D009968 3.4e-30 137.1 370 37.0
EL10Ac1g01640 Beta vulgaris HOM05D007884 ORTHO05D009968 1.7e-29 134.8 472 38.6
Lsat_1_v5_gn_4_133080 Lactuca sativa HOM05D007884 ORTHO05D009968 1.1e-28 132.1 367 46.0
Sed0007017 Sechium edule HOM05D007884 ORTHO05D009968 1.9e-28 131.3 494 25.3
TWI18G0215 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 3.2e-28 130.6 341 27.6
MSTRG.1590 Avicennia marina HOM05D007884 ORTHO05D009968 4.2e-28 130.2 371 40.2
HanXRQChr17g0559001 Helianthus annuus HOM05D007884 ORTHO05D009968 1.2e-27 128.6 385 40.5
HPP92_008446 Vanilla planifolia HOM05D007884 ORTHO05D009968 6.0e-27 126.3 367 44.7
CSS0033652 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 1.9e-25 121.3 378 41.5
CSS0035845 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 1.9e-25 121.3 378 41.5
FvH4_5g33340 Fragaria vesca HOM05D007884 ORTHO05D009968 9.6e-25 119.0 203 33.5
FAN18G0070 Fragaria x ananassa HOM05D007884 ORTHO05D009968 9.6e-25 119.0 203 33.5
MELO3C016698.2 Cucumis melo HOM05D007884 ORTHO05D009968 1.8e-23 114.8 324 37.3
Atru.chr13.2470 Acer truncatum HOM05D007884 ORTHO05D009968 2.0e-22 111.3 284 54.9
SGA_v2.0_scaffold118G32599 Striga asiatica HOM05D007884 ORTHO05D009968 4.5e-22 110.2 371 38.8
HPP92_008463 Vanilla planifolia HOM05D007884 ORTHO05D009968 4.5e-22 110.2 369 40.1
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 7.6e-22 109.4 391 24.0
Migut.C01368 Erythranthe guttata HOM05D007884 ORTHO05D009968 9.9e-22 109.0 341 39.0
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 2.9e-21 107.5 207 31.4
Manes.18G118701 Manihot esculenta HOM05D007884 ORTHO05D009968 5.5e-20 103.2 287 45.6
Cpa.g.sc21.77 Carica papaya HOM05D007884 ORTHO05D009968 1.0e-18 99.0 279 43.7
Os03g0119700 Oryza sativa ssp. japonica HOM05D007884 ORTHO05D009968 3.9e-18 97.1 362 24.0
AUR62043537 Chenopodium quinoa HOM05D007884 ORTHO05D009968 5.1e-18 96.7 291 46.7
FAN04G3024 Fragaria x ananassa HOM05D007884 ORTHO05D009968 4.3e-17 93.6 205 30.2
ATR0716G085 Amborella trichopoda HOM05D007884 ORTHO05D009968 1.4e-15 88.6 363 48.2
ECA232G0955 Erigeron canadensis HOM05D007884 ORTHO05D009968 1.7e-13 81.6 284 51.8
FAN08G1312 Fragaria x ananassa HOM05D007884 ORTHO05D009968 8.4e-13 79.3 129 34.9
CDE04G2395 Ceratophyllum demersum HOM05D007884 ORTHO05D009968 1.2e-11 75.5 251 45.4
SEGI_24584 Sequoiadendron giganteum HOM05D000424 ORTHO05D000355 3.4e-06 57.4 201 25.4


User provided reference genes

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